FIRST: Issueshttps://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362010-06-03T14:44:34ZEcoinformatics Redmine
Redmine Bug #5038 (Resolved): Assessment items not displayed on the websitehttps://projects.ecoinformatics.org/ecoinfo/issues/50382010-06-03T14:44:34ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>Assessments uploaded to the Bespin server via Morpho are visible under Morpho<br />interface as a saved data package. But, the same assessment is shown to have <br />ZERO items when viewed on the FIRST website!</p>
<p>e.g., 2007F_BS111_Exam1 (moyerbrailean.452.18) and Jay_BS111_2007Fall_Exam1 (jlee.4079.4)</p>
<p>This happens especially when an assessment is re-opened for edits and saved<br />on to the server.</p> Bug #4901 (Resolved): Web interface does not display assessments!https://projects.ecoinformatics.org/ecoinfo/issues/49012010-03-24T14:44:15ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>The "Browse All Assessments" option on the FIRST website hosted by the<br />EGR server is corrupt/flawed currently. Instead of displaying a list of<br />links to various assessments, it displays a concatenated string of the <br />name of the various assessments. My guess is that the XML parser that<br />generates suitable HTML to be displayed is not properly functioning.<br />Even logging in as a valid user doesn't seem to change the behavior.</p>
<p>Another thing I noticed was that when a user logs in, the browser link<br />displayed is <a class="external" href="http://www.egr.msu.edu/first/metacat">http://www.egr.msu.edu/first/metacat</a> and the page display<br />shows: <br />Authentication successful for user: uid=namilikonda,o=MSU,dc=ecoinformatics,dc=org 58F85F0FFE9DD361CFD4ED520D044E80</p>
<p>Further, when a user goes back to the main page and clicks on <br />"Browse All Assessments", the following information is displayed and<br />all the navigation buttons disappear.</p>
<p>0 0 1 -1 Web-Searchedml://ecoinformatics.org/edmlassessment/durationassessment/titleassessment/@iddataset/dataTable/entityNamelom/general/title/stringlom/general/keyword/stringindividualName/surNameorganizationNameassessmentItems/assessmentItem/assessmentItemId% namilikonda.641.3edmledml://ecoinformatics.org/edml2010-02-152010-03-02Plant BiologyFIRSTFIRSTnamilikonda.654.2namilikonda.653.2namilikonda.652.2namilikonda.651.2namilikonda.650.2namilikonda.660.2namilikonda.659.2namilikonda.658.2namilikonda.657.2namilikonda.656.2namilikonda.655.2namilikonda.682.2namilikonda.681.2namilikonda.680.2namilikonda.679.2namilikonda.678.2namilikonda.677.2namilikonda.676.2namilikonda.675.2namilikonda.674.2namilikonda.673.2namilikonda.672.2namilikonda.671.2namilikonda.670.2namilikonda.669.2namilikonda.696.2namilikonda.695.2namilikonda.694.2namilikonda.693.2namilikonda.692.2UCSBLeinfeldernamilikonda.698.2namilikonda.697.2test021510namilikonda.668.2namilikonda.667.2namilikonda.666.2namilikonda.665.2namilikonda.664.2namilikonda.663.2namilikonda.662.2namilikonda.661.2University of Michigannamilikonda.691.2namilikonda.690.2namilikonda.689.2namilikonda.688.2namilikonda.687.2namilikonda.686.2namilikonda.685.2namilikonda.684.2namilikonda.683.2 JHwan.1140.3edmledml://ecoinformatics.org/edml2010-02-182010-03-02Michigan State UniversityPattersonMichigan State UniversityMichigan State UniversityMerrillBiological Science(Cells and Molecules)JHwan.1227.2JHwan.1226.2JHwan.1225.2JHwan.1224.2JHwan.1223.2JHwan.1222.2JHwan.1221.2JHwan.1220.2JHwan.1219.2JHwan.1218.2JHwan.1217.2JHwan.1216.2JHwan.1215.2JHwan.1214.2JHwan.1213.2JHwan.1212.2JHwan.1211.2JHwan.1210.2JHwan.1209.2JHwan.1208.2JHwan.1207.2JHwan.1206.2JHwan.1205.22005_BS111_Fall_EX2JHwan.1254.2JHwan.1253.2JHwan.1252.2JHwan.1251.2JHwan.1250.2JHwan.1249.2JHwan.1248.2JHwan.1247.2JHwan.1246.2JHwan.1245.2JHwan.1244.2JHwan.1243.2JHwan.1242.2JHwan.1241.2JHwan.1240.2JHwan.1239.2JHwan.1238.2JHwan.1237.2JHwan.1236.2JHwan.1235.2JHwan.1234.2JHwan.1233.2JHwan.1232.2JHwan.1231.2JHwan.1230.2JHwan.1229.2JHwan.1228.2student_response.csvFIRSTFIRST