Project

General

Profile

Statistics
| Revision:

# Date Author Comment
5725 12/13/2010 04:09 PM ben leinfelder

include annotation ID in the data table display link so that the style sheet can effectively look up the additional semantic annotation for that data entity.

5724 12/13/2010 04:08 PM ben leinfelder

handle references and original attribute names the same when loading annotation measurements for the column

5723 12/13/2010 03:34 PM ben leinfelder

lookup the annotation details for each column in the data table

5722 12/13/2010 03:33 PM ben leinfelder

use span instead of p tag for showing the full uri of the classes

5721 12/13/2010 10:07 AM ben leinfelder

include template for rendering a single attribute

5720 12/10/2010 03:37 PM ben leinfelder

style the results for ajax stats call

5719 12/10/2010 02:12 PM ben leinfelder

include additional parameters added since sbclter modified these stylesheets.
also remove the duplicate param that caused xslt processors to fail (sometimes)

5718 12/10/2010 02:11 PM ben leinfelder

include citation information at top of page

5717 12/10/2010 10:57 AM ben leinfelder

use the data package title in the header rather than just "Data Set Description"

5716 12/10/2010 10:57 AM ben leinfelder

comment out the "in XXX data catalog system"

5713 12/09/2010 03:50 PM ben leinfelder

handle i18n translation elements that are included in eml 2.1.1

5710 12/09/2010 10:04 AM ben leinfelder

include EML 2.1.1 documents in skin (path query search, mostly)

5707 12/08/2010 04:48 PM ben leinfelder

do not use replace() XPath function - it is 2.0 (not in Xalan)

5706 12/08/2010 01:15 PM ben leinfelder

increase height of the iframe classes to accommodate content

5705 12/08/2010 01:14 PM ben leinfelder

catch error when jQuery is not included in the page, but do nothing

5704 12/08/2010 12:44 PM ben leinfelder

include loadStats() method in branding.js to be reused more widely (with qformat parameter)

5703 12/08/2010 11:51 AM ben leinfelder

move jquery and jquery plugins from semtools to common directory - reuse in default skin

5702 12/08/2010 10:18 AM ben leinfelder

add download count for data entities (online distribution)

5701 12/07/2010 04:40 PM ben leinfelder

use simple mode - just read events tallied

5700 12/07/2010 04:29 PM ben leinfelder

make call to load stats when displaying the data package information

5699 12/07/2010 04:28 PM ben leinfelder

include stats for annotation and data package

5698 12/07/2010 04:25 PM ben leinfelder

include jquery and loadStats() method (in search.js)

5697 12/07/2010 04:24 PM ben leinfelder

use contextURL parameter

5696 12/07/2010 03:31 PM ben leinfelder

add stats to semtools

5694 12/07/2010 02:03 PM ben leinfelder

add stylesheet for rendering simple stats for access log

5690 12/06/2010 11:29 AM ben leinfelder

Make resultset more data package centric

5689 12/03/2010 05:08 PM ben leinfelder

select the tree node when exact match is found

5688 12/03/2010 04:24 PM ben leinfelder

check for exact class match when typing into search term - if there is one, then select it as the chosen term

5687 12/02/2010 04:16 PM ben leinfelder

always open the top level node of the tree when it loads

5686 12/02/2010 11:38 AM ben leinfelder

do not show visual indication of "focused" tree - it looks random because it mostly is (at least when refeshing it with the current active domain - the calls are all asynchronous so we don't ever really know which one will be created last and therefore gain the focus)

5685 12/02/2010 11:29 AM ben leinfelder

load search results when page first loads (browsing - no query constraints)

5684 12/02/2010 11:16 AM ben leinfelder

remove special ">>" character from style sheet
use absolute path to the spinner animated gif

5678 12/01/2010 12:07 PM ben leinfelder

include busy spinner when loading search results

5677 12/01/2010 10:29 AM ben leinfelder

using div tags for the search results now (with some tables too)

5676 12/01/2010 10:06 AM ben leinfelder

commit before trying div-only resultset

5675 11/30/2010 05:44 PM ben leinfelder

hide/show search result details for each matched row.

