Kepler: Issueshttps://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362008-02-05T22:06:23ZEcoinformatics Redmine
Redmine Bug #3134 (Resolved): demo workflow 02-LotkaVolterraPredatorPrey.xml needs windows resavedhttps://projects.ecoinformatics.org/ecoinfo/issues/31342008-02-05T22:06:23ZChad Berkleyberkley@nceas.ucsb.edu
<p>The windows were saved over top of one another. If they are tiled, then resaved, it will be easier for people to see the output.</p> Bug #3131 (Resolved): R is not added to the pathhttps://projects.ecoinformatics.org/ecoinfo/issues/31312008-02-05T21:31:32ZChad Berkleyberkley@nceas.ucsb.edu
<p>The errors cxh got with R seem to be coming from the fact that R is installed, but not put into the path on windows. I'm trying to figure out how to do that with IzPack right now.</p> Bug #3129 (Resolved): links exist to ptII demos that do not workhttps://projects.ecoinformatics.org/ecoinfo/issues/31292008-02-05T21:18:43ZChad Berkleyberkley@nceas.ucsb.edu
<p>There are links in the documentation for kepler to ptII demos that don't work. These demos need to be pulled out. The plan is to create a list of ptII demos that do work and eliminate the link to the ptolemy documentation from which they are currently linked.</p> Bug #3123 (Resolved): Change icons to be kepler specifichttps://projects.ecoinformatics.org/ecoinfo/issues/31232008-02-01T23:54:58ZChad Berkleyberkley@nceas.ucsb.edu
<p>Icons installed by the kepler installer need to be the kepler icons instead of the generic ones.</p> Bug #3105 (Resolved): Getting Started link on Welcome Page should lead to demoshttps://projects.ecoinformatics.org/ecoinfo/issues/31052008-01-29T00:19:50ZChristopher Brookscxh@eecs.berkeley.edu
<p>This might be old news, but I'll report it anyway.</p>
<p>When I start up Kepler, the "Welcome" window has a link "Getting Started",<br />which leads to kepler/configs/kepler/introScientists-beta1.htm</p>
<p>introScientists-beta1.htm should have a link to <br />kepler/src/configs/ptolemy/configs/kepler/introScientists.htm<br />or else perhaps the Welcome Window should link directly to introScientists.htm<br />It is important that the demos be easily visble to new users.</p> Bug #3099 (Resolved): GetDocumentationAction.java needs to be moved into pII sourcehttps://projects.ecoinformatics.org/ecoinfo/issues/30992008-01-24T02:20:47Zben leinfelderleinfelder@nceas.ucsb.edu
<p>Rather than maintain a copy of this class in the src/exp directory, it should be included in in the ptolemy project. AKA "folded into" the pII tree.<br />The class has been appropriately parameterized to behave as it originally did unless there is a "_multipleDocumentationAllowed" configuration parameter found.</p>
<p>This is a follow up to bug <a class="issue tracker-1 status-3 priority-2 priority-default closed" title="Bug: Multiple Documentation windows not possible (Resolved)" href="https://projects.ecoinformatics.org/ecoinfo/issues/3053">#3053</a></p> Bug #3092 (Resolved): sampling_occurrenceData_ R.xml demo workflowhttps://projects.ecoinformatics.org/ecoinfo/issues/30922008-01-23T00:49:40ZShawn Bowersbowers@gonzaga.edu
<p>This demo workflow does not run properly because a hard-coded path is used for the file.</p> Bug #3090 (Resolved): ASC2RAWTest demo workflow errorhttps://projects.ecoinformatics.org/ecoinfo/issues/30902008-01-23T00:18:29ZShawn Bowersbowers@gonzaga.edu
<p>When I try to run this workflow I get the java exception:</p>
<p>Cannot open file or URL in .ASC2RAWTest.Layer List Reader.fileOrURL<br />Because: <br />.../demos/ENM/layerList.txt (No such file or directory)</p> Bug #3089 (Resolved): Actor port properties lost after saving to libraryhttps://projects.ecoinformatics.org/ecoinfo/issues/30892008-01-23T00:12:52ZShawn Bowersbowers@gonzaga.edu