JHwan.4.5edmledml://ecoinformatics.org/edml2010-02-172010-02-17JHwan.557.3JHwan.556.3JHwan.555.3JHwan.554.3JHwan.553.3JHwan.552.3JHwan.551.3JHwan.550.3JHwan.549.3JHwan.548.3JHwan.547.3JHwan.546.3JHwan.545.3JHwan.544.3JHwan.543.3JHwan.542.3JHwan.541.3JHwan.540.3JHwan.539.3JHwan.538.3JHwan.537.3JHwan.536.3JHwan.535.3JHwan.534.3JHwan.533.3JHwan.532.3JHwan.531.3JHwan.530.3JHwan.529.3JHwan.528.32004_BS111_Fall_EX1Biological Science(Cells and Molecules)Michigan State UniversityMichigan State UniversityMerrillJHwan.577.3JHwan.576.3JHwan.575.3JHwan.574.3JHwan.573.3JHwan.572.3JHwan.571.3JHwan.570.3JHwan.569.3JHwan.568.3JHwan.567.3JHwan.566.3JHwan.565.3JHwan.564.3JHwan.563.3JHwan.562.3JHwan.561.3JHwan.560.3JHwan.559.3JHwan.558.3Michigan State UniversityPattersonJHwan.527.3JHwan.526.3student_response.csvFIRSTFIRST namilikonda.422.5edmledml://ecoinformatics.org/edml2010-01-192010-01-19drnnamilikonda.640.1namilikonda.639.1namilikonda.638.1namilikonda.637.1namilikonda.636.1namilikonda.635.1namilikonda.634.1namilikonda.633.1namilikonda.632.1namilikonda.631.1namilikonda.630.1namilikonda.629.1namilikonda.628.1namilikonda.627.1namilikonda.626.1namilikonda.625.1namilikonda.624.1namilikonda.623.1namilikonda.622.1namilikonda.621.1namilikonda.620.1namilikonda.619.1namilikonda.617.1namilikonda.616.1namilikonda.615.1namilikonda.614.1namilikonda.613.1namilikonda.612.1namilikonda.611.1namilikonda.610.1namilikonda.609.1namilikonda.608.1namilikonda.607.1namilikonda.606.1namilikonda.605.1namilikonda.604.1namilikonda.603.1MSUnivnamilikonda.602.1namilikonda.601.1namilikonda.600.1namilikonda.599.1namilikonda.598.1namilikonda.597.1namilikonda.596.1namilikonda.595.1namilikonda.594.1bug4643-skn-testbiosciFIRSTFIRSTnamilikonda.618.1namilikonda.593.1namilikonda.592.1 JHwan.696.3edmledml://ecoinformatics.org/edml2010-02-182010-02-18Michigan State UniversityMerrillBiological Science(Cells and Molecules)Michigan State UniversityPattersonMichigan State UniversityJHwan.1072.1JHwan.1071.1JHwan.1070.1JHwan.1069.1JHwan.1068.1JHwan.1067.1JHwan.1066.1JHwan.1065.1JHwan.1064.1JHwan.1063.1JHwan.1062.1JHwan.1061.1JHwan.1060.1JHwan.1059.1JHwan.1058.1JHwan.1057.1JHwan.1056.1JHwan.1055.1JHwan.1054.1JHwan.1053.1JHwan.1052.1JHwan.1051.1JHwan.1050.1JHwan.1049.1JHwan.1048.1JHwan.1047.1JHwan.1046.1JHwan.1045.1JHwan.1044.1JHwan.1043.1JHwan.1034.1JHwan.1033.1JHwan.1032.1JHwan.1031.1JHwan.1030.1JHwan.1029.1JHwan.1028.1JHwan.1027.1JHwan.1026.1JHwan.1025.1JHwan.1024.1JHwan.1023.1JHwan.1022.1JHwan.1021.1JHwan.1020.1JHwan.1019.1JHwan.1018.1JHwan.1017.1JHwan.1016.1JHwan.1015.1JHwan.1014.1JHwan.1013.1JHwan.1012.1JHwan.1011.1student_response.csvFIRSTFIRSTJHwan.1010.1JHwan.1009.1JHwan.1008.1JHwan.1007.1JHwan.1006.1JHwan.1005.1JHwan.1004.1JHwan.995.1JHwan.994.1JHwan.993.1JHwan.992.1JHwan.991.1JHwan.990.1JHwan.989.1JHwan.988.1JHwan.987.1JHwan.986.1JHwan.985.1JHwan.984.1JHwan.983.1JHwan.982.1JHwan.981.1JHwan.980.1JHwan.979.1JHwan.978.1JHwan.977.1JHwan.976.1JHwan.975.1JHwan.974.1JHwan.973.1JHwan.972.1JHwan.971.1JHwan.1042.1JHwan.1041.1JHwan.1040.1JHwan.1039.1JHwan.1038.1JHwan.1037.1JHwan.1036.1JHwan.1035.1JHwan.970.1JHwan.969.1JHwan.968.1JHwan.1003.1JHwan.1002.1JHwan.1001.1JHwan.1000.1JHwan.999.1JHwan.998.1JHwan.997.1JHwan.996.12004_BS111_Fall_Final JHwan.579.2edmledml://ecoinformatics.org/edml2010-02-182010-02-18Michigan State UniversityMichigan State UniversityMerrillBiological Science(Cells and Molecules)Michigan State UniversityPattersonstudent_response.csvFIRSTFIRSTJHwan.626.1JHwan.625.1JHwan.624.1JHwan.623.1JHwan.620.1JHwan.619.1JHwan.618.1JHwan.617.1JHwan.616.1JHwan.615.1JHwan.614.1JHwan.613.1JHwan.612.1JHwan.611.1JHwan.610.1JHwan.609.1JHwan.608.1JHwan.607.1JHwan.606.1JHwan.605.1JHwan.604.1JHwan.603.1JHwan.602.1JHwan.601.1JHwan.600.1JHwan.599.1JHwan.598.1JHwan.597.1JHwan.596.1JHwan.595.1JHwan.594.1JHwan.593.1JHwan.592.1JHwan.591.1JHwan.590.12004_BS111_Fall_EX2JHwan.622.1JHwan.621.1JHwan.589.1JHwan.588.1JHwan.587.1JHwan.586.1JHwan.585.1 