5672 11/30/2010 03:34 PM ben leinfelder

-use a tab for search options
-search results are in their own container now
-jquery ui and semtools css share same corner radius
-removed form-based "link" in resultset xsl

5669 11/30/2010 02:12 PM ben leinfelder

use jquery UI tabs to separate the Measurement criteria from E,C,P

5668 11/29/2010 04:44 PM ben leinfelder

-"Clear" button actually clears the form and refreshes the search results w/o constraints
-active domain check boxes are honored when refreshing active domain after selection is made in a different tree

5667 11/29/2010 03:49 PM ben leinfelder

"remember" selected/opened nodes when active domain is filtered on click. also using separate cookies for each tree so that it can remember it's state on page reload.

5666 11/23/2010 05:02 PM ben leinfelder

refresh the other trees with active domain when selection is made.
TODO: remember last selected node in the tree and open the tree to that node

5665 11/23/2010 04:18 PM ben leinfelder

asynchronously load search results after each tree selection event

5664 11/23/2010 11:54 AM ben leinfelder

add checkbox for active domain pruning on each tree.

5663 11/23/2010 09:34 AM ben leinfelder

prune the search tree - keep parents and children of matched nodes

5662 11/22/2010 06:34 PM ben leinfelder

set the selected concept as the value in the search field

5661 11/22/2010 04:37 PM ben leinfelder

remove bioportal search fields

5660 11/22/2010 04:25 PM ben leinfelder

include scroll bars for the jsTrees

5659 11/19/2010 04:42 PM ben leinfelder

no more aqua for search results

5658 11/19/2010 04:06 PM ben leinfelder

add search box for finding an entry in the tree

5656 11/19/2010 03:06 PM ben leinfelder

include jsTree for navigating the ontology hierarchy when making class selections for the search

5635 11/09/2010 02:47 PM ben leinfelder

comment out debugging alert

5634 11/09/2010 02:27 PM ben leinfelder

use SERVLET_URL not fred

5633 11/09/2010 12:47 PM ben leinfelder

use jQuery to build active domain selections

5632 11/08/2010 05:25 PM ben leinfelder

starting to filter by active domains. still request-based, but would like to make asynchronous calls when populating the fields.

5618 10/15/2010 10:51 AM ben leinfelder

allow default style to be used for the registry (added login mapping)

5604 10/07/2010 01:33 PM ben leinfelder

look up the active annotation classes

5602 10/07/2010 11:51 AM ben leinfelder

browse/search/madlib hybrid sample

5601 10/06/2010 02:55 PM ben leinfelder

use newer SBC-ish style for the default skin

5600 10/06/2010 11:46 AM ben leinfelder

include css classes for skins (like default and semtools) that use the "subGroup" class

5599 10/06/2010 11:05 AM ben leinfelder

use newer SBC-ish style for the default skin

5598 09/28/2010 03:11 PM ben leinfelder

correctly set the map location based on organizationScope

5597 09/28/2010 03:09 PM ben leinfelder

correctly set the organizationScope from the request value - filters the search results by location

5594 09/23/2010 02:39 PM ben leinfelder

use <p> consistently when providing a tooltip for the full class URI

5593 09/23/2010 02:35 PM ben leinfelder

number of changes:
-list measurements across the screen under their observation
-use title attributes for full ontology class URI, only show full URI for the entity class since there is horizontal room
-make the annotation box more compact and intuitive for both screens (details and search results)

