Kepler: Issueshttps://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362004-09-01T05:16:45ZEcoinformatics Redmine
Redmine Bug #1666 (Resolved): Create actor(s) for openModeller frameworkhttps://projects.ecoinformatics.org/ecoinfo/issues/16662004-09-01T05:16:45ZRicardo Pereirarpereira@ku.edu
<p>Need to create actors for openModeller Ecological Niche Modeling framework.</p>
<p>Potential actors to be created:</p>
<p>openModeller: Create Model<br />openModeller: Projection<br />openModeller: Sample</p>
<p>These actors will replace current GARP actors and correspondent C++ code in <br />Kepler.</p> Bug #1660 (Resolved): Add QueryBuilder to the Data Actorshttps://projects.ecoinformatics.org/ecoinfo/issues/16602004-08-23T18:38:08ZRod Spearsrods@ku.edu
<p>Need to add a query object to the Data Actors and be able to invoke the Query<br />Builder to make changes to it</p> Bug #1644 (Resolved): Image Display actor enhancements neededhttps://projects.ecoinformatics.org/ecoinfo/issues/16442004-07-23T23:19:18ZDan Higginshiggins@nceas.ucsb.edu
<p>Version 4.0 of PTII includes a set of ImageProcessing actors under the<br />"moreLibraries/Generic" category. Included are ImageDisplay and ImageReader<br />actors. These actors are currently rather 'fragile' (catgory "Red") and some<br />additional capabilities would be very useful. e.g. scrollbars on containers<br />where images are displayed, ability to scale the display, create a display from<br />an arbitrary stream or data set, etc.</p> Bug #1595 (Resolved): Create Advance Query Builder UIhttps://projects.ecoinformatics.org/ecoinfo/issues/15952004-06-08T11:56:05ZRod Spearsrods@ku.edu
<p>Create a UI to enabled a user to specifiy a query for an access actor (Query<br />Builder)</p>
<p>The QB will take as input:<br />1) Nothing<br />2) A kepler\src\org\ecoinformatics\seek\datasource object</p>
<p>The ouput:<br />A composite query object representing the query (with joins and where clause)</p>
<p>Rough Sketch:<br />The UI contain two panes:</p>
<p>1) The upper pane <br /> a) Shows all the tables defined in the database.<br /> b) The user will be able to D&D fields from one table to another to define<br /> foreign keys and/or table joins.</p>
<p>2) The lower pane will contain a tab control with two tabs<br /> a) The less advanced tab will enable a user to enter the defeinition of a<br /> where clause and all the items and their conditions will be grouped <br /> by either an "and" or an "or". The text will read "Must meet all of <br /> the conditions" or "Must meet at least one of the conditions" </p>
<pre><code>b) The advanced tab will enable a a user specify a much more complex, <br /> nested version of "ands" and "ors" This UI will look very close to the<br /> the Query Builder UI for the Ecogrid (See below)</code></pre>
<p>Description of UI for Advanced UI of the lower tab:<br /><AND><br /> <the condition goes here><br /> <OR><br /> <another condition goes here><br /> <another condition goes here><br /> </OR><br /></AND></p> Bug #1581 (Resolved): "New actor" instantiated from command line application and saving actors in...https://projects.ecoinformatics.org/ecoinfo/issues/15812004-05-26T20:04:08ZEfrat Jaegerjaeger@ecoinformatics.org
<p>Something between the "New Actor" and the "command line" actor. The New actor <br />will be instantiated to perform the command. The actor creator will take care <br />of specifying the necessary inputs and outputs types.</p>
<p>Add the save in library method a parameter for specifying a specific library <br />for storing the actor.</p> Bug #1579 (Resolved): need sub-sampling actorhttps://projects.ecoinformatics.org/ecoinfo/issues/15792004-05-25T16:36:07ZMatt Jonesjones@nceas.ucsb.edu
