Kepler: Issueshttps://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362012-08-17T23:39:07ZEcoinformatics Redmine
Redmine Bug #5686 (New): datasets produced by archiveDataturbineDataToMetacat workflow show samples 'slid...https://projects.ecoinformatics.org/ecoinfo/issues/56862012-08-17T23:39:07ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>Data sample times slowly increase, e.g. second by second, over time, instead of staying on expected markers. This makes for irregular, messy datasets. I would guess the problem lies with SPAN.</p>
<p>A dataset available here shows examples of this:<br /><a class="external" href="http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&sessionid=&docid=doc.1345243176506661893.1&displaymodule=entity&entitytype=dataTable&entityindex=1">http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&sessionid=&docid=doc.1345243176506661893.1&displaymodule=entity&entitytype=dataTable&entityindex=1</a></p>
<p>Some example problematic changes found within:</p>
<p>timestamps data<br />2012-08-16 00:10:09 13.302116394<br />2012-08-16 00:10:39 13.302242279<br />[SNIP]<br />2012-08-16 02:46:09 13.295635223<br />2012-08-16 02:46:39 13.295513153<br />2012-08-16 02:47:10 13.295863152 # <== slip<br />2012-08-16 02:47:40 13.296142578<br />[SNIP]<br />2012-08-16 08:09:10 13.290791512<br />2012-08-16 08:09:40 13.290988922<br />2012-08-16 08:10:11 13.290698051 # <== slip<br />2012-08-16 08:10:41 13.290913582<br />...</p> Bug #5685 (New): data isn't always chunked properlyhttps://projects.ecoinformatics.org/ecoinfo/issues/56852012-08-17T23:29:49ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>Jing ran the workflow in Windows XP today, and it produced at least one datapackage with data from different sampling rates. See:<br /><a class="external" href="http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&sessionid=&docid=doc.1345243176506661893.1&displaymodule=entity&entitytype=dataTable&entityindex=1">http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&sessionid=&docid=doc.1345243176506661893.1&displaymodule=entity&entitytype=dataTable&entityindex=1</a></p>
<p>Example change section from data from above link:</p>
<p>2012-08-16 22:18:14 13.28463459<br />2012-08-16 22:18:44 13.284519196<br />2012-08-16 22:19:14 13.284427643<br />2012-08-16 22:19:44 13.284352303<br />2012-08-16 22:20:19 13.284294128<br />2012-08-16 22:38:14 13.28584671<br />2012-08-16 22:38:15 13.28584671<br />2012-08-16 22:38:16 13.291329384</p>
<p>These were the results Jing got from the workflow for this particular sensor:</p>
<p>Sensor Name: gpp-data/CR800_Batt_Volt<br />Document URL: <a class="external" href="http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&docid=doc.1345243176506661893.1">http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&docid=doc.1345243176506661893.1</a><br />Time Range: 2012-08-16 00:10:09 ~ 2012-08-16 22:38:32<br />Number of Records: 2680<br />Sensor Name: gpp-data/CR800_Batt_Volt<br />Document URL: <a class="external" href="http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&docid=doc.1345243308947314582.1">http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&docid=doc.1345243308947314582.1</a><br />Time Range: 2012-08-16 22:38:34 ~ 2012-08-16 22:39:54<br />Number of Records: 75<br />Sensor Name: gpp-data/CR800_Batt_Volt<br />Document URL: <a class="external" href="http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&docid=doc.1345243447776683166.1">http://dev2.nceas.ucsb.edu/knb/metacat?action=read&qformat=default&docid=doc.1345243447776683166.1</a><br />Time Range: 2012-08-16 22:39:55 ~ 2012-08-17 22:37:21<br />Number of Records: 8186</p> Bug #5684 (Resolved): Add warning to archiving workflow that it must be run on one machine to not...https://projects.ecoinformatics.org/ecoinfo/issues/56842012-08-17T23:23:20ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>See <a class="external" href="http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5401">http://bugzilla.ecoinformatics.org/show_bug.cgi?id=5401</a></p> Bug #5681 (Resolved): Tracking bug for sensor-view-0.9.0 release testinghttps://projects.ecoinformatics.org/ecoinfo/issues/56812012-08-16T21:36:47ZDerik Barseghianbarseghian@nceas.ucsb.edu
I've already gone through a few rounds of testing on Mac 10.8 and Win7.<br />During the last round Jianwu, Dan, and Jing did some testing on linux. <br />Today I cut a new sensor-view-0.9.0 to fix workflow issues. In this current round I've done the usual sensor-view testing, and run all sensor-view and demo workflows successfully except:
<ul>
<li>Matlab workflows (Matlab's giving me license errors under 10.8: <a class="external" href="http://www.mathworks.com/support/solutions/en/data/1-17RCK/index.html?s_cid=pl_LME9_r2012a">http://www.mathworks.com/support/solutions/en/data/1-17RCK/index.html?s_cid=pl_LME9_r2012a</a>)</li>
<li>the web service and REST demos, which use a webservice that is 'temporarily' down.</li>
<li>those in the 'unsupported' dir.</li>
</ul>
<p>I'm going to test on Win7 and Ubuntu 10.04, and hope to release as is soon.</p>
<p>The last thing I think that needs doing is, if we don't want people working off trunk for these webapps, for Jing to tag a 'release' of the workflow runengine and scheduler, and update any docs to refer to those tags.</p> Bug #5679 (In Progress): the workflows in sensor-view should be resaved beneath sensor-view-0.9.0...https://projects.ecoinformatics.org/ecoinfo/issues/56792012-08-16T01:28:36ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>Now that sensor-view-0.9.0's suite list is finalized, the sensor-view demo workflows should be saved beneath it instead of trunk. Verify dataturbine addresses used therein.</p>
