Metacat

Added required license files.

Merge cvs branch replication to cvs head.

added mappings for new eml beta6 stylesheets

Change the maximum connection number from 10 to 25.

Add two variables here: one is runDBConnectionRecycleThread. If it set "on", the recycle connection tread will run periodically. The other is cycleTimeOfDBConnection. This is for the recycle periodical time in milli seconds.

Add some variables to control db connection.

Add a variable named junittesturl there.

Change datafilepath's value and it should equals the property value of datafilepath in build.xml.

Add two variables replicationsenddata and replicationacceptdata

Add a variable named debuglevel here. It control the differrent debug level message will be printed.

This jar file can be deleted.

This jar file will install in ant/lib.

In order to implementate junit, this jar file is needed.

In order to test MetacatServlet, we need use HttpMessage class, so add this jar file

Adding a variable "hub". If hub=super, the metacat can replicate the documents and data file which's home host is not itself.

Add a new variable datafileflag. This variable will indicate if a document is a data file in updated documents list in replication.

Add some new format.

changed .highlight style so font-size attribute is 1em instead of -1. Original -1 setting was not NN4 compatible

Change replication and replicationdata to be tokens

Add two variable: replication and replicationdata.
If administrator set replication on, replication will work. Set it off, it stop.
If administrator set both replication and replicationdata on, metacat will replicate both meta data and data. If replication is set on and replciationdata set off, metacat only replicate meta data.

Adding a variable "context " here.

Token for the server is changed to correct one.

Removed obsoleted marine files. See the new "marine" module for
relevant copies of these files.

New stylesheet that is specific to the KNB website.

replaced dev.nceas.ucsb.edu with server in the marine index file

Change every "http://server" in target to "systemidserver". It will look
like that:
<target
publicid="-//W3C//HTML//EN">systemidserver@style-path@/resultset.xsl</target>

fixed my tagging error

some small changes I had to make to get the QAENGINE demo to work right. this should be committing in a branch

In QBQuery class some classes - Triple and TripleCollection, which come from morpho package wereused. So morpho.jar was added to metacat libray. The reseaon to use these class is xml document need to be parsed and get docids' relationship.

Adding the style sheet of html file in zip data package for morpho to metacat.
So the html summary file can have the same style in morpho and metacat zip package.

Adding a new doctype and its publicid="-//NCEAS//eml-generic//EN".
It connects http://server@style-path@/generic-morpho.xsl.
So the html files in zip data package have the same style sheet for both morpho and metacat.

xerces.jar was update to 1.4.4

Added qformat parameter for switching css stylesheets.

Fixed bug in login.xsl that was preventing a successful xslt transform. Now
successful logins redirect correctly, unsuccessful ones redirect to the
login page again.

Added new stylesheets for displaying the eml-attribute and eml-entity modules.

Changed the link urls in the eml-dataset display stylesheet to use the
default style-set as set in the build file rather than hard-coding the
value 'html'. This allows more flexibility in switching styles, for example
when setting up the marine, nrs, and obfs sites.

updated all of the returndoctypes so that emlbeta4 and emlbeta6 will show up in the resultset.

fixed error I introduced when I got postgres working

changed dtd dir

changed the datadir again

changed datadir variable from install-dir to installdir

we no longer need this jar file. all of its functionality was replaced by xalan.

jar files for xalan

fixed typo in web.xml file

updated the web.xml file. took out download servlet and marineservlet.

jar files needed for metacat.

made a ton of changes related to keeping oracle SQL code out of the main classes. fixed a bug where the timing of the index thread was off so when it went to index a document, the document was not already in xml_documents thus breaking the FK relation between xml_documents and xml_index. I think that bug might be the reason for the blank resultset screens in morpho. made the postgres implementation much more robust.

fixed a couple bugs with doctypes that I found while setting up a demo

made it so we can now use multiple accessfilestypes and packagdfiletypes in the metacat.properties file. Also fixed a bug introduced when the 'http://' was removed from behind the server name in the loaddtd.sql script and the knb.xml file

Updated properties to reflect the new EML version.

Added new dtd to style-set config file.

Updated documentation to reflect new installprocess.

Modified build.xml to properly copy the docs into the distribution, which
required some changes in the ant token filtering scheme.

Removed all of the redundant/obsolete copies of eml dtds from the
metacat module. Now one must get the dtds from the mdstandards/eml
module instead. This is doen to ensure that the DTDs installed are up to
date.