JHwan.628.2edmledml://ecoinformatics.org/edml2010-02-182010-02-18Michigan State UniversityPattersonMichigan State UniversityMerrillBiological Science(Cells and Molecules)Michigan State Universitystudent_response.csvFIRSTFIRSTJHwan.694.1JHwan.693.1JHwan.692.1JHwan.691.1JHwan.690.1JHwan.689.1JHwan.688.1JHwan.687.1JHwan.686.1JHwan.685.1JHwan.684.1JHwan.683.1JHwan.682.1JHwan.681.1JHwan.680.1JHwan.679.1JHwan.678.1JHwan.677.1JHwan.676.1JHwan.675.1JHwan.674.1JHwan.673.1JHwan.672.1JHwan.671.1JHwan.670.1JHwan.664.1JHwan.663.1JHwan.662.1JHwan.661.1JHwan.660.1JHwan.659.1JHwan.658.1JHwan.657.1JHwan.656.1JHwan.655.1JHwan.654.1JHwan.653.1JHwan.652.1JHwan.651.1JHwan.650.1JHwan.649.1JHwan.648.1JHwan.647.1JHwan.646.1JHwan.645.1JHwan.644.1JHwan.643.12004_BS111_Fall_EX3JHwan.669.1JHwan.668.1JHwan.667.1JHwan.666.1JHwan.665.1 JHwan.1074.6edmledml://ecoinformatics.org/edml2010-02-182010-03-02JHwan.1089.6JHwan.1088.6JHwan.1087.6JHwan.1086.62005_BS111_Fall_EX1JHwan.1103.6JHwan.1102.6JHwan.1101.6JHwan.1100.6JHwan.1099.6JHwan.1098.6JHwan.1097.6JHwan.1096.6JHwan.1095.6JHwan.1094.6JHwan.1093.6JHwan.1092.6JHwan.1091.6JHwan.1090.6JHwan.1119.6JHwan.1118.6JHwan.1117.6JHwan.1116.6JHwan.1115.6JHwan.1114.6JHwan.1113.6JHwan.1112.6JHwan.1111.6JHwan.1110.6JHwan.1109.6JHwan.1108.6JHwan.1107.6JHwan.1106.6JHwan.1105.6JHwan.1134.6JHwan.1133.6JHwan.1124.6JHwan.1123.6JHwan.1122.6JHwan.1121.6JHwan.1120.6student_response.csvFIRSTFIRSTJHwan.1138.6JHwan.1137.6JHwan.1136.6JHwan.1135.6JHwan.1104.6Michigan State UniversityMerrillBiological Science(Cells and Molecules)JHwan.1132.6JHwan.1131.6JHwan.1130.6JHwan.1129.6JHwan.1128.6JHwan.1127.6JHwan.1126.6JHwan.1125.6Michigan State UniversityMichigan State UniversityPatterson ben.5.2edmledml://ecoinformatics.org/edml2010-01-202010-01-20FIRSTFIRSTPlant BiologyUCSBLeinfelderUniversity of Michiganben.4.23Midterm B JHwan.1256.2edmledml://ecoinformatics.org/edml2010-02-182010-02-18Michigan State UniversityPattersonMichigan State UniversityMichigan State UniversityMerrillBiological Science(Cells and Molecules)student_response.csvFIRSTFIRSTJHwan.1571.1JHwan.1570.1JHwan.1568.1JHwan.1567.1JHwan.1566.1JHwan.1565.1JHwan.1564.1JHwan.1563.1JHwan.1562.1JHwan.1561.1JHwan.1560.1JHwan.1559.1JHwan.1558.1JHwan.1557.1JHwan.1556.1JHwan.1555.1JHwan.1554.1JHwan.1553.1JHwan.1552.1JHwan.1551.1JHwan.1550.1JHwan.1549.1JHwan.1548.1JHwan.1547.1JHwan.1546.1JHwan.1545.1JHwan.1544.1JHwan.1543.1JHwan.1542.1JHwan.1541.1JHwan.1540.1JHwan.1539.1JHwan.1569.12005_BS111_Fall_EX3JHwan.1538.1JHwan.1537.1JHwan.1536.1JHwan.1535.1JHwan.1534.1JHwan.1533.1JHwan.1532.1JHwan.1531.1JHwan.1530.1JHwan.1529.1JHwan.1528.1JHwan.1527.1JHwan.1526.1JHwan.1525.1JHwan.1524.1JHwan.1523.1JHwan.1522.1JHwan.1521.1 JHwan.1573.2edmledml://ecoinformatics.org/edml2010-02-182010-02-18Michigan State UniversityPattersonMichigan State UniversityMichigan State UniversityMerrillBiological Science(Cells and Molecules)FIRSTFIRSTJHwan.1786.1JHwan.1785.1JHwan.1784.1JHwan.1783.1JHwan.1782.1JHwan.1781.1JHwan.1780.1JHwan.1779.1JHwan.1778.1JHwan.1777.1JHwan.1776.1JHwan.1775.1JHwan.1774.1JHwan.1773.1JHwan.1772.1JHwan.1771.1JHwan.1770.1JHwan.1769.1JHwan.1768.1JHwan.1767.1JHwan.1766.1JHwan.1765.1JHwan.1764.1JHwan.1763.1JHwan.1762.1JHwan.1761.1JHwan.1760.1JHwan.1756.1JHwan.1755.1JHwan.1754.1JHwan.1753.1JHwan.1752.1JHwan.1751.1JHwan.1750.1JHwan.1749.1JHwan.1748.1JHwan.1747.1JHwan.1746.1JHwan.1745.1JHwan.1744.1JHwan.1743.1JHwan.1742.1JHwan.1741.1JHwan.1740.1JHwan.1739.1JHwan.1738.1JHwan.1737.1JHwan.1736.1JHwan.1735.1JHwan.1734.1JHwan.1733.1JHwan.1732.1JHwan.1731.1JHwan.1730.1student_response.csvJHwan.1729.1JHwan.1728.1JHwan.1727.1JHwan.1726.1JHwan.1718.1JHwan.1717.1JHwan.1716.1JHwan.1715.1JHwan.1714.1JHwan.1713.1JHwan.1712.1JHwan.1711.1JHwan.1710.1JHwan.1709.1JHwan.1708.1JHwan.1707.1JHwan.1706.1JHwan.1705.1JHwan.1704.1JHwan.1703.1JHwan.1702.1JHwan.1701.1JHwan.1700.1JHwan.1699.1JHwan.1698.1JHwan.1697.1JHwan.1696.1JHwan.1695.1JHwan.1694.1JHwan.1693.1JHwan.1692.1JHwan.1759.1JHwan.1758.1JHwan.1757.1JHwan.1691.1JHwan.1690.1JHwan.1689.1JHwan.1688.1JHwan.1725.1JHwan.1724.1JHwan.1723.1JHwan.1722.1JHwan.1721.1JHwan.1720.1JHwan.1719.1JHwan.1687.1JHwan.1686.12005_BS111_Fall_Final