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metacat / src @ 8504

# Date Author Comment
8504 01/15/2014 05:33 PM Jing Tao

Add a note to the administrator to tell the name format of groups and users.

8501 01/14/2014 06:06 PM Jing Tao

Use the verity=>none for start_tls method on some search methods.
These methods will search the referral servers, some of which is using self-signed certificate. There is a difficuty to verify it.
The search methods don't have any critical data, so the down-grade doesn't have too much impact.

8495 01/14/2014 12:49 PM ben leinfelder

fix typos/compilation

8493 01/13/2014 01:41 PM Jing Tao

Change to use AuthFile constructor.

8492 01/13/2014 01:39 PM Jing Tao

Add code to check if groups is null.

8491 01/12/2014 04:48 PM Peter Slaughter

Sync access policy between mn -> cn in case where metacat native ui being used to update ap on mn

8490 01/10/2014 03:06 PM Jing Tao

Change the base directory location.

8489 01/10/2014 02:35 PM Jing Tao

Consolidate the user/group utitlities code.

8488 01/10/2014 10:50 AM Jing Tao

Change the element name in the user from "group" to "memberof".
Fixed a bug that in groupadd.

8487 01/09/2014 10:31 PM Jing Tao

Add methods to handle modify user's attributes.

8486 01/09/2014 09:16 PM Jing Tao

Complete the method - handleUseradd.

8485 01/09/2014 06:25 PM Jing Tao

Add code to handle useradd command.

8484 01/09/2014 04:39 PM Jing Tao

Fixed a bug that showing illegal options in the groupadd command.

8483 01/09/2014 04:34 PM Jing Tao

Add a double quotes at $@. This will make the any argument in the double quotes as one argument.

8482 01/09/2014 04:18 PM Jing Tao

Pass all arguments to the java class.

8481 01/09/2014 04:17 PM Jing Tao

Add a main method which will be used in the command line users management tool.

8480 01/09/2014 12:11 PM Jing Tao

Add a script to help administor to manage usrs/groups.

8478 01/09/2014 09:15 AM Jing Tao

Add the code to handle the organization name.

8476 01/08/2014 05:17 PM Jing Tao

Add the getUserInfo method.

8475 01/08/2014 04:33 PM Jing Tao

Add the common name, organization name and email into the getprincipal method.

8474 01/08/2014 04:32 PM Jing Tao

Add some contants.

8473 01/08/2014 04:04 PM Jing Tao

Add the description in the getGroups methods.

8471 01/08/2014 02:58 PM Jing Tao

Add the common name and email address information into the getUsers method.

8469 01/08/2014 11:06 AM Jing Tao

Fixed a bug that the method addUser didn't set password.

8465 01/07/2014 05:03 PM Jing Tao

Change the code to use BCryptHash to protect password.

8464 01/07/2014 01:56 PM ben leinfelder

Unify solr indexing with an IndexTask that is added to the queue -- allows us to send more than just the systemMetadata to the indexer. Initially this is for READ event counts for each document. https://projects.ecoinformatics.org/ecoinfo/issues/6346

8463 01/06/2014 02:57 PM Jing Tao

Add code to get user info and group info for an alias.

8461 12/24/2013 01:48 PM Jing Tao

Add the code to handle the login action if it is an alias.

8460 12/23/2013 01:29 PM Jing Tao

Add the methods to get the aliased dn through non-tls or tls.

8459 12/20/2013 05:03 PM Jing Tao

Add a method to get the aliasedDn.

8454 12/20/2013 07:46 AM Chris Jones

On changes to system metadata in CNodeService and DocumentImpl, increment the serialVersion.

8452 12/19/2013 04:15 PM Peter Slaughter

(task #6297): sync pid(s) access policy between member node and coordinating node

8450 12/19/2013 02:35 PM Chris Jones

Change CNodeService's archive() and delete() methods to only update Member Nodes in the replica list (not CNs!), since calling CN.archive() again would cause an infinite loop. Thanks for catching this Ben.

8444 12/19/2013 09:35 AM Chris Jones

Update CNodeService.delete() and .archive() to handle situations where the pid is of formatType DATA, and therefore are not registered in the identifier table, and caused NotFound exceptions. For DATA objects, we just update the system metadata now, and for all other objects (METADATA, RESOURCE), we continue to use super.{delete()|archive()}. Also, log the delete/archive into the event log....

