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Bug #6584 ยป wraymond.8.6.xml

Example EML file with mismatched references - Matt Jones, 08/12/2014 10:54 AM

 
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<?xml version="1.0" encoding="UTF-8"?>
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<eml:eml packageId="wraymond.8.6" system="knb" xmlns:eml="eml://ecoinformatics.org/eml-2.1.1" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="eml://ecoinformatics.org/eml-2.1.1 eml.xsd">  <access authSystem="knb" order="allowFirst"><allow><principal>uid=ginnyeckert,o=unaffiliated,dc=ecoinformatics,dc=org</principal>
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<permission>read</permission>
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</allow>
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<allow><principal>uid=znhoyt,o=unaffiliated,dc=ecoinformatics,dc=org</principal>
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<permission>all</permission>
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</allow>
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<allow><principal>uid=wraymond,o=unaffiliated,dc=ecoinformatics,dc=org</principal>
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<permission>all</permission>
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</allow>
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</access>
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<dataset>  <title>Sea otter recolonization and interactions with commercially important macroinvertebrates in southeast Alaska: Forage</title>
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<creator id="1406745296625"><individualName><givenName>Zachary</givenName>
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<surName>Hoyt</surName>
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</individualName>
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<organizationName>Universitry of Alaska-Fairbanks</organizationName>
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<positionName>Phd canidate</positionName>
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<electronicMailAddress>znhoyt@alaska.edu</electronicMailAddress>
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</creator>
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<creator id="1406745305233"><individualName><givenName>Verena</givenName>
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<surName>Gill</surName>
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</individualName>
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<organizationName>United States Fish and Wildlife Service</organizationName>
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<positionName>Marine Mammals Biologist -  sea otters</positionName>
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<electronicMailAddress>verena_gill@fws.gov</electronicMailAddress>
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</creator>
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<creator><references>1406745319865</references>
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</creator>
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<associatedParty id="1406745341099"><individualName><givenName>Wendel</givenName>
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<surName>Raymond</surName>
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</individualName>
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<organizationName>University of Alaska-Fairbanks</organizationName>
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<electronicMailAddress>wendel.raymond@gmail.com</electronicMailAddress>
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<role>Metadata Technitian</role>
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</associatedParty>
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<associatedParty><references>1406745305233</references>
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<role>Advisor</role>
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</associatedParty>
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<associatedParty id="1407801666467"><individualName><salutation>Dr.</salutation>
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<givenName>M. Tim</givenName>
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<surName>Tinker</surName>
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</individualName>
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<organizationName>U.S. Geological Survey and University of California Santa Cruz</organizationName>
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<positionName>Research Wildlife Biologist and Adjunct Professor</positionName>
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<electronicMailAddress>ttinker@ucsc.edu</electronicMailAddress>
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<role>Analysis Consultant</role>
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</associatedParty>
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  <abstract><para>This data is part of the study NPRB Project 1012 &quot;Sea otter recolonization and interactions with commercially important macroinvertebrates in southeast Alaska&quot;. This is a MS Excel dataset. The data consists of observations made of foraging sea otters and samples taken from selected sea otter prey species.  We conducted foraging observations of tagged sea otters in previously unoccupied habitat, to determine the contirbution to the diet, near Kake.  Kake is currently undergoing an immigration of sea otters, and the prey species that otters target may shift as they enter previously unoccupied habitat. Observers used questar field spotting scopes and binoculars to identify prey. Location is noted as the observed coordinates of the foraging sea otter observed. Date, local time, dive duration, success, prey type, prey size, prey number, handling time and surface time are all recorded. The time interval includes 2010-2012.</para>
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</abstract>
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<keywordSet><keyword>Sea Otter</keyword>
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<keyword>Dungeness crab</keyword>
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<keyword>California sea cucumber</keyword>
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<keyword>Forage</keyword>
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<keyword>Prey</keyword>
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<keyword>Enhydra lutris</keyword>
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</keywordSet>
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<intellectualRights><para>No restriction for accessing this dataset.</para>
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</intellectualRights>
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   <coverage>     <geographicCoverage><geographicDescription>Kake Alaska, USA; Fredrick Sound</geographicDescription>
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<boundingCoordinates><westBoundingCoordinate>-134.75</westBoundingCoordinate>
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<eastBoundingCoordinate>-133.375</eastBoundingCoordinate>
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<northBoundingCoordinate>57.75</northBoundingCoordinate>
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<southBoundingCoordinate>56.375</southBoundingCoordinate>
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</boundingCoordinates>
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</geographicCoverage>
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<temporalCoverage><rangeOfDates><beginDate><calendarDate>2010-05-23</calendarDate>
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</beginDate>
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<endDate><calendarDate>2010-08-31</calendarDate>
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</endDate>
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</rangeOfDates>
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</temporalCoverage>
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<temporalCoverage><rangeOfDates><beginDate><calendarDate>2011-06-13</calendarDate>
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</beginDate>
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<endDate><calendarDate>2011-08-29</calendarDate>
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</endDate>
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</rangeOfDates>
