https://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362009-04-29T23:04:58ZEcoinformatics RedmineKepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136382009-04-29T23:04:58Zben leinfelderleinfelder@nceas.ucsb.edu
<ul></ul><p>reverting to an older org.ecoinformatics.ecogrid.RegistryService-stub.jar version did not work (still had the same error)</p> Kepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136392009-04-30T01:00:28Zben leinfelderleinfelder@nceas.ucsb.edu
<ul></ul><p>removing the call to the EcogridService does not fix the invalid memory error. This doesn't have to do with that service/jar - it's a much "larger" issue.<br />We've got a few layers here: java calling ant that calls java...<br />any ideas on where to begin?</p> Kepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136402009-04-30T01:08:08Zben leinfelderleinfelder@nceas.ucsb.edu
<ul></ul><p>This same error occurs when we use the "run-workflow" ant target:<br />$> ant run-workflow -Dworkflow=../common/demos/getting-started/04-HelloWorld.xml</p>
<p>run-workflow:<br /> [run] args: -runwf /Users/leinfelder/workspace_kepler/kepler/build-area/../common/demos/getting-started/04-HelloWorld.xml<br /> [run] 286 ms. Memory: 9780K Free: 3942K (40%)<br /> [run] WARN (org.ecoinformatics.seek.ecogrid.SearchRegistryAction:queryRegistryRewriteConfig:201) Problem looking up registry entries using endpoint: <br /> [run] <a class="external" href="http://knb.ecoinformatics.org/registry/services/RegistryService">http://knb.ecoinformatics.org/registry/services/RegistryService</a><br /> [run] Invalid memory access of location 00000000 eip=91af94a8</p> Kepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136412009-04-30T01:24:04Zben leinfelderleinfelder@nceas.ucsb.edu
<ul></ul><p>re-assigning to David - maybe he can shed some light on what might be happening.<br />(Unfortunately it seems like it might be isolated to Macs?)</p> Kepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136422009-06-12T20:40:57ZDavid Welkerwelker4kepler@gmail.com
<ul></ul><p>Does kepler.sh even exist anymore? I am not finding it in any of the modules I have downloaded. I cannot reproduce this problem using the 'ant run-workflow' command anymore, although I did used to get this error intermittently. Unless someone confirms that this error is still occurring for them, I am going to close this bug shortly.</p> Kepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136432009-06-12T20:50:54ZChad Berkleyberkley@nceas.ucsb.edu
<ul></ul><p>Run the 'ant starupt-script' command to build the kepler.sh file. Not sure if this is still a bug with the new script or not.</p> Kepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136442009-06-12T21:14:13ZDavid Welkerwelker4kepler@gmail.com
<ul></ul><p>This bug is no longer occurring on the Mac with either kepler.sh or with 'ant run-workflow.' However, kepler.sh does throw an exception when you choose to exit using ctrl-c, and that is not aesthetically pleasing. However, this bug no longer exists. I am closing it.</p> Kepler - Bug #4034: "Invalid memory access" when running workflow from the command linehttps://projects.ecoinformatics.org/ecoinfo/issues/4034?journal_id=136452013-03-27T21:25:23ZRedmine Admin
<ul></ul><p>Original Bugzilla ID was 4034</p>