8440 12/19/2013 08:53 AM ben leinfelder

prep for 2.3.1 release

8439 12/19/2013 08:13 AM Chris Jones

Remove the broadcastSystemMetadataChange() method since it was a duplicate of notifyReplicaNodes(). Consolidated now.

8438 12/17/2013 05:22 PM Jing Tao

Add some log information.

8437 12/17/2013 09:42 AM Lauren Walker

retrieve the given file names (entityName) of the data files from the EML and use those for our file names in the BagIt content.

8436 12/13/2013 03:42 PM Lauren Walker

Change the BagIt file names to the pid+resource type. Create new Files instead of createTempFile to avoid the randomly generated numbers in the name.

8434 12/12/2013 04:43 PM Jing Tao

Add a description element for the group.

8433 12/12/2013 01:49 PM Jing Tao

Change the user id from the name to the uid.

8431 12/11/2013 04:34 PM Jing Tao

Add the method to get the principals.

8429 12/11/2013 11:44 AM Jing Tao

Add the methods about reset and change password.

8427 12/10/2013 04:12 PM Jing Tao

Add method to get groups and users.

8426 12/10/2013 01:32 PM Jing Tao

Read the password from property file.

8424 12/10/2013 12:53 PM Jing Tao

Encrypt the password.

8421 12/09/2013 10:39 AM Jing Tao

Fixed an issue to check if an account exists.

8419 12/06/2013 05:57 PM Jing Tao

Add a file based authentication mechanism.

8415 12/02/2013 05:26 PM Jing Tao

when a user reset the password, we search the user to use the base=o=org,dc=ecoinformatics,dc=org and filter is uid=username.

8414 11/25/2013 01:40 PM Jing Tao

Add the code to set the replication status when some exceptions happen.

8413 11/22/2013 04:01 PM Jing Tao

Add the code to check if the stored the uidnext is a number or not.

8412 11/21/2013 07:29 PM Jing Tao

Fixed a bug that a debug message is incorrect.

8411 11/21/2013 12:27 PM Jing Tao

Add the missed the attriubtes such as uidNumber, gidNumber and et al.

8410 11/21/2013 09:55 AM Jing Tao

Get the some properties from the metacat.properties file.

8408 11/20/2013 05:29 PM Jing Tao

Add a new method to get the next avaliable uid.

8403 11/18/2013 03:10 PM Jing Tao

When start tls, the verify was changed to "require" rather than "none".

8393 11/13/2013 06:45 AM ben leinfelder

add indices for access log performance during upgrade to 2.3.0.

8369 11/05/2013 04:27 PM ben leinfelder

always return the metacat logout form when calling the perl registry logout action, even when there is no perl session to invalidate -- needed for metacatui.

8366 11/05/2013 03:27 PM ben leinfelder

include update statement for marking newer revisions

8362 11/04/2013 01:56 PM ben leinfelder

generate ORE object when publishing even if there was not an ORE for the original package. https://projects.ecoinformatics.org/ecoinfo/issues/6194

8361 11/01/2013 08:22 AM ben leinfelder

set registry permissions when configuring the exploded war on *nix systems. https://projects.ecoinformatics.org/ecoinfo/issues/4690

8360 10/31/2013 01:07 PM Jing Tao

Add the methond named isAuthoritativeMNodeAdmin method. It applies to both CN and MN methods.

8357 10/31/2013 09:31 AM ben leinfelder

actually remove the entry if it is expired (uncomment the function call). https://projects.ecoinformatics.org/ecoinfo/issues/6099

8356 10/31/2013 08:02 AM ben leinfelder

correct the createTimestamp filter and search base -- only remove inetOrgPerson entries, not any underlying structure that was added to store these temporary accounts. https://projects.ecoinformatics.org/ecoinfo/issues/6099

8355 10/30/2013 03:37 PM Chris Jones

On calls to archive(), log the correct call (not delete()).

8354 10/30/2013 12:23 PM ben leinfelder

correct some syntax errors, date filter formatting. https://projects.ecoinformatics.org/ecoinfo/issues/6099

8351 10/30/2013 10:16 AM ben leinfelder

clear temporary accounts that have not been activated after a configurable number of hours. https://projects.ecoinformatics.org/ecoinfo/issues/6099

8350 10/30/2013 08:47 AM ben leinfelder

change method name from copy and paste.

8348 10/29/2013 03:48 PM ben leinfelder

do not include default organization for the metacatui "skin"

8339 10/21/2013 01:56 PM ben leinfelder

use 2.3.0 for this next release of metacat.