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</temporalCoverage>
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<temporalCoverage><rangeOfDates><beginDate><calendarDate>2012-03-15</calendarDate>
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</beginDate>
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<endDate><calendarDate>2012-09-06</calendarDate>
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</endDate>
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</rangeOfDates>
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</temporalCoverage>
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<taxonomicCoverage><taxonomicClassification><taxonRankName>Genus</taxonRankName>
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<taxonRankValue>Enhyrda</taxonRankValue>
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<taxonomicClassification><taxonRankName>Species</taxonRankName>
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<taxonRankValue>lutris</taxonRankValue>
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</taxonomicClassification>
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</taxonomicClassification>
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<taxonomicClassification><taxonRankName>Genus</taxonRankName>
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<taxonRankValue>Haliotis</taxonRankValue>
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<taxonomicClassification><taxonRankName>Species</taxonRankName>
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<taxonRankValue>kamtschatkana</taxonRankValue>
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</taxonomicClassification>
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</taxonomicClassification>
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<taxonomicClassification><taxonRankName>Genus</taxonRankName>
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<taxonRankValue>Mesocentrotus</taxonRankValue>
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<taxonomicClassification><taxonRankName>Species</taxonRankName>
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<taxonRankValue>franciscanus</taxonRankValue>
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</taxonomicClassification>
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</taxonomicClassification>
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<taxonomicClassification><taxonRankName>Genus</taxonRankName>
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<taxonRankValue>Metacarcinus</taxonRankValue>
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<taxonomicClassification><taxonRankName>Species</taxonRankName>
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<taxonRankValue>magister</taxonRankValue>
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</taxonomicClassification>
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</taxonomicClassification>
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<taxonomicClassification><taxonRankName>Genus</taxonRankName>
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<taxonRankValue>Panopea</taxonRankValue>
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<taxonomicClassification><taxonRankName>Species</taxonRankName>
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<taxonRankValue>generosa</taxonRankValue>
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</taxonomicClassification>
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</taxonomicClassification>
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<taxonomicClassification><taxonRankName>Genus</taxonRankName>
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<taxonRankValue>Paralithodes</taxonRankValue>
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<taxonomicClassification><taxonRankName>Species</taxonRankName>
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<taxonRankValue>camtschaticus</taxonRankValue>
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</taxonomicClassification>
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</taxonomicClassification>
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<taxonomicClassification><taxonRankName>Genus</taxonRankName>
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<taxonRankValue>Parastichopus</taxonRankValue>
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<taxonomicClassification><taxonRankName>Species</taxonRankName>
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<taxonRankValue>californicus</taxonRankValue>
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</taxonomicClassification>
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</taxonomicClassification>
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</taxonomicCoverage>
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</coverage>
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<contact id="1406745319865"><individualName><salutation>Dr.</salutation>
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<givenName>Ginny</givenName>
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<surName>Eckert</surName>
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</individualName>
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<organizationName>University of Alaska-Fairbanks</organizationName>
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<positionName>Professor</positionName>
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<electronicMailAddress>gleckert@alaska.edu</electronicMailAddress>
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</contact>
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<contact><references>1406745296625</references>
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</contact>
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<methods><methodStep><description><section><title>Sea otter forage observations</title>
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<para>Experienced observers made detailed observations on marked or unmarked foraging sea otters,within 750 meters of terrestrial vantage points. Using binoculars, Questar spotting scopes and stopwatches, the observers followed single otters through successive dives. They recorded the apparent sex and age of the focal otter, the start and end time of observations, as well as dive times, surface intervals, foraging success and the type, number and size of prey captured. Handling time for prey consumption and portion lost if any was also recorded.</para>
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</section>
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</description>
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<instrumentation>Questar Field Model  x 40 power telescope</instrumentation>
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</methodStep>
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<methodStep><description><section><title>Prey sampling</title>
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<para>When available prey were hand selected from the intertidal or subtidal using SCUBA from our study site. Between 10-34 prey invidivuals of each species or taxonomic class were sampled and processed. The processing removed unedible portions of the specimein (e.g. clam shells, urchin spines) that sea otter do not consume. Each prey sample was weighed to the nearest 1/10th of a gram and recorded. When sea otter prey species could not be collected from our study site, samples where obtained from collaborators from Glacier Bay, Alaska.</para>
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</section>
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</description>
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</methodStep>
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</methods>
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   <project><title>Sea otter recolonization and interactions with commercially important macroinvertebrates in southeast Alaska</title>
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<personnel><references>1406745296625</references>
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<role>Author</role>
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</personnel>
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<personnel><references>1406745319865</references>
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<role>co-Principal Investigator</role>
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</personnel>
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<personnel><references>1406745305233</references>
