Kepler: Issueshttps://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362011-10-25T15:47:23ZEcoinformatics Redmine
Redmine Bug #5512 (Resolved): Provenance module does not work with MySQL (RecordingException: com.mysql.j...https://projects.ecoinformatics.org/ecoinfo/issues/55122011-10-25T15:47:23ZDavid LeBauerdlebauer@gmail.com
<p>After editing Provenance Recorder to store in MySQL, I received the following error:</p>
<p>ptolemy.kernel.util.IllegalActionException: RecordingException: com.mysql.jdbc.MysqlDataTruncation: Data truncation: Data too long for column 'module_dependencies' at row 1<br /> in .pecan.Provenance Recorder<br /> at org.kepler.provenance.ProvenanceRecorder.preinitialize(ProvenanceRecorder.java:544)<br /> at ptolemy.actor.CompositeActor.preinitialize(CompositeActor.java:1363)<br /> at ptolemy.actor.Manager.preinitializeAndResolveTypes(Manager.java:983)<br /> at ptolemy.actor.Manager.initialize(Manager.java:643)<br /> at ptolemy.actor.Manager.execute(Manager.java:340)<br /> at ptolemy.actor.Manager.run(Manager.java:1162)<br /> at ptolemy.actor.Manager$3.run(Manager.java:1215)</p>
<p>The provenanceDB was successfully created and filled out. Bug is not reproduced in a minimal example (perhaps because output is much less). I could do a mysqldump if it would help.</p> Bug #5203 (Resolved): Kepler wont starthttps://projects.ecoinformatics.org/ecoinfo/issues/52032010-10-18T17:01:17ZDavid LeBauerdlebauer@gmail.com
<p>I usually start Kepler with the command ./Kepler-2.0/kepler.sh</p>
<p>Today, this gives me the error below. Reinstalling Kepler and Java do not help.</p>
<p>Here is the output:</p>
<p>dlebauer@dlebauer-desktop:~$ ./Kepler-2.0/kepler.sh <br /> [null] Exception in thread "main" java.lang.NoClassDefFoundError: org/kepler/Kepler<br /> [null] Caused by: java.lang.ClassNotFoundException: org.kepler.Kepler<br /> [null] at java.net.URLClassLoader$1.run(URLClassLoader.java:202)<br /> [null] at java.security.AccessController.doPrivileged(Native Method)<br /> [null] at java.net.URLClassLoader.findClass(URLClassLoader.java:190)<br /> [null] at java.lang.ClassLoader.loadClass(ClassLoader.java:307)<br /> [null] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)<br /> [null] at java.lang.ClassLoader.loadClass(ClassLoader.java:248)<br /> [null] Could not find the main class: org.kepler.Kepler. Program will exit.<br />Exception in thread "main" Java returned: 1<br /> at org.kepler.build.modules.ModulesTask.execute(ModulesTask.java:105)<br /> at org.kepler.build.runner.Kepler.main(Kepler.java:78)<br />Caused by: Java returned: 1<br /> at org.apache.tools.ant.taskdefs.Java.execute(Java.java:108)<br /> at org.kepler.build.Run.runSuite(Run.java:298)<br /> at org.kepler.build.Run.run(Run.java:202)<br /> at org.kepler.build.modules.ModulesTask.execute(ModulesTask.java:101)<br /> ... 1 more<br />--- Nested Exception ---<br />Java returned: 1<br /> at org.apache.tools.ant.taskdefs.Java.execute(Java.java:108)<br /> at org.kepler.build.Run.runSuite(Run.java:298)<br /> at org.kepler.build.Run.run(Run.java:202)<br /> at org.kepler.build.modules.ModulesTask.execute(ModulesTask.java:101)<br /> at org.kepler.build.runner.Kepler.main(Kepler.java:78)</p>