<p>Move the archive workflow into demos too. Check if any documentation refers to its current path.</p> Bug #5678 (New): growingDegreeDays workflow at kepler repository has type resolve errorhttps://projects.ecoinformatics.org/ecoinfo/issues/56782012-08-15T23:27:54Zjianwu jianwujianwu@sdsc.edu
<p>After talking to Derik, reconfiguring the DT actor to use nibbler.nceas.ucsb.edu works for me. Derik said maybe more workflows in kepler repository need to be updated.</p> Bug #5675 (New): new ProgressMeter demo workflows give errors when opening in sensor-view-0.9.0https://projects.ecoinformatics.org/ecoinfo/issues/56752012-08-11T02:03:33ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>There are a few errors when opening these xml workflows beneath sensor-view-0.9.0, despite working in trunk, e.g.:</p>
<p>ptolemy.kernel.util.NameDuplicationException: Attempt to insert object named "init" into a container that already contains an object with that name.</p>
<p>Even though the workflow only contains one "init" PortParameter.</p>
<p>After a kepler restart, I was able to save a copy of this workflow from beneath sensor-view-0.9.0, and can then re-open this copy without error.</p>
<p>I don't know the cause. Maybe these momls will have to be resaved using sensor-view-0.9.0, and the outreach test-patch release recreated.</p> Bug #5632 (New): Runtimemonitor token count idicator placement needs improvementhttps://projects.ecoinformatics.org/ecoinfo/issues/56322012-06-22T20:41:13ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>In the add-on runtimemonitor suite, if for some workflow you instantie a MonitorManager, configure it to Add counters for input and output ports, the input token counter on actors like the String Constant (which adjust their display size dynamically based on how much input there is) will not be to the left of the actor's input port as they should be, but instead over the actor.</p> Bug #5210 (New): Focus stolen from user trying to drag components around during executionhttps://projects.ecoinformatics.org/ecoinfo/issues/52102010-10-19T20:42:35ZDerik Barseghianbarseghian@nceas.ucsb.edu
<p>When trying to drag around a component during a sensor site workflow execution, focus on the component is lost. This makes it nearly impossible to rearrange a workflow with sensors with high sampling rates.</p>
<p>Maybe this is related to how sensor actors update in the gui to show their last data points.</p> Bug #5171 (New): link workflow in components tree to workflow in scheduler viewhttps://projects.ecoinformatics.org/ecoinfo/issues/51712010-09-03T19:54:15ZDaniel Crawldanielcrawl@gmail.com
<p>Once a workflow has been uploaded to a repository, a user might want to schedule it for execution. To make this process easier, it'd be nice if the user could quickly navigate from the workflow entry in the components tree to the workflow entry in the scheduler view (see Figure 7). One way to do this is add a context menu entry for the workflow in the components tree that changed views and automatically selected the same workflow.</p>
<p>It would also be nice to have a link in the reverse direction: scheduler view -> workflow editor / site layout.</p> Bug #5116 (In Progress): add lat/lon to sensor metadata and use during importhttps://projects.ecoinformatics.org/ecoinfo/issues/51162010-08-02T23:19:25ZDaniel Crawldanielcrawl@gmail.com
<p>The site layout in engineering workflows can reflect the physical layout of sensors at a deployment site. If lat/lon metadata were stored on the sensor server, this location information could be used when importing a workflow into Kepler.</p>
<p>The tasks for this bug are:</p>
<p>1. see if SPAN allows lat/lon metadata per sensor<br />2. if not, try to add it<br />3. use lat/lon metadata during import</p> Bug #4773 (New): Data processing on the GPPhttps://projects.ecoinformatics.org/ecoinfo/issues/47732010-02-08T23:51:25ZIlkay Altintasaltintas@sdsc.edu
<p>Do we allow data processing on the GPP unit? Could it be a Kepler workflow, e.g., for quick QA?QC.</p> Bug #4750 (New): create wiring table guihttps://projects.ecoinformatics.org/ecoinfo/issues/47502010-02-05T18:34:25ZDaniel Crawldanielcrawl@gmail.com
<p>Create a wiring table interface that can describe all the connections between sensors and datalogger(s) at a sensor deployment. Note that this table is for documentation purposes only.</p>
<p>See figure 3 in <a class="external" href="https://kepler-project.org/developers/incubation/kepler-engineering-view-for-reap/engineering-view-plans">https://kepler-project.org/developers/incubation/kepler-engineering-view-for-reap/engineering-view-plans</a></p> Bug #4747 (New): import & export site layout to SensorMLhttps://projects.ecoinformatics.org/ecoinfo/issues/47472010-02-05T18:30:11ZDaniel Crawldanielcrawl@gmail.com
<p>Import & export engineering view site to SensorML.</p> Bug #4741 (New): create icons for engineering view componentshttps://projects.ecoinformatics.org/ecoinfo/issues/47412010-02-05T18:18:45ZDaniel Crawldanielcrawl@gmail.com
<p>Create icons for engineering view components in Kepler. This includes: sensor, datalogger, dataturbine, etc. Also, need to have different colors of the icons to show status: green, red, yellow.</p>
<p>See figures 1 and 4 in <a class="external" href="https://kepler-project.org/developers/incubation/kepler-engineering-view-for-reap/engineering-view-plans">https://kepler-project.org/developers/incubation/kepler-engineering-view-for-reap/engineering-view-plans</a></p>