[run] Find missing entries for module kepler [run] Find missing entries for module outreach [run] Find missing entries for module apple-extensions [run] Find missing entries for module r [run] org/ecoinformatics/seek/R/RExpression2.java [run] Find missing entries for module loader [run] Find missing entries for module display-redirect [run] au/edu/jcu/kepler/hydrant/ImageDisplayReplacement.java [run] Find missing entries for module actors [run] com/numericsolutions/geomodeltools/DensityGridActor.java [run] org/ROADnet/OrbLogger.java [run] org/ROADnet/OrbPacketChannelExtractor.java [run] org/ROADnet/OrbSensorDataSource.java [run] org/ROADnet/QAQC.java [run] org/ROADnet/RecordToObject.java [run] org/camera/service/AverageGenomeSizeParserV2.java [run] org/camera/service/CAMERAResourceMonitor.java [run] org/camera/service/FastaValidation.java [run] org/camera/service/Fastq2Fasta.java [run] org/camera/service/IdSizeMapForSeqFile.java [run] org/cipres/kepler/MatrixAligner.java [run] org/dart/matlab/MatlabExpression.java [run] org/ecoinformatics/seek/backprop/BackProp.java [run] org/ecoinformatics/seek/gis/grass/GrassExportActor.java [run] org/ecoinformatics/seek/gis/grass/GrassImportActor.java [run] org/ecoinformatics/seek/taxon/GetTaxa.java [run] org/ecoinformatics/seek/util/DoubleFieldChooser.java [run] org/ecoinformatics/seek/util/FieldChooser.java [run] org/ecoinformatics/seek/util/IntegerFieldChooser.java [run] org/ecoinformatics/seek/util/SequenceToTrigger.java [run] org/geon/ConstOnce.java [run] org/geon/DatabaseAccessor.java [run] org/geon/FileExists.java [run] org/geon/FileToString.java [run] org/geon/Interpolate.java [run] org/geon/InvokeService.java [run] org/geon/Scp.java [run] org/geon/URLExists.java [run] org/kepler/actor/ArrayFilter.java [run] org/kepler/actor/gsissh/ExecGsisshCmd.java [run] org/kepler/actor/io/ArrayOfRecordsWriter.java [run] org/kepler/actor/io/ParameterSetter.java [run] org/kepler/actor/io/SshDirectoryList.java [run] org/kepler/actor/job/GenericJobReconnect.java [run] org/kepler/data/conversion/ArrayOfRecordsToRecordOfArrays.java [run] org/kepler/data/conversion/binary/EnsembleActor.java [run] org/kepler/data/netcdf/NetCDFReader.java [run] org/kepler/data/netcdf/NetCDFWriter.java [run] org/kepler/dataproxy/datasource/geon/GEONDatabaseResource.java [run] org/kepler/dataproxy/datasource/geon/GEONShpResource.java [run] org/kepler/domains/SDF4WS.java [run] org/kepler/objectmanager/cache/DataCacheGetActor.java [run] org/kepler/objectmanager/cache/DataCachePutActor.java [run] org/kepler/sms/actors/MergeActor.java [run] org/nees/CreateUniqueFile.java [run] org/resurgence/actor/FileArrayPrinter.java [run] org/resurgence/actor/PermanentStringConstant.java [run] org/sdm/spa/CommandLine.java [run] org/sdm/spa/CommandLineExec.java [run] org/sdm/spa/DelayStreamToASpecificElement.java [run] org/sdm/spa/FASTACounter.java [run] org/sdm/spa/MatchDisplay.java [run] org/sdm/spa/MessageBasedWebService.java [run] org/sdm/spa/ProcessFileRT.java [run] org/sdm/spa/Repeat.java [run] org/sdm/spa/StringConst.java [run] org/sdm/spa/StringReverse.java [run] org/sdm/spa/TextualInteractionShell.java [run] org/sdm/spa/WebServiceStub.java [run] org/sdm/spa/XMLUpdater.java [run] org/sdm/spa/actors/io/DirectoryCreate.java [run] org/sdm/spa/actors/piw/viz/VizActor.java [run] org/skidlkit/TextFileReader.java [run] org/srb/SRBDisconnect.java [run] org/surge/RecordMerger.java [run] org/surge/RecordToStrings.java [run] org/surge/StringsToRecord.java [run] Find missing entries for module directors [run] Find missing entries for module opendap [run] org/kepler/dataproxy/datasource/opendap/OpendapDataSourceODC.java [run] Find missing entries for module dataturbine [run] org/kepler/data/datasource/dataturbine/DataTurbineWriter.java [run] Find missing entries for module ecogrid [run] org/ecoinformatics/seek/ecogrid/quicksearch/ResultRecord.java [run] Find missing entries for module authentication-gui [run] Find missing entries for module gui [run] *** Attempting to get ResourceBundle for SVG defaults *** [run] *** svgRenderingMethod = SVG_BATIK_RENDERING *** [run] Find missing entries for module module-manager-gui [run] Find missing entries for module authentication [run] test/org/kepler/authentication/test/AuthActor.java [run] Find missing entries for module repository [run] Find missing entries for module job [run] Find missing entries for module io [run] Find missing entries for module ssh [run] Find missing entries for module data-handling [run] Find missing entries for module sms [run] Find missing entries for module component-library [run] Find missing entries for module util [run] LIBPATH: {/Users/cxh/src/kepler/r/lib:/Users/cxh/src/kepler/common/lib:/Users/cxh/src/kepler/common/lib/ptolemy/matlab} [run] util/KeplerImageReader.java [run] util/LineReader.java [run] Find missing entries for module event-state [run] Find missing entries for module core [run] org/kepler/moml/CompositeClassEntity.java [run] Find missing entries for module common [run] Find missing entries for module module-manager [run] Find missing entries for module configuration-manager [run] Find missing entries for module kepler-tasks I did not check the above. [run] Find missing entries for module ptolemy [run] ptolemy/actor/AtomicActor.java [run] ptolemy/actor/CompositeActor.java [run] ptolemy/actor/Director.java [run] ptolemy/actor/DoNothingDirector.java [run] ptolemy/actor/LazyTypedCompositeActor.java [run] ptolemy/actor/TypeAttribute.java [run] ptolemy/actor/TypeOpaqueCompositeActor.java [run] ptolemy/actor/TypedAtomicActor.java [run] ptolemy/actor/corba/CorbaActorClient.java [run] ptolemy/actor/corba/PullConsumer.java [run] ptolemy/actor/corba/PullSupplier.java [run] ptolemy/actor/corba/PushConsumer.java [run] ptolemy/actor/corba/PushSupplier.java [run] ptolemy/actor/corba/TaskCoordinator.java [run] ptolemy/actor/corba/TaskReceiver.java [run] ptolemy/actor/corba/TaskReporter.java [run] ptolemy/actor/gt/AtomicActorMatcher.java [run] ptolemy/actor/gt/CompositeActorMatcher.java [run] ptolemy/actor/gt/Constraint.java [run] ptolemy/actor/gt/ContainerIgnoringAttribute.java [run] ptolemy/actor/gt/DefaultDirectoryAttribute.java [run] ptolemy/actor/gt/DefaultModelAttribute.java [run] ptolemy/actor/gt/FSMMatcher.java [run] ptolemy/actor/gt/GTParameter.java [run] ptolemy/actor/gt/HierarchyFlatteningAttribute.java [run] ptolemy/actor/gt/IterativeParameter.java [run] ptolemy/actor/gt/MoMLGenerator.java [run] ptolemy/actor/gt/ModalModelMatcher.java [run] ptolemy/actor/gt/ModelCombine.java [run] ptolemy/actor/gt/ModelExecutor.java [run] ptolemy/actor/gt/ModelGenerator.java [run] ptolemy/actor/gt/ModelView.java [run] ptolemy/actor/gt/Pattern.java [run] ptolemy/actor/gt/RelationCollapsingAttribute.java [run] ptolemy/actor/gt/RelationHidingAttribute.java [run] ptolemy/actor/gt/Replacement.java [run] ptolemy/actor/gt/StateMatcher.java [run] ptolemy/actor/gt/TransformationMode.java [run] ptolemy/actor/gt/TransformationRule.java [run] ptolemy/actor/gt/controller/ModelParameter.java [run] ptolemy/actor/gui/LiveLink.java [run] ptolemy/actor/gui/LocationAttribute.java [run] ptolemy/actor/gui/PasswordAttribute.java [run] ptolemy/actor/gui/SizeAttribute.java [run] ptolemy/actor/gui/WindowPropertiesAttribute.java [run] ptolemy/actor/gui/test/TestModel.java I put an X next to ones that should be included in Kepler X [run] ptolemy/actor/lib/ArrayAccumulate.java X [run] ptolemy/actor/lib/ArrayContains.java X [run] ptolemy/actor/lib/ArrayElementAsMatrix.java X [run] ptolemy/actor/lib/ArrayRemoveElement.java X [run] ptolemy/actor/lib/ArraySum.java X [run] ptolemy/actor/lib/ArrayToMatrix.java X [run] ptolemy/actor/lib/ArrayUpdate.java X [run] ptolemy/actor/lib/BooleanSelect.java X [run] ptolemy/actor/lib/BusAssembler.java X [run] ptolemy/actor/lib/BusDisassembler.java [run] ptolemy/actor/lib/ClassWrapper.java X [run] ptolemy/actor/lib/Clock.java X [run] ptolemy/actor/lib/Commutator.java X [run] ptolemy/actor/lib/ComputeHistogram.java X [run] ptolemy/actor/lib/ConfigurationSelect.java X [run] ptolemy/actor/lib/ConfigurationSwitch.java [run] ptolemy/actor/lib/CurrentMicrostep.java X [run] ptolemy/actor/lib/DB.java X [run] ptolemy/actor/lib/DelayStart.java X [run] ptolemy/actor/lib/Discard.java X [run] ptolemy/actor/lib/DiscreteClock.java [run] ptolemy/actor/lib/DoubleReader.java X [run] ptolemy/actor/lib/ExecutionTime.java X [run] ptolemy/actor/lib/Exit.java [run] ptolemy/actor/lib/FileWriter.java [run] ptolemy/actor/lib/GetCausalityInterface.java [run] ptolemy/actor/lib/GradientAdaptiveLattice.java X [run] ptolemy/actor/lib/IIR.java X [run] ptolemy/actor/lib/Lattice.java X [run] ptolemy/actor/lib/LevinsonDurbin.java [run] ptolemy/actor/lib/LimitedFiringSource.java X [run] ptolemy/actor/lib/LinearDifferenceEquationSystem.java X [run] ptolemy/actor/lib/MathFunction.java X [run] ptolemy/actor/lib/MatrixToArray.java X [run] ptolemy/actor/lib/MaxIndex.java X [run] ptolemy/actor/lib/MicrostepDelay.java X [run] ptolemy/actor/lib/MovingAverage.java X [run] ptolemy/actor/lib/MovingMaximum.java X [run] ptolemy/actor/lib/Multiplexor.java X [run] ptolemy/actor/lib/OrderedMerge.java X [run] ptolemy/actor/lib/PhaseUnwrap.java X [run] ptolemy/actor/lib/PoissonClock.java X [run] ptolemy/actor/lib/Publisher.java X [run] ptolemy/actor/lib/PublisherNonStrictTest.java X [run] ptolemy/actor/lib/PublisherTest.java X [run] ptolemy/actor/lib/Pulse.java