Kepler: Issueshttps://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362015-08-25T22:56:03ZEcoinformatics Redmine
Redmine Bug #6834 (Resolved): kepler data can icon displayed incorrectlyhttps://projects.ecoinformatics.org/ecoinfo/issues/68342015-08-25T22:56:03ZDaniel Crawldanielcrawl@gmail.com
<p>The "data can" icon used by DataTurbine and several other Kepler actors is displayed incorrectly. This appears to have been started with Ptolemy r73168 (r73163-73167 do not compile).</p> Feature #6833 (Resolved): syntax highlighting for language actorshttps://projects.ecoinformatics.org/ecoinfo/issues/68332015-08-23T21:35:26ZDaniel Crawldanielcrawl@gmail.com
<p>It would be nice if the Kepler language actors had syntax highlighting. Attached is an updated TextEditorConfigureFactory.</p> Bug #6831 (Closed): saving/loading window properties for multiple graphs/models in BasicGraphFramehttps://projects.ecoinformatics.org/ecoinfo/issues/68312015-08-16T22:50:16ZDaniel Crawldanielcrawl@gmail.com
<p>BasicGraphFrame saves properties such as center, zoom, size, etc., for the open frame. However, it assumes the frame only contains a single JGraph and model. Attached is an updated BasicGraphFrame that allows derived classes to save/load window properties for multiple JGraphs and models.</p> Bug #6829 (Closed): ant change-to fails under Windows Server 2012 R2 with Cygwinhttps://projects.ecoinformatics.org/ecoinfo/issues/68292015-08-12T23:39:08ZChristopher Brookscxh@eecs.berkeley.edu
<p>Under Windows Server 2012 R2 with Cygwin, I ran<br /><pre>
mkdir kepler.modules
cd kepler.modules
svn co https://code.kepler-project.org/code/kepler/trunk/modules/build-area
cd build-area
</pre></p>
<p>and then ant change-to failed:</p>
<pre>
$ ant change-to -Dsuite=kepler
Buildfile: C:\Users\cxh\src\kepler.modules\build-area\build.xml
change-to:
[change-to] Copying 1 file to C:\Users\cxh\src\kepler.modules\build-area
[change-to] Retrieving modules....
[change-to]
[change-to] kepler:
[change-to] Downloading (if necessary) kepler...
[change-to] svn co -r head https://code.kepler-project.org/code/kepler/trunk/modules/kepler C:\Users\cxh\src\kep\
ler.modules\kepler
[change-to] svn: E000002: Can't make directory '/cygdrive/c/Users/cxh/src/kepler.modules/build-area/C:\Users\cxh\
\src\kepler.modules\kepler': No such file or directory
[change-to]
BUILD FAILED
C:\Users\cxh\src\kepler.modules\build-area\build.xml:104: ERROR: It appears that the command did not execute pro\
perly and exited with an exit code of: 1
Total time: 1 second
cxh@AMPERE ~/src/kepler.modules/build-area
$
</pre>
<p>I can give out accounts on ampere.eecs.berkele.edu if necessary.</p> Bug #6577 (Resolved): infinite loop resolving port widthhttps://projects.ecoinformatics.org/ecoinfo/issues/65772014-07-09T23:06:53ZDaniel Crawldanielcrawl@gmail.com
<p>There are several actors whose output port is set to multiport. When this port is connected to a multiport input port, an error occurs when the workflow executes saying that the default port width could not be determined. The error message says that one way to fix this is call setDefaultPortWidth(1). This works if the output port is connected to only one port, but if the output port is connected to more ports, an infinite loop occurs during preinitialize(). I'm attaching an example workflow.</p> Bug #6371 (Resolved): Documentation: missing content in section 1.1.1 Featureshttps://projects.ecoinformatics.org/ecoinfo/issues/63712014-01-13T18:00:39Zben leinfelderleinfelder@nceas.ucsb.edu
<p>From the NCEAS help system:<br />-----------------<br />In the User's Manual, on page 11, just above the title 1.1.2 Architecture, the sentence ends in "...using a Seman" that's an odd end, and I suspect part of a sentence disappeared. Could you please verify and correct if necessary? Thanks in advance, Koen</p> Bug #5894 (Closed): Clone problems in NamedObjIdhttps://projects.ecoinformatics.org/ecoinfo/issues/58942013-03-19T19:07:23ZChristopher Brookscxh@eecs.berkeley.edu
<p>Checking the configuration results in messages about clone problems in NamedObjId:</p>
<p>The valueListeners java.util.Vector field<br /> in the clone of "org.kepler.moml.NamedObjId" <br /> does not point to an object distinct from the master. <br /> This may cause problems with actor oriented classes.<br /> The clone(Workspace) method should have a line like:<br /> newObject.valueListeners = (Vector)newObject<br /> /* Get the object method or null? <strong>/ valueListeners;<br />The _id org.kepler.objectmanager.lsid.KeplerLSID field<br /> in the clone of "org.kepler.moml.NamedObjId" <br /> does not point to an object distinct from the master. <br /> This may cause problems with actor oriented classes.<br /> The clone(Workspace) method should have a line like:<br /> newObject._id = (KeplerLSID)newObject<br /> /</strong> Get the object method or null? */ _id;</p>
<p>To replicate:<br />1) Start Kepler<br />2) Click on the Documentation link<br />3) Click on "Background information about Ptolemy" <br />4) Click on the Copyright link<br />5) Click on the Copyright link at the bottom (Other copyrights ...)<br />6) Click on "other" information about this configuration at the bottom<br />7) Click on "about:configuration"</p>
<p>The text above will appear.</p>