Note that I am adding build support into the build.xml file for automatically...

updated for new eml release

Fix for bug #309 so that Metacat will now follow LDAP referrals. Previously
the default was to ignore referrals. Now we explictly set the JNDI
Context.REFERRAL value to the value in the metacat.propert "referral".
The metacat.properties file has been modified to add the "referral" property,...

updated web.xml file for the download servlet

Updated the knb.xml configuration to use the new public IDs associated with
eml beta 4.

fixed access control bug. the character data in the sax parser was not getting trimmed and causing problems. also fixed hard coded eml-dataset public id in the web index file

Added new beta5 version of eml-software dtd, and added to catalog.

added new docid to returndoc for web form

changed package and access file doctype

took out hard coded paths for style dirs

Added new DTD files for the new release of EML. Changed the naming
convention for all new DTDs, so the public IDs are now consistently
versioned.

Updated metacat login semantics. Now, metacat assumes the username passed
in is the 'full' distinguished name of the user. If that fails, then
instead it tries looking up the string and seeing if it can determine
what the DN is, then uses it. The preferred method of logging in via...

New version of the IE5 stylesheet that is XSLT 1.0 compliant.

CHanged style-set handling for case when a stylesheet for a specific
doctype has not been registered. Now we are using a simple "ascii tree"
view of the XML document. I'm hoping we can get a nicer generic display
set up over the long run, but for now this handles the basics.

Removed all DTDs from the metacat module in anticipation of getting
them from the standard "mdstandards/eml" module. This will mean
that an update to the build script is necessary in order to copy and rename
the dtds from the eml module.

default css stylesheet so that metacat will look right

added input box in replMain web page for downloading of the certificate file
from the specified URL of the source server
added new metacat property "certPath" for uploading the certificate file onto destination server

Minor bug fixes following change in style handling. Fixed image locations,
cleaned up main resultset stylesheet.

Added support for multiple user interfaces by enabling style sheet
transformations to be configured from within metacat rather than
from in the database. Now, metacat uses the qformat parameter to determine
a "style set", which is mapped to an xml configuration file that...

More fully completed the eml-dataset XSLT stylesheet for translating
into HTML format. Now more of the relevant fields are completed, and
the coverages are shown. Still need to systematically address every
field that could be present, but I hit the major ones.

Modified metacat stylesheets to now use a "style-path" filter for setting
the path to XSL and CSS style sheets. this allows the style
location to be configured independently of the main web url for metacat
links.

Updated index page to launch proper initial query.

Updated stylesheet to reflect the new eml2 schema.

Revised build.xml and metacat.properties to make it easier to
install alternative stylesheets for metacat. In the process,
replaced the deprecated copydir and copyfile commands in build.xml
with appropriate "copy" commands.

Fixed returndoctype param.

Updated stylesheet to use new package returndoc type for searches
(eml-dataset-2.0).

dtds that have entities removed for morpho/metacat compatibility

changed accessdoctype=-//NCEAS//eml-access-2.0//EN
b' AccessControlList is changed to use eml-access-2.0.dtd already

Modified Metacat to support large data file uploads. This is accomplished
by supporting a new content type for data sent to metacat:
multipart/form-data
which allows multiple files to be sent in a standard MIME format. The
MetacatServlet.handleGetOrPost() method now checks the incoming content...

included new terms for searchmode:
equals (former matches-exactly)
isnot-equal
less-than
greater-than
less-than-equals
greater-than-equals

new property for ldaps:// url for LDAP connection over SSL;
it is set on second port - by default 636;
for plain LDAP communications the default port 389 is used.

changed dbAdapter property to edu...OracleAdapter

Updated pathquery.dtd to reflect new addition of filterdoctype element.

added new property for the dbadapter class as:
dbAdapter=edu.ucsb.nceas.dbadapter.DBOracle
the installation procedure should change it to the appropriate class

Modifications that change the package handling behavior of metacat. Package
membership is now determined by an identifier being used as either the subject
or object in a triple. One can not request arbitrary returndocs -- only
those types that have package information embedded can be "returndoctype"...

specified the correct param list about the "read" action changes

chaged the hidden input box from "relation" to "docid"

stylesheet for download files

interface for viewing only download documents

interface for viewing only download documents

included checkbox "public" for the servlet's "public" parameter
it is checked by default

Modified the license and copyright terms for many of the files. Added
a LICENSE file and a README file in preparation of a distribution.

updated the syntax of some form parameters, put in build strings

put in build strings instead of hard coded paths to servers

changed doctype of package files

added data port param

added property "accessdoctype=-//NCEAS//eml-access//EN"

added support to download a data file through metacat using a metacat url or a docid parameter: added a datafilepath parameter to show the servlet where data files are stored on the local file system.