<p>If I select an actor (e.g., Garp Prediction), add a semantic type to one of its input ports, and save it back to the library (e.g., as My Garp Prediction), when I drag the actor back onto the canvas, the semantic type property is no longer available (it somehow was "lost in translation"). This happens with the latest version/update of Kepler and PTII (02/22/08).</p> Bug #3086 (Resolved): Error with kepler20080122.zip version (PTII?)https://projects.ecoinformatics.org/ecoinfo/issues/30862008-01-22T21:43:22ZDan Higginshiggins@nceas.ucsb.edu
<p>The nightly zipped version (kepler20080122) ends up having a recurring error shown in the terminal when the cursor is moved over the workflow display area.<br />The error appears in diva.canvas.BasicZList (see below) when executed using kepler.bat (Windows) or kepler.sh (Mac). Kepler seems to work OK, but error keeps appearing. Does not occur in keplwe20080118 so maybe a recent change in Ptolemy code?</p>
<p>Exception in thread "AWT-EventQueue-0" java.util.NoSuchElementException: Can't g<br />et 0'th element from BasicZList of size 0<br /> at diva.canvas.BasicZList$GSet$1.hasNext(BasicZList.java:253)<br /> at diva.canvas.CanvasUtilities.pick(CanvasUtilities.java:432)<br /> at diva.canvas.FigureLayer.pick(FigureLayer.java:423)<br /> at diva.canvas.FigureLayer.getFigure(FigureLayer.java:634)<br /> at diva.canvas.FigureLayer.processLayerMotionEvent(FigureLayer.java:778)</p>
<pre><code>at diva.canvas.FigureLayer.dispatchEvent(FigureLayer.java:209)<br /> at diva.canvas.CanvasPane.processLayerEvent(CanvasPane.java:280)<br /> at diva.canvas.CanvasPane.dispatchEvent(CanvasPane.java:89)<br /> at diva.canvas.JCanvas.internalProcessMouseEvent(JCanvas.java:465)<br /> at diva.canvas.JCanvas.processMouseEvent(JCanvas.java:419)</code></pre> Bug #3055 (Resolved): DarwinCoreDatasource actor does not work in wit output 'As Field'https://projects.ecoinformatics.org/ecoinfo/issues/30552008-01-09T05:24:58ZDan Higginshiggins@nceas.ucsb.edu
<p>The DarwinCoreDataSource actor can have its output set to 'As Field'. However, it then appears not to iterate through all the data in a column. Instead the first value in the column is repeatedly sent.</p> Bug #3054 (Resolved): Importing a kar file claims actor is already cachedhttps://projects.ecoinformatics.org/ecoinfo/issues/30542008-01-08T20:41:28ZChad Berkleyberkley@nceas.ucsb.edu
<p>If you try to import a kar file containing a composite, sometimes an error is thrown that the actor already exists in the cache. I'm not sure if this is an lsid or naming error. it should ask the user to change the name/id if there is a conflict with either.</p> Bug #3053 (Resolved): Multiple Documentation windows not possiblehttps://projects.ecoinformatics.org/ecoinfo/issues/30532008-01-08T20:39:37ZDan Higginshiggins@nceas.ucsb.edu
<p>Only a single documentation window can appear at a time and it remains the first one opened.</p> Bug #2920 (Resolved): Problem adding context menus in Keplerhttps://projects.ecoinformatics.org/ecoinfo/issues/29202007-08-30T20:08:20ZDan Higginshiggins@nceas.ucsb.edu
<p>Context menus in Kepler are supposedly added using the uiContextMenuMappings_en_US.properties file. However, I find the attempts to enable the "Listen to Actor' manu fail for an unknown reason. According to the file, one should be able to reuse PTII context menu with an expression like</p>
<p>ACTOR->Listen\ to\ Actor=ACTOR->Listen\ to\ Actor</p>
<p>since Ptolemy has a 'Listen to Actor' context menu.</p>
<p>However, this does not work! (although the method does apparently work in other cases and using other expressions to the right of the '=' sign work)</p> Bug #2490 (Resolved): Get ecogrid endpoints from Ecogrid registryhttps://projects.ecoinformatics.org/ecoinfo/issues/24902006-07-17T18:08:57ZDan Higginshiggins@nceas.ucsb.edu
<p>Currently, individual endpoints for SRB, metacat, GEON, and Digir ecogrid implementations are stored in the KEPLER/lib/config.xml file that ships with Kepler. Unfortunately, these endpoint may change. We need to update Kepler to retreive these from the Ecogrid registry (at startup?)so that they can change and just send new values to the registry (Otherwise, distributed versions of Kepler will break when endpoints are changed!)</p>