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<role>co-Principal Investigator</role>
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</personnel>
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<personnel id="1406745330857"><individualName><givenName>Allison</givenName>
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<surName>Rice</surName>
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</individualName>
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<organizationName>University of Alaska-Fairbanks</organizationName>
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<electronicMailAddress>aarice@alaska.edu</electronicMailAddress>
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</personnel>
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<personnel><references>1406745341099</references>
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<role>Metadata Technitian</role>
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</personnel>
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<funding><para>North Pacific Research Board Project  #1012</para>
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</funding>
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</project>
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  <dataTable id="1406746638634"><entityName>prey_SSEAK_1_biomass.csv</entityName>
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 <physical id="1406746262859"><objectName>prey_SSEAK_1_biomass.csv</objectName>
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 <size unit="byte">16267</size>
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 <dataFormat><textFormat><numHeaderLines>1</numHeaderLines>
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 <recordDelimiter>#x0A</recordDelimiter>
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 <attributeOrientation>column</attributeOrientation>
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 <simpleDelimited><fieldDelimiter>,u</fieldDelimiter>
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 </simpleDelimited>
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 </textFormat>
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 </dataFormat>
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 <distribution><online><url>ecogrid://knb/znhoyt.9.2</url>
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 </online>
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 </distribution>
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 </physical>
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 <attributeList><attribute id="1406746638635"><attributeName>Prey</attributeName>
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 <attributeDefinition>Code defining name of prey species or category</attributeDefinition>
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 <measurementScale><nominal><nonNumericDomain><textDomain><definition>Codes defiend in &quot;PreyName&quot; column</definition>
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 </textDomain>
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 </nonNumericDomain>
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 </nominal>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638636"><attributeName>1A</attributeName>
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 <attributeDefinition>Size class denoting 1/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638637"><attributeName>1B</attributeName>
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 <attributeDefinition>Size class denoting 2/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638638"><attributeName>1C</attributeName>
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 <attributeDefinition>Size class denoting 3/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638639"><attributeName>2A</attributeName>
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 <attributeDefinition>Size class denoting 4/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638640"><attributeName>2B</attributeName>
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 <attributeDefinition>Size class denoting 5/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638641"><attributeName>2C</attributeName>
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 <attributeDefinition>Size class denoting 6/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638642"><attributeName>3A</attributeName>
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 <attributeDefinition>Size class denoting 7/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638643"><attributeName>3B</attributeName>
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 <attributeDefinition>Size class denoting 8/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638644"><attributeName>3C</attributeName>
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 <attributeDefinition>Size class denoting 9/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638645"><attributeName>4A</attributeName>
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 <attributeDefinition>Size class denoting 10/3 of one otter paw</attributeDefinition>
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 <measurementScale><ratio><unit><standardUnit>kilogram</standardUnit>
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 </unit>
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 <numericDomain><numberType>real</numberType>
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 </numericDomain>
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 </ratio>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638646"><attributeName>PreyName</attributeName>
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 <attributeDefinition>Full common and/or species name of prey item</attributeDefinition>
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 <measurementScale><nominal><nonNumericDomain><textDomain><definition>definition of &quot;Prey&quot; column</definition>
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 </textDomain>
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 </nonNumericDomain>
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 </nominal>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638647"><attributeName>Class</attributeName>
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 <attributeDefinition>Code for class of prey species</attributeDefinition>
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 <measurementScale><nominal><nonNumericDomain><textDomain><definition>Defined in &quot;ClassName&quot; column</definition>
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 </textDomain>
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 </nonNumericDomain>
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 </nominal>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638648"><attributeName>ClassName</attributeName>
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 <attributeDefinition>descriptor of prey class</attributeDefinition>
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 <measurementScale><nominal><nonNumericDomain><textDomain><definition>definition of &quot;Class&quot; column</definition>
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 </textDomain>
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 </nonNumericDomain>
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 </nominal>
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 </measurementScale>
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 </attribute>
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 <attribute id="1406746638649"><attributeName>Source</attributeName>
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 <attributeDefinition>refrence location for prey class</attributeDefinition>
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 <measurementScale><nominal><nonNumericDomain><textDomain><definition>contact for details</definition>
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 </textDomain>
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 </nonNumericDomain>
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 </nominal>
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 </measurementScale>
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 </attribute>
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 </attributeList>
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 <numberOfRecords>78</numberOfRecords>
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 </dataTable>
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 </dataset>
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 </eml:eml>
    (1-1/1)