<p>We need an actor that can perform various sub-sampling functions such as<br />jackknife and bootstrapping operations. Most ecologists use R and similar<br />systems for this type of work. We specifically need to do some<br />spatially-explicit sub-sampling for the GARP pipeline. In addition, we could<br />probably create a sub-sampling actor as a composite actor that uses the ptolemy<br />signal processing actors.</p> Bug #1545 (Resolved): need SAS actorhttps://projects.ecoinformatics.org/ecoinfo/issues/15452004-04-30T17:50:07ZMatt Jonesjones@nceas.ucsb.edu
<p>Need an actor that can execute SAS jobs. Initially start by implementing this<br />locally, possibly utilizing the commandline actor. In addition, we might want<br />to build an (authenticated for licensing) web service that allows these jobs to<br />be executed on remote nodes.</p> Bug #1544 (Resolved): complete web service actorhttps://projects.ecoinformatics.org/ecoinfo/issues/15442004-04-30T17:45:55ZMatt Jonesjones@nceas.ucsb.edu
<p>Fix web service actor code --> Ilkay, Chad</p>
<p>This involves completing the code for a wider variety of data types, and making<br />sure that we support arrays.</p>
<p>1) New architecture for the class<br />2) Multiple output<br />3) Use java APIs<br />4) Add additional type support --> To support arrays of {int, short, long,<br />string, double, float, boolean}; Date</p> Bug #1359 (Resolved): Test bug for the SDM Users group, please ignorehttps://projects.ecoinformatics.org/ecoinfo/issues/13592004-03-04T16:43:23ZMatt Jonesjones@nceas.ucsb.edu
<p>This is a bugzilla test, please ignore.</p> Bug #1343 (Resolved): need full eml2 supporthttps://projects.ecoinformatics.org/ecoinfo/issues/13432004-02-10T17:00:54ZChad Berkleyberkley@nceas.ucsb.edu
<p>need to be able to read data files that are described by the complex textFormat<br />fields in EML2. right now the ingestor only uses the simpleDelimited fields for<br />parsing. See dataTable/physical/dataFormat/textFormat/complex in eml</p> Bug #1342 (Resolved): need R actorhttps://projects.ecoinformatics.org/ecoinfo/issues/13422004-02-10T16:56:48ZChad Berkleyberkley@nceas.ucsb.edu
<p>create an actor to execute R jobs via kepler. Later, establish a GridService<br />that can handle this for us.</p> Bug #1338 (Resolved): find GIS system for inclusion in keplerhttps://projects.ecoinformatics.org/ecoinfo/issues/13382004-02-09T19:14:52ZChad Berkleyberkley@nceas.ucsb.edu
<p>need to look at the various proposed solutions for GIS integration into Kepler.<br /> The possibilities that I've heard so far are GDAL and GRASS. It has also been<br />mentioned that the more basic GIS functionality could probably be implemented in<br />java or with a ptolemy pipeline using existing actors.</p> Bug #1333 (Resolved): finish back propegation actorhttps://projects.ecoinformatics.org/ecoinfo/issues/13332004-02-09T16:39:14ZChad Berkleyberkley@nceas.ucsb.edu
<p>the back propegation neural network actor needs to be finished off with correct<br />input and output ports. need to think about integrating it into the full garp<br />pipeline when figuring out what ports it needs.</p> Bug #1189 (Resolved): add full support for EML2 comple textFormat in EML ingestorhttps://projects.ecoinformatics.org/ecoinfo/issues/11892003-10-21T16:19:35ZChad Berkleyberkley@nceas.ucsb.edu
<p>need to be able to read data files that are described by the complex textFormat<br />fields in EML2. right now the ingestor only uses the simpleDelimited fields for<br />parsing. See dataTable/physical/dataFormat/textFormat/complex.</p> Bug #1143 (In Progress): need SAS actorhttps://projects.ecoinformatics.org/ecoinfo/issues/11432003-09-15T18:03:34ZMatt Jonesjones@nceas.ucsb.edu
<p>Need to be able to run SAS jobs from within Ptolemy. Initially this could be a<br />port of the Monarch engine that hadles this.</p>
<p>Later on this could be run by having SAS on a server exposed as a Grid Service,<br />and therefore accessible through a GridService agent in Ptolemy. I'll post a<br />separte bug for creating GridService agents.</p>
<p>To close this bug, simply create an initial mechanism for running SAS jobs from<br />within Ptolemy.</p>