namilikonda.535.3edmledml://ecoinformatics.org/edml2010-01-192010-01-19namilikonda.541.2Jan19-test2namilikonda.555.2namilikonda.554.2namilikonda.553.2namilikonda.552.2namilik</p> Bug #4863 (Resolved): Assessments saved on the server and opened on a non-local machine do not di...https://projects.ecoinformatics.org/ecoinfo/issues/48632010-03-02T23:13:58ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>Assessments that are created and saved on to the network using Morpho<br />and later reopened on the same machine as the one used for creating it,<br />by the same user, display the assessment items, corresponding images, <br />and the original document, correctly. But, when a different machine<br />is used or when a different user tries to open the same assessment,<br />all the images (irrespective of if they are in the foils or not)<br />go missing!</p>
<p>The XML documents corresponding to the assessment items do seem to <br />have valid Ecogrid URIs. Ideally, the Morpho interface should be able<br />to access the image from the server and display it in conjunction to<br />the local copy of the XML document. So, why doesn't this happen?</p> Bug #4585 (Resolved): Parser fails to launch from within Morpho!https://projects.ecoinformatics.org/ecoinfo/issues/45852009-11-26T01:39:49ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>Using the latest Morpho build, when creating a new package or re-visiting an<br />existing assessment, the parser component cannot be launched with the console<br />displaying the following messages and errors.</p>
<p>(NOTE: The following only shows messages output corresponding to the object <br />that resulted in the error. The messages below were generated when trying to<br />re-open a parsed assessment by clicking "Assessment Items" option under<br />"Documentation" menu on the Morpho interface.)</p>
<p>Creating new DataPackage Object<br />id: namilikonda.41.4<br />location: local<br />opening local file<br />local file opened<br />Current ClassLoader is: sun.misc.Launcher$AppClassLoader<br />Parser created is: org.apache.xerces.jaxp.DocumentBuilderImpl<br />Current ClassLoader is: sun.misc.Launcher$AppClassLoader<br />Parser created is: org.apache.xerces.jaxp.DocumentBuilderImpl<br />the second line string is: edml:edml packageId="namilikonda.41.4" system="first" xmlns:edml="edml://ecoinformatics.org/edml" xmlns:lom="http://ltsc.ieee.org/xsd/LOM" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="edml://ecoinformatics.org/edml edml.xsd" <br />Creating new DataPackage Object<br />id: namilikonda.41.4<br />location: local<br />opening local file<br />local file opened<br />Current ClassLoader is: sun.misc.Launcher$AppClassLoader<br />Parser created is: org.apache.xerces.jaxp.DocumentBuilderImpl<br />Current ClassLoader is: sun.misc.Launcher$AppClassLoader<br />Parser created is: org.apache.xerces.jaxp.DocumentBuilderImpl<br />The external package is namilikonda.41.4<br />The reference id in external package is 1236231088109<br />Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException<br /> at java.util.Calendar.setTime(Unknown Source)<br /> at java.text.SimpleDateFormat.format(Unknown Source)<br /> at java.text.SimpleDateFormat.format(Unknown Source)<br /> at java.text.DateFormat.format(Unknown Source)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.pages.AssessmentPage.getPageData(AssessmentPage.java:652)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.pages.AssessmentPage.rememberPreviousValues(AssessmentPage.java:934)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.pages.AssessmentPage.onLoadAction(AssessmentPage.java:515)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.EdMLWizardContainerFrame.setCurrentPage(EdMLWizardContainerFrame.java:182)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.EdMLWizardContainerFrame.nextAction(EdMLWizardContainerFrame.java:506)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.EdMLWizardContainerFrame$7.actionPerformed(EdMLWizardContainerFrame.java:409)<br /> at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)<br /> at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)<br /> at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)<br /> at javax.swing.DefaultButtonModel.setPressed(Unknown Source)<br /> at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown Source)<br /> at java.awt.Component.processMouseEvent(Unknown Source)<br /> at javax.swing.JComponent.processMouseEvent(Unknown Source)<br /> at java.awt.Component.processEvent(Unknown Source)<br /> at java.awt.Container.processEvent(Unknown Source)<br /> at java.awt.Component.dispatchEventImpl(Unknown Source)<br /> at java.awt.Container.dispatchEventImpl(Unknown Source)<br /> at java.awt.Component.dispatchEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)<br /> at java.awt.Container.dispatchEventImpl(Unknown Source)<br /> at java.awt.Window.dispatchEventImpl(Unknown Source)<br /> at java.awt.Component.dispatchEvent(Unknown Source)<br /> at java.awt.EventQueue.dispatchEvent(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEvents(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEvents(Unknown Source)<br /> at java.awt.EventDispatchThread.run(Unknown Source)<br />Wizard complete - Will now create an AbstractDataPackage..<br />AbstractDataPackage complete<br />/xpathKeyMap/contextNode[@name='package']/accessionNumber maps to [#text: /*[local-name()='edml']/@packageId]<br />node path is /*[local-name()='edml']/@packageId<br />setting value to temporary.1.1<br />Exception in thread "AWT-EventQueue-0" java.lang.AbstractMethodError: edu.ucsb.nceas.morpho.first.edml.EdmlPackagePlugin.openNewDataPackage(Ledu/ucsb/nceas/morpho/datapackage/AbstractDataPackage;Ledu/ucsb/nceas/morpho/framework/ButterflyFlapCoordinator;)Ledu/ucsb/nceas/morpho/framework/MorphoFrame;<br /> at edu.ucsb.nceas.morpho.first.edml.commands.CreateNewDataPackageCommand$1.wizardComplete(CreateNewDataPackageCommand.java:102)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.EdMLWizardContainerFrame.finishAction(EdMLWizardContainerFrame.java:526)<br /> at edu.ucsb.nceas.morpho.first.plugins.wizard.EdMLWizardContainerFrame$8.actionPerformed(EdMLWizardContainerFrame.java:415)<br /> at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)<br /> at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)<br /> at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)<br /> at javax.swing.DefaultButtonModel.setPressed(Unknown Source)<br /> at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown Source)<br /> at java.awt.Component.processMouseEvent(Unknown Source)<br /> at javax.swing.JComponent.processMouseEvent(Unknown Source)<br /> at java.awt.Component.processEvent(Unknown Source)<br /> at java.awt.Container.processEvent(Unknown Source)<br /> at java.awt.Component.dispatchEventImpl(Unknown Source)<br /> at java.awt.Container.dispatchEventImpl(Unknown Source)<br /> at java.awt.Component.dispatchEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)<br /> at java.awt.Container.dispatchEventImpl(Unknown Source)<br /> at java.awt.Window.dispatchEventImpl(Unknown Source)<br /> at java.awt.Component.dispatchEvent(Unknown Source)<br /> at java.awt.EventQueue.dispatchEvent(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEvents(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEvents(Unknown Source)<br /> at java.awt.EventDispatchThread.run(Unknown Source)<br />Parser created is: org.apache.xerces.parsers.SAXParser<br />Created root query group.<br />(2) Executing local query...<br />(3.0) Creating DOM parser...<br />Current ClassLoader is: sun.misc.Launcher$AppClassLoader<br />Parser created is: org.apache.xerces.jaxp.DocumentBuilderImpl<br />(3.1) DOM parser created...