5592 09/23/2010 02:33 PM ben leinfelder

make DP title bold in result set

5591 09/23/2010 01:07 PM ben leinfelder

nest annotation groupings nicely for each obs/meas

5590 09/23/2010 12:40 PM ben leinfelder

include nesting borders

5589 09/23/2010 12:24 PM ben leinfelder

integrate Annotation in resultset better

5588 09/23/2010 12:12 PM ben leinfelder

place annotation information in the same cell as the data package title/id

5587 09/23/2010 11:56 AM ben leinfelder

include content in a wrapper div for margins

5586 09/23/2010 11:54 AM ben leinfelder

comment out debugging alert()

5585 09/23/2010 11:52 AM ben leinfelder

do not make hyperlinks extra bold

5584 09/23/2010 11:51 AM ben leinfelder

reduce white space

5583 09/23/2010 11:51 AM ben leinfelder

include some gray in the paragraphs

5581 09/23/2010 11:37 AM ben leinfelder

use "Myriad..." fonts, then cascade down to Arial, sans... Lifted from BioPortal L+F

5578 09/22/2010 05:00 PM ben leinfelder

only show that an annotation exists in the resultset, not the full details

5576 09/22/2010 11:23 AM ben leinfelder

make the header hyperlinks bold

5575 09/22/2010 11:07 AM ben leinfelder

reduce header font sizes

5574 09/22/2010 10:59 AM ben leinfelder

wrap content in div for margins
add bottom margin on header

5573 09/22/2010 10:58 AM ben leinfelder

include clearer font [size]
add leaf at right

5571 09/22/2010 10:08 AM ben leinfelder

use light grey for backgrounds
dark grey for links

5570 09/22/2010 09:49 AM ben leinfelder

don't use green for links

5569 09/21/2010 04:50 PM ben leinfelder

include new graphic header for semtools skin.
adjust css to fit better

5567 09/21/2010 02:30 PM ben leinfelder

only surround main dataset with border to avoid a weird border artifact when displaying sub-groups of the eml package

5566 09/21/2010 02:29 PM ben leinfelder

include header/footer like in the old JS-based template

5565 09/21/2010 01:08 PM ben leinfelder

do away with the "eml-common.xsl" - it's not really worth it in terms of being able to customize for each skin

5564 09/21/2010 12:51 PM ben leinfelder

use sbclter css

5563 09/21/2010 12:34 PM ben leinfelder

use shared style sheets for rendering eml. this is sbclter/pisco-like

5562 09/21/2010 12:31 PM ben leinfelder

consolidate shared stylesheets - no differences between 2.0.1 and 2.1.0 directories

5561 09/21/2010 12:31 PM ben leinfelder

consolidate shared stylesheets - no differences between 2.0.1 and 2.1.0 directories

5560 09/21/2010 12:29 PM ben leinfelder

consolidate shared stylesheets - no differences between 2.0.1 and 2.1.0 directories

5558 09/21/2010 11:03 AM ben leinfelder

remove duplicate "attributeindex" parameter

5544 09/08/2010 02:32 PM ben leinfelder

removing unused search pages (leftover from 'default' skin copy)

5543 09/07/2010 04:30 PM ben leinfelder

separate the class and the ontology from the the URI for easier reading. putting them in a table also helps

5542 09/07/2010 03:49 PM ben leinfelder

include links from annotation to the data package metadata

5541 09/07/2010 03:06 PM ben leinfelder

include stylesheet to display annotation document on it's own (in addition to within a resultset)

5540 09/07/2010 02:40 PM ben leinfelder

include the column name that the measurement is mapped to

5539 09/07/2010 11:39 AM ben leinfelder

list the currently registered ontologies (in case someone wants to unregister them?)

5538 09/07/2010 10:06 AM ben leinfelder

rearrange the ontology registration page - bioportal-hosted ontologies come first

5537 09/06/2010 04:50 PM ben leinfelder

include dropdown of all bioportal ontologies - you can choose to register or unregister them with metacat for annotation-based searching. perhaps not the most elegant workflow, but better than having to manually collect the URIs and URLs.