<p>The issue with cloning could be causing problems with actor oriented classes.</p>
<p>This class should have a clone(Workspace) method added.</p> Bug #5893 (Closed): During installation, Kepler takes a long time to start up under Windowshttps://projects.ecoinformatics.org/ecoinfo/issues/58932013-03-19T14:51:33ZChristopher Brookscxh@eecs.berkeley.edu
<p>With Kepler-2.4RC3 under Windows2008R2 64-bit, the user is asked if they want to start up Kepler. I chose "yes" and nothing happened, so I completed the installation.</p>
<p>Then, I started up Kepler from the menu and it took a long time (over a minute?) to start up.</p>
<p>Then, it seemed like there were two Kepler instances?</p>
<p>It seems like Kepler took a long time to start, which is why when Kepler was starting during the installation, it seemed like nothing was happening.</p> Bug #5722 (Resolved): Check for problems with sanitized RecordToken labelshttps://projects.ecoinformatics.org/ecoinfo/issues/57222012-10-02T01:33:32ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>Filing a bug so this doesn't get forgotten - I said I'd try to look into this ptII change, r64639:<br />-------<br />Sanitize RecordToken or OrderedRecordToken labels, which means that characters like spaces will be converted to underscores. This is necessary so that the string representations of RecordTokens can be reparsed by the expression language. The alternative of modifying the expression language to allow strings as labels causes conflicts in the parser.<br />-------</p>
<p>I worry this change is going to cause problems...anything that expects (e.g. checks equivalence) the data in a label to come out of a RecordToken as it went in will seemingly have a problem. It also sounds like a lossy translation.</p> Feature #5720 (Resolved): Kepler component documentation layout needs improvementhttps://projects.ecoinformatics.org/ecoinfo/issues/57202012-10-01T21:12:51ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>In-Kepler Actor documentation can be pretty frustrating to read due to GUI layout. Generally, for an actor that's been documented, the bulk of the doc information is the explanation of the actor, yet this section of the window isn't given much more space than the others. You cannot adjust individual pane/area sizes, and when you resize the entire actor doc window vertically, all the new space is given to the title pane/area, which is pointless.</p> Bug #5716 (Resolved): Module Manager should only print Downloading messages when actually downloa...https://projects.ecoinformatics.org/ecoinfo/issues/57162012-09-19T23:17:35ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>When switching to a suite using the MM, don't print Downloading messages when downloads don't occur because the user already has the zips. See r30713 and initial comment of bug#5489</p> Bug #5669 (Resolved): replace ProjectLocator.findKeplerModulesDir() with something more robust.https://projects.ecoinformatics.org/ecoinfo/issues/56692012-08-09T19:38:31ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>This method is problematic. Bug#5458 also mentions it.</p>
<pre><code>/**
*
* FIXME replace this with something(s) more robust. Be careful when doing so, some things probably always want
* KeplerData/kepler.modules, others always the other "application modules dir", others one or the other depending on
* what exists.
*
* On linux(at least) during ant run, MemoryProperties invokes this, and the search begins based on the location of ant.jar
* i.e. /usr/share/ant/lib/ant.jar/build-area/modules.txt can be the first attempt.
*
* find the project dir
* WARNING this can return either the application modules dir,
* or KeplerData/kepler.modules, or a false positive (e.g. some arbitrary parent dir that happens to contain build-area/modules.txt),
* or the system-dependent default directory (in the catch).
* @return<br /> */<br /> private static KeplerModulesDir findKeplerModulesDir()</code></pre> Bug #5668 (Resolved): module manager should support batch mode execution.https://projects.ecoinformatics.org/ecoinfo/issues/56682012-08-07T23:19:03Zjianwu jianwujianwu@sdsc.edu
<p>a blocker for batch execution support for Kepler module manager. Users should be able to use command line to check workflow module dependency and update Kepler.</p> Bug #5490 (Resolved): update splash screen version without changing imagehttps://projects.ecoinformatics.org/ecoinfo/issues/54902011-09-09T08:37:53ZMatt Jonesjones@nceas.ucsb.edu
<p>Currently the SplashWindow displays an image with a hardcoded version number on it. This makes building an installer hard. Instead, put the version number in a configuration file, and draw the version text over the top of the base image. In this way the image itself will not need to change from version to version.</p> Bug #4516 (Resolved): Module Manager needs ability to install modules needed by KARshttps://projects.ecoinformatics.org/ecoinfo/issues/45162009-10-29T19:15:35ZChad Berkleyberkley@nceas.ucsb.edu
<p>The roadmap specifies that the module manager should be able to automatically install modules needed by a specific KAR file.</p>
<p>To close this bug, demonstrate that the module manager can automatically install a module needed by a kar file at runtime.</p>