<br />selectedId is: namilikonda.918.2<br />the package name is: namilikonda.918<br />the number of previous version is: 1<br />selectedId is: namilikonda.918.2<br />the package name is: namilikonda.918<br />the number of previous version is: 1<br />DataPackage: Got service request to open: namilikonda.918.2 from local.<br />the second line string is: edml:edml packageId="namilikonda.918.2" system="first" xmlns:edml="edml://ecoinformatics.org/edml" xmlns:lom="http://ltsc.ieee.org/xsd/LOM" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="edml://ecoinformatics.org/edml edml.xsd" <br />Creating new DataPackage Object<br />id: namilikonda.918.2<br />location: local<br />opening local file<br />local file opened<br />Current ClassLoader is: sun.misc.Launcher$AppClassLoader<br />Parser created is: org.apache.xerces.jaxp.DocumentBuilderImpl<br />Current ClassLoader is: sun.misc.Launcher$AppClassLoader<br />Parser created is: org.apache.xerces.jaxp.DocumentBuilderImpl<br />Adding window: Data Package: namilikonda.918.2<br />ViewContainer startUp time: 281<br />entityList is null!<br />genericName: /xpathKeyMap/contextNode[@name='package']/title<br />path: /*[local-name()='edml']/assessment/title<br /> Document root node has 6 attributes<br />genericName: /xpathKeyMap/contextNode[@name='package']/accessionNumber<br />path: /*[local-name()='edml']/@packageId<br /> Document root node has 6 attributes<br />EntityItems vector is null<br />XMLTransformer: ClassLoader <strong>would</strong> have been: sun.misc.Launcher$AppClassLoader<br />XMLTransformer: ...but from Morpho, setting ClassLoader to: sun.misc.Launcher$AppClassLoader<br />genericName: /xpathKeyMap/contextNode[@name='package']/accessionNumber<br />path: /*[local-name()='edml']/@packageId<br /> Document root node has 6 attributes<br />DVCP startUp time: 2156<br />genericName: /xpathKeyMap/contextNode[@name='package']/accessionNumber<br />path: /*[local-name()='edml']/@packageId<br /> Document root node has 6 attributes<br />Exception in thread "AWT-EventQueue-0" java.lang.StringIndexOutOfBoundsException: String index out of range: -1<br /> at java.lang.String.substring(Unknown Source)<br /> at edu.ucsb.nceas.morpho.datapackage.AccessionNumber.getParts(AccessionNumber.java:283)<br /> at edu.ucsb.nceas.morpho.first.edml.commands.RunAssessmentParseCommand.execute(RunAssessmentParseCommand.java:76)<br /> at edu.ucsb.nceas.morpho.util.GUIAction.actionPerformed(GUIAction.java:410)<br /> at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)<br /> at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)<br /> at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)<br /> at javax.swing.DefaultButtonModel.setPressed(Unknown Source)<br /> at javax.swing.AbstractButton.doClick(Unknown Source)<br /> at javax.swing.plaf.basic.BasicMenuItemUI.doClick(Unknown Source)<br /> at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(Unknown Source)<br /> at java.awt.AWTEventMulticaster.mouseReleased(Unknown Source)<br /> at java.awt.Component.processMouseEvent(Unknown Source)<br /> at javax.swing.JComponent.processMouseEvent(Unknown Source)<br /> at java.awt.Component.processEvent(Unknown Source)<br /> at java.awt.Container.processEvent(Unknown Source)<br /> at java.awt.Component.dispatchEventImpl(Unknown Source)<br /> at java.awt.Container.dispatchEventImpl(Unknown Source)<br /> at java.awt.Component.dispatchEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)<br /> at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)<br /> at java.awt.Container.dispatchEventImpl(Unknown Source)<br /> at java.awt.Window.dispatchEventImpl(Unknown Source)<br /> at java.awt.Component.dispatchEvent(Unknown Source)<br /> at java.awt.EventQueue.dispatchEvent(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEvents(Unknown Source)<br /> at java.awt.EventDispatchThread.pumpEvents(Unknown Source)<br /> at java.awt.EventDispatchThread.run(Unknown Source)</p> Bug #4536 (Resolved): IE6 causes socket connection error on downloadhttps://projects.ecoinformatics.org/ecoinfo/issues/45362009-11-06T20:52:51Zben leinfelderleinfelder@nceas.ucsb.edu