8336 10/21/2013 12:44 PM ben leinfelder

make sure all versions are using 2.2.2 of some sort -- thinking of making this release a 2.3.0 release because we will be branching/tagging from the trunk, not the 2.2.x branch.

8335 10/18/2013 12:16 PM ben leinfelder

add 2 indexes to speed up dataONE log retrieval. https://projects.ecoinformatics.org/ecoinfo/issues/6161

8327 10/16/2013 05:19 PM Jing Tao

Fixed a bug that the configuration page shows complete even though the DataONE configuration hadn't done yet.

8326 10/16/2013 05:18 PM Jing Tao

Add a util class for dataone configuration.

8323 10/16/2013 04:29 PM Jing Tao

Add code the display the SchemaModification exception.

8321 10/15/2013 08:46 PM Jing Tao

Fixed a catch clause syntax which is only compatible with java 1.7.

8320 10/15/2013 03:39 PM Jing Tao

Add code the overwrite the schema.xml in the solr-home/conf.

8319 10/15/2013 03:37 PM Jing Tao

Add two scripts to update the db to 2.2.2

8314 10/14/2013 03:22 PM Jing Tao

Fixed a bug that the group information couldn't be retrived from the session.

8313 10/11/2013 04:35 PM Lauren Walker

Change the guid.ezid.uritemplate.metadata property value to the hostname only, with no context

8307 10/10/2013 01:01 PM ben leinfelder

prep project for 2.2.1 patch release -- will also merge to the 2.2.x branch.

8306 10/10/2013 12:27 PM ben leinfelder

correctly configure metacat-index to use metacat context/deployment location. https://projects.ecoinformatics.org/ecoinfo/issues/6138

8304 10/09/2013 11:52 PM Matt Jones

Reviewed code for all uses of FileInputStream, checking to see if the method should be closing the stream, and if so, closing it in the method as well as in the finally clause to ensure we don't leak file descriptors.

8303 10/09/2013 08:53 PM Jing Tao

Sparate the action reindex and reindexall.

8301 10/09/2013 02:42 PM Matt Jones

Closing some more streams that were left open. This Bug #6136 seems to be pervasive and is going to require an extensive audit to find all of the places where streams are not closed properly.

8300 10/09/2013 01:52 PM Matt Jones

Adding build files to ignore.

8299 10/09/2013 01:47 PM Matt Jones

Refactor to use IOUtils.closeQuietly() which handles nulls and streams that are already closed.

8298 10/09/2013 01:26 PM Matt Jones

Added close() to finally block for readFromFileSystem() call.

8297 10/09/2013 12:44 PM Matt Jones

Closing FileOutputStream handles so that the OS limits on filehandles are not exceeded.

8289 10/08/2013 12:04 PM ben leinfelder

add sample SSLCertificateChainFile directive to DataONE section.

8268 09/27/2013 04:44 PM Jing Tao

Add code to delete existing records for a id when we try to add the id to the index_event table.

8267 09/24/2013 04:21 PM ben leinfelder

do not modify existing SystemMetadata on MN.update() if something goes wrong during content insertion. https://projects.ecoinformatics.org/ecoinfo/issues/6101

8265 09/23/2013 03:54 PM ben leinfelder

Refer to metacat.war deployments since those are now the default. https://projects.ecoinformatics.org/ecoinfo/issues/6082

8264 09/23/2013 01:20 PM ben leinfelder

use UTF-8 if request encoding not given. https://projects.ecoinformatics.org/ecoinfo/issues/6100

8262 09/20/2013 04:36 PM Jing Tao

Remove an extra print content type statement.

8261 09/20/2013 03:26 PM Jing Tao

Add a print statment for "content type". Otherwise, the html can't show up.

8259 09/20/2013 02:42 PM ben leinfelder

do not email a specific account reset URL so that the emails can be used in multiple UI contexts. https://projects.ecoinformatics.org/ecoinfo/issues/6066

8258 09/20/2013 01:17 PM Jing Tao

Comment out some extral "contet type".

8254 09/20/2013 12:20 PM ben leinfelder

ensure all emailed links make sense for the UI that initiated them. also format referrals using the same options as the primary accounts (recursive call needed the html parameter). https://projects.ecoinformatics.org/ecoinfo/issues/6066

8253 09/20/2013 11:46 AM ben leinfelder

include optional email.overrideURL property for the account management page to send an email link that will result in a styled response. https://projects.ecoinformatics.org/ecoinfo/issues/6066