X [run] ptolemy/actor/lib/RandomInteger.java [run] ptolemy/actor/lib/Reader.java X [run] ptolemy/actor/lib/RecursiveLattice.java X [run] ptolemy/actor/lib/RemoveNilTokens.java X [run] ptolemy/actor/lib/ResettableTimer.java X [run] ptolemy/actor/lib/RunningMaximum.java X [run] ptolemy/actor/lib/RunningMinimum.java [run] ptolemy/actor/lib/Sampler.java X [run] ptolemy/actor/lib/Sequence.java X [run] ptolemy/actor/lib/SequenceSource.java X [run] ptolemy/actor/lib/Sequencer.java X [run] ptolemy/actor/lib/SequentialClock.java X [run] ptolemy/actor/lib/SingleEvent.java X [run] ptolemy/actor/lib/SingleTokenCommutator.java X [run] ptolemy/actor/lib/SubMatrix.java X [run] ptolemy/actor/lib/Subscriber.java X [run] ptolemy/actor/lib/SubscriptionAggregator.java X [run] ptolemy/actor/lib/Synchronizer.java [run] ptolemy/actor/lib/TestExceptionHandler.java X [run] ptolemy/actor/lib/TimeDelay.java [run] ptolemy/actor/lib/TimedSource.java X [run] ptolemy/actor/lib/TopLevelCurrentTime.java [run] ptolemy/actor/lib/Transformer.java X [run] ptolemy/actor/lib/Triangular.java [run] ptolemy/actor/lib/TriggeredClock.java X [run] ptolemy/actor/lib/URLDirectoryReader.java X [run] ptolemy/actor/lib/UnaryMathFunction.java X [run] ptolemy/actor/lib/UnionDisassembler.java X [run] ptolemy/actor/lib/VariableClock.java X [run] ptolemy/actor/lib/VariableSleep.java X [run] ptolemy/actor/lib/WallClockTime.java [run] ptolemy/actor/lib/Writer.java X [run] ptolemy/actor/lib/colt/ColtBeta.java X [run] ptolemy/actor/lib/colt/ColtBinomial.java X [run] ptolemy/actor/lib/colt/ColtBinomialSelector.java X [run] ptolemy/actor/lib/colt/ColtBreitWigner.java X [run] ptolemy/actor/lib/colt/ColtChiSquare.java X [run] ptolemy/actor/lib/colt/ColtExponential.java X [run] ptolemy/actor/lib/colt/ColtExponentialPower.java X [run] ptolemy/actor/lib/colt/ColtGamma.java X [run] ptolemy/actor/lib/colt/ColtHyperGeometric.java X [run] ptolemy/actor/lib/colt/ColtLogarithmic.java X [run] ptolemy/actor/lib/colt/ColtNegativeBinomial.java X [run] ptolemy/actor/lib/colt/ColtNormal.java X [run] ptolemy/actor/lib/colt/ColtPoisson.java X [run] ptolemy/actor/lib/colt/ColtPoissonSlow.java X [run] ptolemy/actor/lib/colt/ColtStudentT.java X [run] ptolemy/actor/lib/colt/ColtVonMises.java X [run] ptolemy/actor/lib/colt/ColtZeta.java X [run] ptolemy/actor/lib/comm/ConvolutionalCoder.java X [run] ptolemy/actor/lib/comm/DeScrambler.java X [run] ptolemy/actor/lib/comm/HadamardCode.java X [run] ptolemy/actor/lib/comm/HammingCoder.java X [run] ptolemy/actor/lib/comm/HammingDecoder.java X [run] ptolemy/actor/lib/comm/HuffmanBasic.java X [run] ptolemy/actor/lib/comm/HuffmanCoder.java X [run] ptolemy/actor/lib/comm/HuffmanDecoder.java X [run] ptolemy/actor/lib/comm/LempelZivCoder.java X [run] ptolemy/actor/lib/comm/LempelZivDecoder.java X [run] ptolemy/actor/lib/comm/Scrambler.java X [run] ptolemy/actor/lib/comm/Slicer.java X [run] ptolemy/actor/lib/comm/TrellisDecoder.java X [run] ptolemy/actor/lib/comm/ViterbiDecoder.java X [run] ptolemy/actor/lib/conversions/AnythingToDouble.java X [run] ptolemy/actor/lib/conversions/Converter.java X [run] ptolemy/actor/lib/conversions/DoubleToFix.java X [run] ptolemy/actor/lib/conversions/FixToDouble.java X [run] ptolemy/actor/lib/conversions/FixToFix.java X [run] ptolemy/actor/lib/conversions/IntArrayToString.java X [run] ptolemy/actor/lib/conversions/StringToIntArray.java X [run] ptolemy/actor/lib/conversions/StringToUnsignedByteArray.java X [run] ptolemy/actor/lib/conversions/UnsignedByteArrayToString.java X [run] ptolemy/actor/lib/conversions/json/JSONToToken.java X [run] ptolemy/actor/lib/conversions/json/TokenToJSON.java [run] ptolemy/actor/lib/database/ArrayOfRecordsExporter.java [run] ptolemy/actor/lib/database/ArrayOfRecordsRecorder.java [run] ptolemy/actor/lib/database/DatabaseInsert.java [run] ptolemy/actor/lib/database/DatabaseManager.java [run] ptolemy/actor/lib/database/DatabaseQuery.java [run] ptolemy/actor/lib/database/DatabaseSelect.java [run] ptolemy/actor/lib/database/SQLStatement.java [run] ptolemy/actor/lib/embeddedJava/CompiledCompositeActor.java [run] ptolemy/actor/lib/embeddedJava/EmbeddedJavaActor.java [run] ptolemy/actor/lib/gui/ArrayPlotterXY.java [run] ptolemy/actor/lib/gui/ArrowKeyProbe.java [run] ptolemy/actor/lib/gui/ArrowKeySensor.java [run] ptolemy/actor/lib/gui/ConstPlaceable.java [run] ptolemy/actor/lib/gui/Plotter.java [run] ptolemy/actor/lib/gui/PlotterBase.java X [run] ptolemy/actor/lib/gui/RealTimePlotter.java [run] ptolemy/actor/lib/gui/SketchedSource.java [run] ptolemy/actor/lib/gui/SliderSource.java X [run] ptolemy/actor/lib/hoc/ApplyFilterOverArray.java X [run] ptolemy/actor/lib/hoc/ApplyFunction.java X [run] ptolemy/actor/lib/hoc/ApplyFunctionOverSequence.java [run] ptolemy/actor/lib/hoc/CaseDirector.java [run] ptolemy/actor/lib/hoc/LifeCycleManager.java [run] ptolemy/actor/lib/hoc/MirrorComposite.java [run] ptolemy/actor/lib/hoc/MobileFunction.java [run] ptolemy/actor/lib/hoc/MobileModel.java [run] ptolemy/actor/lib/hoc/MultiCompositeActor.java [run] ptolemy/actor/lib/hoc/RealTimeComposite.java [run] ptolemy/actor/lib/hoc/Refinement.java X [run] ptolemy/actor/lib/hoc/ThreadedComposite.java [run] ptolemy/actor/lib/io/CSVReader.java X [run] ptolemy/actor/lib/io/ExpressionWriter.java X [run] ptolemy/actor/lib/io/TokenReader.java [run] ptolemy/actor/lib/jni/CodegenActor.java [run] ptolemy/actor/lib/jni/CompiledCompositeActor.java [run] ptolemy/actor/lib/jni/EmbeddedCActor.java [run] ptolemy/actor/lib/jni/EmbeddedCFileActor.java [run] ptolemy/actor/lib/jopio/JopReadPort.java [run] ptolemy/actor/lib/jopio/JopSerialRead.java [run] ptolemy/actor/lib/jopio/JopSerialWrite.java [run] ptolemy/actor/lib/jopio/JopWatchDog.java [run] ptolemy/actor/lib/jopio/JopWritePort.java X [run] ptolemy/actor/lib/logic/LogicalNot.java X [run] ptolemy/actor/lib/logic/TrueGate.java [run] ptolemy/actor/lib/net/DatagramReader.java [run] ptolemy/actor/lib/net/DatagramWriter.java [run] ptolemy/actor/lib/net/demo/Datagram/Datagram.java [run] ptolemy/actor/lib/qm/BasicSwitch.java [run] ptolemy/actor/lib/qm/Bus.java [run] ptolemy/actor/lib/qm/CompositeQuantityManager.java [run] ptolemy/actor/lib/qm/CrossbarSwitch.java [run] ptolemy/actor/lib/qm/QuantityManagerMonitor.java [run] ptolemy/actor/lib/qm/Scheduler.java [run] ptolemy/actor/lib/qm/TTESwitch.java [run] ptolemy/actor/lib/security/KeyReader.java [run] ptolemy/actor/lib/security/KeyStoreActor.java [run] ptolemy/actor/lib/security/KeyWriter.java [run] ptolemy/actor/lib/security/PrivateKeyReader.java [run] ptolemy/actor/lib/security/PublicKeyReader.java [run] ptolemy/actor/lib/security/SecretKey.java [run] ptolemy/actor/lib/security/SecretKeyReader.java [run] ptolemy/actor/lib/security/SignatureActor.java [run] ptolemy/actor/lib/security/SignatureSigner.java [run] ptolemy/actor/lib/security/SignatureVerifier.java [run] ptolemy/actor/lib/security/SymmetricDecryption.java [run] ptolemy/actor/lib/security/SymmetricEncryption.java X [run] ptolemy/actor/lib/string/StringSimpleReplace.java X [run] ptolemy/actor/lib/string/StringSplit.java [run] ptolemy/actor/lib/test/LoopTest2.java [run] ptolemy/actor/lib/test/RampNecessaryFiles.java [run] ptolemy/actor/lib/test/RecorderGeneral.java [run] ptolemy/actor/lib/test/SearchTest.java [run] ptolemy/actor/lib/test/SleepFireTwice.java [run] ptolemy/actor/lib/test/TestOrderedMerge.java [run] ptolemy/actor/lib/tutorial/SimpleALU.java [run] ptolemy/actor/lib/tutorial/StaticALU.java [run] ptolemy/actor/lib/vhdl/AddSubtract.java [run] ptolemy/actor/lib/vhdl/Concat.java [run] ptolemy/actor/lib/vhdl/FixComparator.java [run] ptolemy/actor/lib/vhdl/FixConst.java [run] ptolemy/actor/lib/vhdl/FixCounter.java [run] ptolemy/actor/lib/vhdl/FixSequence.java [run] ptolemy/actor/lib/vhdl/FixToString.java [run] ptolemy/actor/lib/vhdl/FixTransformer.java [run] ptolemy/actor/lib/vhdl/IntegerCounter.java [run] ptolemy/actor/lib/vhdl/LogicFunction.java [run] ptolemy/actor/lib/vhdl/LogicalNot.java [run] ptolemy/actor/lib/vhdl/Memory.java [run] ptolemy/actor/lib/vhdl/Multiplexor.java [run] ptolemy/actor/lib/vhdl/Multiplier.java [run] ptolemy/actor/lib/vhdl/ROM.java [run] ptolemy/actor/lib/vhdl/Register.java [run] ptolemy/actor/lib/vhdl/RegisterSR.java [run] ptolemy/actor/lib/vhdl/Slice.java [run] ptolemy/actor/lib/video/DCT2x2dc.java [run] ptolemy/actor/lib/video/DCT4x4dc.java [run] ptolemy/actor/lib/video/DCT8x8.java [run] ptolemy/actor/lib/video/IDCT4x4dc.java [run] ptolemy/actor/lib/video/IDCT8x8.java [run] ptolemy/actor/lib/video/SumofAbsoluteDifferences.java X [run] ptolemy/actor/lib/xslt/XMLInclusion.java X [run] ptolemy/actor/lib/xslt/XSLTransformer.java [run] ptolemy/actor/parameters/DoubleRangeParameter.java [run] ptolemy/actor/parameters/FilePortParameter.java [run] ptolemy/actor/parameters/LocationParameter.java [run] ptolemy/actor/parameters/Priority.java [run] ptolemy/actor/parameters/SharedParameter.java [run] ptolemy/actor/parameters/test/TestSharedParameter.java [run] ptolemy/actor/process/CompositeProcessDirector.java [run] ptolemy/actor/process/ProcessDirector.java [run] ptolemy/actor/process/test/ProcessSink.java [run] ptolemy/actor/process/test/TestProcessActor.java [run] ptolemy/actor/process/test/TypedTestProcessActor.java [run] ptolemy/actor/sched/FixedPointDirector.java [run] ptolemy/actor/sched/StaticSchedulingDirector.java [run] ptolemy/actor/test/IdentityActor.java [run] ptolemy/actor/test/TestActor.java [run] ptolemy/actor/test/TypedTestActor.java [run] ptolemy/caltrop/actors/CalInterpreter.java [run] ptolemy/component/ComponentActor.java [run] ptolemy/data/expr/ChoiceParameter.java [run] ptolemy/data/expr/ExpertParameter.java [run] ptolemy/data/expr/NameParameter.java [run] ptolemy/data/expr/SingletonParameter.java [run] ptolemy/data/expr/StringConstantParameter.java [run] ptolemy/data/ontologies/lattice/unit/SIPrefixUnitConversionInfo.java [run] ptolemy/data/ontologies/lattice/unit/UnitConversionInfo.java [run] ptolemy/data/unit/BaseUnit.java [run] ptolemy/domains/ca/kernel/CADirector.java [run] ptolemy/domains/ca/lib/CA2DConvolution.java [run] ptolemy/domains/ca/lib/gui/CAViewer.java [run] ptolemy/domains/ci/demo/Router/QueueControl.java [run] ptolemy/domains/ci/kernel/CIActor.java [run] ptolemy/domains/ci/kernel/CIDirector.java [run] ptolemy/domains/ci/lib/BackDropQueue.java [run] ptolemy/domains/ci/lib/BinarySwitch.java [run] ptolemy/domains/ci/lib/FrontDropQueue.java [run] ptolemy/domains/ci/lib/Queue.java [run] ptolemy/domains/continuous/demo/SigmaDelta/SigmaDelta.java [run] ptolemy/domains/continuous/demo/Thermostat/Thermostat.java [run] ptolemy/domains/continuous/kernel/ContinuousIntegrator.java [run] ptolemy/domains/continuous/kernel/HybridModalDirector.java [run] ptolemy/domains/continuous/kernel/Noise.java [run] ptolemy/domains/continuous/lib/Derivative.java [run] ptolemy/domains/continuous/lib/Waveform.java [run] ptolemy/domains/coroutine/kernel/AccumLUB.java [run] ptolemy/domains/coroutine/kernel/CoroutineDirector.java [run] ptolemy/domains/coroutine/lib/Conditional.java [run] ptolemy/domains/coroutine/lib/Counter.java [run] ptolemy/domains/coroutine/lib/Emit.java [run] ptolemy/domains/coroutine/lib/Pause.java [run] ptolemy/domains/csp/demo/BusContention/ContentionAlarm.java [run] ptolemy/domains/csp/demo/BusContention/Controller.java [run] ptolemy/domains/csp/demo/BusContention/Memory.java [run] ptolemy/domains/csp/demo/BusContention/Processor.java [run] ptolemy/domains/csp/demo/DiningPhilosophers/Chopstick.java [run] ptolemy/domains/csp/demo/DiningPhilosophers/Philosopher.java [run] ptolemy/domains/csp/kernel/CSPActor.java [run] ptolemy/domains/csp/kernel/CSPDirector.java [run] ptolemy/domains/csp/kernel/test/CSPCondGet.java [run] ptolemy/domains/csp/kernel/test/CSPCondPut.java [run] ptolemy/domains/csp/kernel/test/CSPGet.java [run] ptolemy/domains/csp/kernel/test/CSPGetToken.java [run] ptolemy/domains/csp/kernel/test/CSPHasRoom.java [run] ptolemy/domains/csp/kernel/test/CSPHasToken.java [run] ptolemy/domains/csp/kernel/test/CSPPut.java [run] ptolemy/domains/csp/kernel/test/CSPPutToken.java [run] ptolemy/domains/csp/lib/Barrier.java [run] ptolemy/domains/csp/lib/Buffer.java [run] ptolemy/domains/csp/lib/CSPBuffer.java [run] ptolemy/domains/csp/lib/CSPMultiSink.java [run] ptolemy/domains/csp/lib/CSPMultiSource.java [run] ptolemy/domains/csp/lib/CSPSieve.java [run] ptolemy/domains/csp/lib/CSPSink.java [run] ptolemy/domains/csp/lib/CSPSource.java [run] ptolemy/domains/csp/lib/ResourcePool.java [run] ptolemy/domains/ct/demo/Corba/NonlinearClient.java [run] ptolemy/domains/ct/demo/Helicopter/AccelerLinearizer.java [run] ptolemy/domains/ct/demo/Helicopter/ClimbLinearizer.java [run] ptolemy/domains/ct/demo/Helicopter/ControllerActor.java [run] ptolemy/domains/ct/demo/Helicopter/CruiseLinearizer.java [run] ptolemy/domains/ct/demo/Helicopter/Helicopter.java [run] ptolemy/domains/ct/demo/Helicopter/HelicopterActor.java [run] ptolemy/domains/ct/demo/Helicopter/HoverLinearizer.java [run] ptolemy/domains/ct/demo/Helicopter/XZHigherDerivatives.java [run] ptolemy/domains/ct/demo/Lorenz/Lorenz.java [run] ptolemy/domains/ct/demo/SigmaDelta/SigmaDelta.java [run] ptolemy/domains/ct/demo/Thermostat/Thermostat.java [run] ptolemy/domains/ct/kernel/CTBaseIntegrator.java [run] ptolemy/domains/ct/kernel/CTCase.java [run] ptolemy/domains/ct/kernel/CTCaseDirector.java [run] ptolemy/domains/ct/kernel/CTCompositeActor.java [run] ptolemy/domains/ct/kernel/CTEmbeddedDirector.java [run] ptolemy/domains/ct/kernel/CTMultiSolverDirector.java [run] ptolemy/domains/ct/kernel/CTRefinement.java [run] ptolemy/domains/ct/kernel/HSFSMDirector.java [run] ptolemy/domains/ct/kernel/HSModalDirector.java [run] ptolemy/domains/ct/kernel/test/CTDummyDynamicActor.java [run] ptolemy/domains/ct/kernel/test/CTDummyEventGenerator.java [run] ptolemy/domains/ct/kernel/test/CTDummyMISOActor.java [run] ptolemy/domains/ct/kernel/test/CTDummySISOActor.java [run] ptolemy/domains/ct/kernel/test/CTDummySSControlActor.java [run] ptolemy/domains/ct/kernel/test/CTDummySink.java [run] ptolemy/domains/ct/kernel/test/CTDummySource.java [run] ptolemy/domains/ct/kernel/test/CTDummyStatefulActor.java [run] ptolemy/domains/ct/kernel/test/CTDummyWaveformGenerator.java [run] ptolemy/domains/ct/kernel/test/CTTestIntegrator.java [run] ptolemy/domains/ct/lib/CTPeriodicSampler.java [run] ptolemy/domains/ct/lib/CTRateLimiter.java [run] ptolemy/domains/ct/lib/CTTriggeredSampler.java [run] ptolemy/domains/ct/lib/ContinuousClock.java [run] ptolemy/domains/ct/lib/ContinuousTransferFunction.java [run] ptolemy/domains/ct/lib/DifferentialSystem.java [run] ptolemy/domains/ct/lib/DiscreteClock.java [run] ptolemy/domains/ct/lib/EventSource.java [run] ptolemy/domains/ct/lib/FirstOrderHold.java [run] ptolemy/domains/ct/lib/LevelCrossingDetector.java [run] ptolemy/domains/ct/lib/LinearStateSpace.java [run] ptolemy/domains/ct/lib/ThresholdMonitor.java [run] ptolemy/domains/ct/lib/TriggeredContinuousClock.java [run] ptolemy/domains/ct/lib/ZeroCrossingDetector.java [run] ptolemy/domains/ct/lib/ZeroOrderHold.java [run] ptolemy/domains/ct/test/CTTestValueSink.java [run] ptolemy/domains/curriculum/Course.java [run] ptolemy/domains/curriculum/Or.java [run] ptolemy/domains/dde/demo/HelloWorld/Consonants.java [run] ptolemy/domains/dde/demo/HelloWorld/PrintString.java [run] ptolemy/domains/dde/demo/HelloWorld/Punctuation.java [run] ptolemy/domains/dde/demo/HelloWorld/Vowels.java [run] ptolemy/domains/dde/demo/LocalZeno/ListenClock.java [run] ptolemy/domains/dde/demo/LocalZeno/ListenFeedBackDelay.java [run] ptolemy/domains/dde/demo/LocalZeno/ListenFork.java [run] ptolemy/domains/dde/demo/LocalZeno/ListenSink.java [run] ptolemy/domains/dde/demo/LocalZeno/ListenWire.java [run] ptolemy/domains/dde/demo/LocalZeno/ZenoDelay.java [run] ptolemy/domains/dde/kernel/DDEActor.java [run] ptolemy/domains/dde/kernel/DDEDirector.java [run] ptolemy/domains/dde/kernel/FeedBackDelay.java [run] ptolemy/domains/dde/kernel/test/DDEGet.java [run] ptolemy/domains/dde/kernel/test/DDEGetNToken.java [run] ptolemy/domains/dde/kernel/test/DDEGetToken.java [run] ptolemy/domains/dde/kernel/test/DDEPut.java [run] ptolemy/domains/dde/kernel/test/DDEPutToken.java [run] ptolemy/domains/dde/kernel/test/FlowThrough.java [run] ptolemy/domains/dde/kernel/test/TwoPut.java [run] ptolemy/domains/dde/lib/DDESink.java [run] ptolemy/domains/dde/lib/DoubleFork.java [run] ptolemy/domains/dde/lib/Wire.java [run] ptolemy/domains/ddf/lib/ActorRecursion.java [run] ptolemy/domains/ddf/lib/DDFOrderedMerge.java [run] ptolemy/domains/ddf/lib/DDFSelect.java [run] ptolemy/domains/ddf/lib/DDFSingleTokenCommutator.java [run] ptolemy/domains/de/demo/SmartSender/SmartSender.java [run] ptolemy/domains/de/lib/AverageOverTime.java [run] ptolemy/domains/de/lib/Derivative.java [run] ptolemy/domains/de/lib/EventButton.java [run] ptolemy/domains/de/lib/EventFilter.java [run] ptolemy/domains/de/lib/GetCurrentMicrostep.java [run] ptolemy/domains/de/lib/Inhibit.java [run] ptolemy/domains/de/lib/Integrator.java [run] ptolemy/domains/de/lib/Merge.java [run] ptolemy/domains/de/lib/MostRecent.java [run] ptolemy/domains/de/lib/NonInterruptibleTimer.java [run] ptolemy/domains/de/lib/PID.java [run] ptolemy/domains/de/lib/Previous.java [run] ptolemy/domains/de/lib/Queue.java [run] ptolemy/domains/de/lib/Register.java [run] ptolemy/domains/de/lib/Server.java [run] ptolemy/domains/de/lib/SharedQueue.java [run] ptolemy/domains/de/lib/SuppressSimultaneousEvents.java [run] ptolemy/domains/de/lib/TestActorPortDepth.java [run] ptolemy/domains/de/lib/TimeCompare.java [run] ptolemy/domains/de/lib/TimeGap.java [run] ptolemy/domains/de/lib/TimedDelay.java [run] ptolemy/domains/de/lib/Timer.java [run] ptolemy/domains/de/lib/UnionMerge.java [run] ptolemy/domains/de/lib/VariableDelay.java [run] ptolemy/domains/de/lib/WaitingTime.java [run] ptolemy/domains/de/lib/Wire.java [run] ptolemy/domains/de/lib/test/SimpleDelay.java [run] ptolemy/domains/de/lib/test/TestSource.java [run] ptolemy/domains/dt/kernel/DTDirector.java [run] ptolemy/domains/dt/kernel/test/FakePlotter.java [run] ptolemy/domains/dt/kernel/test/OnePort.java [run] ptolemy/domains/dt/kernel/test/TimedDisplay.java [run] ptolemy/domains/dt/kernel/test/TwoPort.java [run] ptolemy/domains/fsm/demo/ABP/DEMessageSource.java [run] ptolemy/domains/fsm/demo/ABP/DETimer.java [run] ptolemy/domains/fsm/kernel/Configurer.java [run] ptolemy/domains/fsm/kernel/FSMActor.java [run] ptolemy/domains/fsm/kernel/FSMDirector.java [run] ptolemy/domains/fsm/kernel/ModalDirector.java [run] ptolemy/domains/fsm/kernel/MultirateFSMDirector.java [run] ptolemy/domains/fsm/kernel/NonStrictFSMDirector.java [run] ptolemy/domains/fsm/kernel/fmv/FmvAutomaton.java [run] ptolemy/domains/fsm/kernel/ia/InterfaceAutomaton.java [run] ptolemy/domains/fsm/kernel/test/ZeroOneSource.java [run] ptolemy/domains/fsm/modal/Case.java [run] ptolemy/domains/fsm/modal/ModalController.java [run] ptolemy/domains/fsm/modal/ModalModel.java [run] ptolemy/domains/fsm/modal/Refinement.java [run] ptolemy/domains/fsm/modal/TransitionRefinement.java [run] ptolemy/domains/hdf/kernel/HDFDirector.java [run] ptolemy/domains/hdf/kernel/HDFFSMDirector.java [run] ptolemy/domains/modal/kernel/Configurer.java [run] ptolemy/domains/modal/kernel/FSMActor.java [run] ptolemy/domains/modal/kernel/FSMDirector.java [run] ptolemy/domains/modal/kernel/ModalDirector.java [run] ptolemy/domains/modal/kernel/MultirateFSMDirector.java [run] ptolemy/domains/modal/kernel/NonStrictFSMDirector.java [run] ptolemy/domains/modal/kernel/fmv/FmvAutomaton.java [run] ptolemy/domains/modal/kernel/ia/InterfaceAutomaton.java [run] ptolemy/domains/modal/kernel/test/ZeroOneSource.java [run] ptolemy/domains/modal/modal/Case.java [run] ptolemy/domains/modal/modal/ModalController.java [run] ptolemy/domains/modal/modal/ModalModel.java [run] ptolemy/domains/modal/modal/ModalRefinement.java [run] ptolemy/domains/modal/modal/Refinement.java [run] ptolemy/domains/modal/modal/TransitionRefinement.java [run] ptolemy/domains/ontologies/lib/UnitsConverter.java [run] ptolemy/domains/petrinet/kernel/PetriNetActor.java [run] ptolemy/domains/petrinet/kernel/PetriNetDirector.java [run] ptolemy/domains/petrinet/kernel/Place.java [run] ptolemy/domains/petrinet/kernel/Transition.java [run] ptolemy/domains/petrinet/lib/PetriNetRecorder.java [run] ptolemy/domains/petrinet/lib/gui/PetriNetDisplay.java [run] ptolemy/domains/pn/demo/QR/ND_1.java [run] ptolemy/domains/pn/demo/QR/ND_2.java [run] ptolemy/domains/pn/demo/QR/ND_3.java [run] ptolemy/domains/pn/demo/QR/ND_4.java [run] ptolemy/domains/pn/demo/QR/ND_5.java [run] ptolemy/domains/pn/demo/QR/StreamToMatrix.java [run] ptolemy/domains/pn/kernel/TimedPNDirector.java [run] ptolemy/domains/pn/kernel/test/TestDirector.java [run] ptolemy/domains/pn/kernel/test/TestSink.java [run] ptolemy/domains/pn/lib/Starver.java [run] ptolemy/domains/psdf/kernel/PSDFDirector.java [run] ptolemy/domains/ptera/kernel/ParametersAttribute.java [run] ptolemy/domains/ptera/kernel/PteraController.java [run] ptolemy/domains/ptera/kernel/PteraDirector.java [run] ptolemy/domains/ptera/kernel/PteraModalModel.java [run] ptolemy/domains/ptera/lib/DebuggerParameter.java [run] ptolemy/domains/ptera/lib/SynchronizeToRealtime.java [run] ptolemy/domains/ptera/lib/TableauParameter.java [run] ptolemy/domains/pthales/kernel/PthalesDirector.java [run] ptolemy/domains/pthales/lib/PthalesAddHeaderActor.java [run] ptolemy/domains/pthales/lib/PthalesAtomicActor.java [run] ptolemy/domains/pthales/lib/PthalesCompositeActor.java [run] ptolemy/domains/pthales/lib/PthalesDynamicCompositeActor.java [run] ptolemy/domains/pthales/lib/PthalesGenericActor.java [run] ptolemy/domains/pthales/lib/PthalesRemoveHeaderActor.java [run] ptolemy/domains/pthales/lib/PthalesWrapperCompositeActor.java [run] ptolemy/domains/rendezvous/kernel/RendezvousDirector.java [run] ptolemy/domains/rendezvous/kernel/test/TestSink.java [run] ptolemy/domains/rendezvous/lib/Barrier.java [run] ptolemy/domains/rendezvous/lib/Buffer.java [run] ptolemy/domains/rendezvous/lib/Merge.java [run] ptolemy/domains/rendezvous/lib/ResourcePool.java [run] ptolemy/domains/sdf/demo/Butterfly/Butterfly.java [run] ptolemy/domains/sdf/demo/OrthogonalCom/OrthogonalCom.java [run] ptolemy/domains/sdf/kernel/test/SDFTestConsumer.java [run] ptolemy/domains/sdf/kernel/test/SDFTestDelay.java [run] ptolemy/domains/sdf/kernel/test/SDFTestJoin.java [run] ptolemy/domains/sdf/kernel/test/SDFTestRamp.java [run] ptolemy/domains/sdf/kernel/test/SDFTestSplit.java [run] ptolemy/domains/sdf/kernel/test/SDFTestZeroRate1.java [run] ptolemy/domains/sdf/kernel/test/SDFTestZeroRate2.java All of these: [run] ptolemy/domains/sdf/lib/Autocorrelation.java [run] ptolemy/domains/sdf/lib/BitsToInt.java [run] ptolemy/domains/sdf/lib/BootstrapSampleDelay.java [run] ptolemy/domains/sdf/lib/Chop.java [run] ptolemy/domains/sdf/lib/CountTrues.java [run] ptolemy/domains/sdf/lib/DelayLine.java [run] ptolemy/domains/sdf/lib/DoubleToMatrix.java [run] ptolemy/domains/sdf/lib/DownSample.java [run] ptolemy/domains/sdf/lib/FFT.java [run] ptolemy/domains/sdf/lib/FIR.java [run] ptolemy/domains/sdf/lib/IFFT.java [run] ptolemy/domains/sdf/lib/IntToBits.java [run] ptolemy/domains/sdf/lib/LMSAdaptive.java [run] ptolemy/domains/sdf/lib/LineCoder.java [run] ptolemy/domains/sdf/lib/MatrixJoin.java [run] ptolemy/domains/sdf/lib/MatrixSplit.java [run] ptolemy/domains/sdf/lib/MatrixToDouble.java [run] ptolemy/domains/sdf/lib/MatrixToSequence.java [run] ptolemy/domains/sdf/lib/RaisedCosine.java [run] ptolemy/domains/sdf/lib/SDFConverter.java [run] ptolemy/domains/sdf/lib/SDFTransformer.java [run] ptolemy/domains/sdf/lib/SequenceToMatrix.java [run] ptolemy/domains/sdf/lib/UpSample.java [run] ptolemy/domains/sdf/lib/VariableFIR.java [run] ptolemy/domains/sdf/lib/VariableLattice.java [run] ptolemy/domains/sdf/lib/VariableRecursiveLattice.java until here. [run] ptolemy/domains/sdf/lib/vq/HTVQEncode.java [run] ptolemy/domains/sdf/lib/vq/ImageDisplay.java [run] ptolemy/domains/sdf/lib/vq/ImagePartition.java [run] ptolemy/domains/sdf/lib/vq/ImageSequence.java [run] ptolemy/domains/sdf/lib/vq/ImageUnpartition.java [run] ptolemy/domains/sdf/lib/vq/PSNR.java [run] ptolemy/domains/sdf/lib/vq/VQDecode.java [run] ptolemy/domains/sdf/optimize/OptimizingSDFDirector.java [run] ptolemy/domains/sdf/optimize/lib/DummyDisplay.java [run] ptolemy/domains/sdf/optimize/lib/DummySource.java [run] ptolemy/domains/sdf/optimize/lib/DummyTransformer.java [run] ptolemy/domains/sequence/gui/VisualSequenceDirector.java [run] ptolemy/domains/sequence/kernel/ControlActor.java [run] ptolemy/domains/sequence/kernel/ProcessAttribute.java [run] ptolemy/domains/sequence/kernel/ProcessDirector.java [run] ptolemy/domains/sequence/kernel/SequenceAttribute.java [run] ptolemy/domains/sequence/kernel/SequenceDirector.java [run] ptolemy/domains/sequence/lib/Break.java [run] ptolemy/domains/sequence/lib/IfThen.java [run] ptolemy/domains/sequence/lib/IfThenElse.java [run] ptolemy/domains/sequence/lib/SequencedIntegrator.java [run] ptolemy/domains/sequence/lib/SequencedVariable.java [run] ptolemy/domains/sequence/lib/While.java [run] ptolemy/domains/space/Occupants.java [run] ptolemy/domains/space/Region.java [run] ptolemy/domains/space/Room.java [run] ptolemy/domains/sr/kernel/SRDirector.java [run] ptolemy/domains/sr/lib/Absent.java [run] ptolemy/domains/sr/lib/Combine.java [run] ptolemy/domains/sr/lib/Current.java [run] ptolemy/domains/sr/lib/Default.java [run] ptolemy/domains/sr/lib/EnabledComposite.java [run] ptolemy/domains/sr/lib/InstantaneousDialogGenerator.java [run] ptolemy/domains/sr/lib/NonStrictDelay.java [run] ptolemy/domains/sr/lib/NonStrictLogicFunction.java [run] ptolemy/domains/sr/lib/NonStrictThreeBitAdder.java [run] ptolemy/domains/sr/lib/Pre.java [run] ptolemy/domains/sr/lib/SingleTokenDistributor.java [run] ptolemy/domains/sr/lib/Undefined.java [run] ptolemy/domains/sr/lib/When.java [run] ptolemy/domains/sr/lib/gui/ButtonTime.java [run] ptolemy/domains/sr/lib/gui/NonStrictDisplay.java [run] ptolemy/domains/taskpt/kernel/TaskDirector.java [run] ptolemy/domains/taskpt/kernel/ThreadDirector.java [run] ptolemy/domains/taskpt/lib/AddSubtractAll.java [run] ptolemy/domains/taskpt/lib/Alloc.java [run] ptolemy/domains/taskpt/lib/ChangePtr.java [run] ptolemy/domains/taskpt/lib/Load.java [run] ptolemy/domains/taskpt/lib/Store.java [run] ptolemy/domains/taskpt/lib/Task.java [run] ptolemy/domains/taskpt/lib/gui/DisplayAll.java [run] ptolemy/domains/tdl/kernel/TDLActor.java [run] ptolemy/domains/tdl/kernel/TDLController.java [run] ptolemy/domains/tdl/kernel/TDLModule.java [run] ptolemy/domains/tdl/kernel/TDLModuleDirector.java [run] ptolemy/domains/tdl/kernel/TDLRefinement.java [run] ptolemy/domains/tdl/kernel/TDLTask.java [run] ptolemy/domains/tester/kernel/TesterDirector.java [run] ptolemy/domains/tm/kernel/TMDirector.java [run] ptolemy/domains/tm/lib/TMCompositeFacade.java [run] ptolemy/moml/filter/test/TestRamp.java [run] ptolemy/vergil/actor/lib/LEDMatrix.java [run] ptolemy/vergil/actor/lib/ModelDisplay.java X [run] ptolemy/vergil/basic/export/web/AreaEventType.java X [run] ptolemy/vergil/basic/export/web/DefaultIconLink.java X [run] ptolemy/vergil/basic/export/web/DefaultIconScript.java X [run] ptolemy/vergil/basic/export/web/DefaultTitle.java X [run] ptolemy/vergil/basic/export/web/DygraphsJSPlotter.java X [run] ptolemy/vergil/basic/export/web/HTMLImage.java X [run] ptolemy/vergil/basic/export/web/HTMLText.java X [run] ptolemy/vergil/basic/export/web/HTMLTextPosition.java X [run] ptolemy/vergil/basic/export/web/IconLink.java X [run] ptolemy/vergil/basic/export/web/IconScript.java X [run] ptolemy/vergil/basic/export/web/LinkTarget.java X [run] ptolemy/vergil/basic/export/web/LinkToOpenTableaux.java X [run] ptolemy/vergil/basic/export/web/ParameterDisplayIconScript.java X [run] ptolemy/vergil/basic/export/web/Title.java [run] ptolemy/verification/lib/BoundedBufferNondeterministicDelay.java [run] ptolemy/verification/lib/BoundedBufferTimedDelay.java [run] ptolemy/verification/lib/SMVLegacyCodeActor.java These were missing because the are attributes: ptolemy/vergil/actor/lib/MonitorReceiverContents.java ptolemy/vergil/actor/lib/ShowTypes.java ptolemy/vergil/actor/lib/MonitorReceiverAttribute.java