<p>When attempting to download with IE6 - there is a "Broken pipe" SocketConnection exception thrown when flushing the response.</p> Bug #4452 (Resolved): Meta data associated with assessement items is incorrectly retrieved in the...https://projects.ecoinformatics.org/ecoinfo/issues/44522009-10-14T21:32:13ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>Jay created a new assessment called Permission Test 1 with 8 questions, <br />each of which had one or more meta data associated with. We then looked at<br />four places to confirm that meta data was being retrieved correctly.<br />a) XML file saved locally<br />b) The parser interface when the assessment is re-opened<br />c) On the FIRST website by viewing the details about an assessment, and<br />d) Downloaded data package.</p>
<p>Case 1: Multiple Bloom and NBII metadata added</p>
<ul>
<li>Five distinct metadata items on the whole added to the assessment.</li>
<li>Q1 has both bloom and nbii items</li>
</ul>
<pre><code>- XML file: No errors<br /> - Parser: No errors (all meta data displayed correctly)<br /> - Website: No errors (all meta data displayed correctly when the<br /> details link is clicked)<br /> - Download: * One item is completely missing
* For another item, the thesarus category is completely<br /> missing and all the questions have a TRUE value in that<br /> row!</code></pre>
<pre><code>Incorrectly retrieving metadata on the transpose<br /> e.g., missing items, missing metadata class, and<br /> incorrect association of meta data to <br /> questions</code></pre>
<pre><code>Non-transpose data set missing meta data items on<br /> multiple questions. Although, there were questions<br /> for which one meta data per source (Bloom and NBII)<br /> was listed.</code></pre>
<p>Case 2: Multiple Bloom, NBII, and manually added meta data to Permission Test 1</p>
<pre><code>- XML file: No errors<br /> - Parser: No errors<br /> - Website: No errors<br /> - Download: Similar errors as above</code></pre> Bug #4451 (Resolved): Permissions granted cannot seem to be revokablehttps://projects.ecoinformatics.org/ecoinfo/issues/44512009-10-14T21:16:14ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>Two types of permissions can be set via Morpho interface<br />a) Under Documentation -> Access information</p>
<pre><code>This option allows user to grant access to the assessment items.<br /> So, this would enable a user to view assessment items on the <br /> website.</code></pre>
<p>b) Under Data -> Edit data access</p>
<pre><code>This option is used to grant permission to download student<br /> score and response data.</code></pre>
<p>Test case 1: Permission granted to a single user to view assessment items only</p>
<pre><code>- The user could successfully view the assessment items on the <br /> website. Further, the user could also download the student data,<br /> which should not have been the case.</code></pre>
<p>Test case 2: Permission revoked by explicitly choosing the user's name<br /> from the drop down list and opting to "deny" access</p>
<pre><code>- The user was still able to view as well as download assessment</code></pre>
<p>Test case 3: Permission granted to a group (FIRST group)</p>
<pre><code>- All the auhtorized members of FIRST group were able to access<br /> the assessment.<br /> - Similar to Test case 2, revoking the access does not seem to<br /> affect the user's ability to view and download assessment!</code></pre>
<p>Test case 4: Public and private access seems appropriately functional</p>
<pre><code>- Once public access is granted for an assessment, it remains<br /> that way even if we explicitly change the access rights to private.</code></pre>
<p>PS: The above trials were run on "Permission Test 1"</p> Bug #4415 (Resolved): Retry save to metacat (once) in cases where upload errors are unclearhttps://projects.ecoinformatics.org/ecoinfo/issues/44152009-09-24T20:07:17Zben leinfelderleinfelder@nceas.ucsb.edu
<p>This is to buffer against possible errors that occurred that are unrelated to invalid XML or Metacat errors. Floods, fire, etc...</p> Bug #4414 (Resolved): Only 1 item-level metadata tag is downloaded with data filehttps://projects.ecoinformatics.org/ecoinfo/issues/44142009-09-24T20:01:43Zben leinfelderleinfelder@nceas.ucsb.edu
<p>first values seems to be repeated and others are ignored. Same is true for transpose version of data download</p> Bug #4413 (Resolved): Set access for response PDFs to be same as data filehttps://projects.ecoinformatics.org/ecoinfo/issues/44132009-09-24T19:59:50Zben leinfelderleinfelder@nceas.ucsb.edu
<p>Currently these resources are not assigned anything but the default permissions</p> Bug #4412 (Resolved): Include download link for response PDFshttps://projects.ecoinformatics.org/ecoinfo/issues/44122009-09-24T19:46:00Zben leinfelderleinfelder@nceas.ucsb.edu
<p>Student responses stored in external files (PDFs) are being tracked and uploaded as part of the data file. But they are not included as part of the downloaded data.<br />They should appear as normal, clickable URLs for the PDFs</p> Bug #4389 (Resolved): "Edit Metadata Fields" option does not allow clearing out already selected ...https://projects.ecoinformatics.org/ecoinfo/issues/43892009-09-16T04:48:22ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>When a data package is added to the data cart and user chooses to edit the<br />metadata fields that get displayed in the downloaded .csv file, a user <br />does not have an option to discard all or a few of the fields already selected.<br />In fact, once a few fields are selected and the "save selection" option is<br />selected, the user has to select at least one field in order to change the<br />selection any further.</p> Bug #4387 (Resolved): Query search, based on item-level metadata fails!https://projects.ecoinformatics.org/ecoinfo/issues/43872009-09-14T15:56:35ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>It does not appear that queries are searching item-level meta data.</p>
<p>For a test case created by Jay to test retrieval of assessments based on item level meta data (jlee.2758.*), with Bloom meta data associated with each item <br />when it was uploaded. The downloaded package actually shows all the meta data.</p>
<p>But, when we query for Bloom meta data (e.g., Evaluation) the server returns<br />"0 items found" when the item with qid jlee.2764_1 clearly has that meta data<br />associated.</p>
<p>Then, Jay associated a keyword "Comprehension" to the assessment itself and<br />uploaded the revised package. Now, when we perform a query with search string<br />"Comprehension" under Keyword field, the relevant document was retrieved showing <br />that the server was only searching assessment level meta data.</p> Bug #4386 (Resolved): Trouble loading assessment items!https://projects.ecoinformatics.org/ecoinfo/issues/43862009-09-14T15:34:46ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>The FIRST website seems to have unusually long turnaround time with displaying<br />assessment items when a user clicks on the "details" link associated with an <br />assessment! The same functionality works pretty fast on Bespin.</p> Bug #4385 (Resolved): FIRST website usability issue: Cannot add an assessment to datacart from a ...https://projects.ecoinformatics.org/ecoinfo/issues/43852009-09-14T14:32:25ZSandeep Namilikondasandeep.namilikonda@gmail.com
<p>When a user clicks on an assessment to view its metadata and item details<br />on FIRST website, there is no option on the new page generated to actually <br />add that assessment to the data cart. The user has to go back to the page that<br />displays the list of assessments to be able to add it to the data cart, which is<br />not that user-friendly!</p>