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/**
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* '$RCSfile$'
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* Copyright: 2000-2011 Regents of the University of California and the
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* National Center for Ecological Analysis and Synthesis
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*
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* '$Author: tao $'
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* '$Date: 2016-11-09 17:26:27 -0800 (Wed, 09 Nov 2016) $'
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*
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* This program is free software; you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation; either version 2 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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*/
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package edu.ucsb.nceas.metacat.dataone.v1;
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import java.io.InputStream;
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import java.math.BigInteger;
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import java.sql.SQLException;
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import java.util.Date;
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import java.util.List;
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import javax.servlet.http.HttpServletRequest;
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import org.apache.commons.io.IOUtils;
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import org.apache.log4j.Logger;
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import org.dataone.service.cn.v1.CNAuthorization;
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import org.dataone.service.cn.v1.CNCore;
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import org.dataone.service.cn.v1.CNRead;
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import org.dataone.service.cn.v1.CNReplication;
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import org.dataone.service.exceptions.BaseException;
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import org.dataone.service.exceptions.IdentifierNotUnique;
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import org.dataone.service.exceptions.InsufficientResources;
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import org.dataone.service.exceptions.InvalidRequest;
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import org.dataone.service.exceptions.InvalidSystemMetadata;
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import org.dataone.service.exceptions.InvalidToken;
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import org.dataone.service.exceptions.NotAuthorized;
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import org.dataone.service.exceptions.NotFound;
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import org.dataone.service.exceptions.NotImplemented;
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import org.dataone.service.exceptions.ServiceFailure;
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import org.dataone.service.exceptions.UnsupportedType;
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import org.dataone.service.exceptions.VersionMismatch;
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import org.dataone.service.types.v1.AccessPolicy;
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import org.dataone.service.types.v1.Checksum;
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import org.dataone.service.types.v1.ChecksumAlgorithmList;
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import org.dataone.service.types.v1.DescribeResponse;
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import org.dataone.service.types.v1.Event;
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import org.dataone.service.types.v1.Identifier;
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import org.dataone.service.types.v1.Log;
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import org.dataone.service.types.v1.NodeList;
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import org.dataone.service.types.v1.NodeReference;
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import org.dataone.service.types.v1.ObjectFormat;
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import org.dataone.service.types.v1.ObjectFormatIdentifier;
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import org.dataone.service.types.v1.ObjectFormatList;
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import org.dataone.service.types.v1.ObjectList;
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import org.dataone.service.types.v1.ObjectLocationList;
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import org.dataone.service.types.v1.Permission;
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import org.dataone.service.types.v1.Replica;
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import org.dataone.service.types.v1.ReplicationPolicy;
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import org.dataone.service.types.v1.ReplicationStatus;
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import org.dataone.service.types.v1.Session;
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import org.dataone.service.types.v1.Subject;
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import org.dataone.service.types.v1.SystemMetadata;
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import org.dataone.service.types.v1_1.QueryEngineDescription;
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import org.dataone.service.types.v1_1.QueryEngineList;
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import org.dataone.service.types.v2.TypeFactory;
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import edu.ucsb.nceas.metacat.IdentifierManager;
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import edu.ucsb.nceas.metacat.dataone.D1NodeVersionChecker;
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import edu.ucsb.nceas.metacat.dataone.convert.LogV2toV1Converter;
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import edu.ucsb.nceas.metacat.properties.PropertyService;
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/**
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* Represents Metacat's implementation of the DataONE Coordinating Node service
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* API. Methods implement the various CN* interfaces, and methods common to both
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* Member Node and Coordinating Node interfaces are found in the D1NodeService
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* super class.
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*
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*/
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public class CNodeService implements CNAuthorization, CNCore, CNRead,
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CNReplication {
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// pass through to the most recent implementation
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private edu.ucsb.nceas.metacat.dataone.CNodeService impl = null;
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/* the logger instance */
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private Logger logMetacat = null;
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/**
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* singleton accessor
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*/
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public static CNodeService getInstance(HttpServletRequest request) {
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return new CNodeService(request);
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}
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/**
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* Constructor, private for singleton access
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*/
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private CNodeService(HttpServletRequest request) {
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logMetacat = Logger.getLogger(CNodeService.class);
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impl = edu.ucsb.nceas.metacat.dataone.CNodeService.getInstance(request);
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}
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@Override
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public boolean deleteReplicationMetadata(Identifier pid,
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NodeReference nodeId, long serialVersion) throws InvalidToken, InvalidRequest,
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ServiceFailure, NotAuthorized, NotFound, NotImplemented,
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VersionMismatch {
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return impl.deleteReplicationMetadata(null, pid, nodeId, serialVersion);
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}
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@Override
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@Deprecated
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public boolean deleteReplicationMetadata(Session session, Identifier pid,
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NodeReference nodeId, long serialVersion) throws InvalidToken, InvalidRequest,
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ServiceFailure, NotAuthorized, NotFound, NotImplemented,
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VersionMismatch {
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return impl.deleteReplicationMetadata(session, pid, nodeId, serialVersion);
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}
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@Override
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public boolean isNodeAuthorized(Subject targetNodeSubject, Identifier pid)
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throws NotImplemented, NotAuthorized, InvalidToken, ServiceFailure,
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NotFound, InvalidRequest {
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return impl.isNodeAuthorized(null, targetNodeSubject, pid);
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}
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@Override
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@Deprecated
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public boolean isNodeAuthorized(Session originatingNodeSession, Subject targetNodeSubject, Identifier pid)
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throws NotImplemented, NotAuthorized, InvalidToken, ServiceFailure,
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NotFound, InvalidRequest {
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return impl.isNodeAuthorized(originatingNodeSession, targetNodeSubject, pid);
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}
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@Override
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public boolean setReplicationPolicy(Identifier pid,
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ReplicationPolicy policy, long serialVersion) throws NotImplemented, NotFound,
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NotAuthorized, ServiceFailure, InvalidRequest, InvalidToken,
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VersionMismatch {
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String serviceFailure = "4882";
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String notFound = "4884";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"No object could be found for given PID: "+pid.getValue());
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return impl.setReplicationPolicy(null, pid, policy, serialVersion);
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}
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@Override
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@Deprecated
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public boolean setReplicationPolicy(Session session, Identifier pid,
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ReplicationPolicy policy, long serialVersion) throws NotImplemented, NotFound,
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NotAuthorized, ServiceFailure, InvalidRequest, InvalidToken,
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VersionMismatch {
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return impl.setReplicationPolicy(session, pid, policy, serialVersion);
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}
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@Override
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public boolean setReplicationStatus(Identifier pid,
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NodeReference targetNode, ReplicationStatus status, BaseException failure)
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throws ServiceFailure, NotImplemented, InvalidToken, NotAuthorized, InvalidRequest, NotFound {
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return impl.setReplicationStatus(null, pid, targetNode, status, failure);
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}
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@Override
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@Deprecated
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public boolean setReplicationStatus(Session session, Identifier pid,
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NodeReference targetNode, ReplicationStatus status, BaseException failure)
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throws ServiceFailure, NotImplemented, InvalidToken, NotAuthorized,
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InvalidRequest, NotFound {
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String serviceFailure = "4700";
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String notFound = "4740";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"No object could be found for given PID: "+pid.getValue());
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return impl.setReplicationStatus(session, pid, targetNode, status, failure);
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}
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@Override
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public boolean updateReplicationMetadata(Identifier pid,
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Replica replica, long serialVersion) throws NotImplemented, NotAuthorized, ServiceFailure,
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NotFound, InvalidRequest, InvalidToken, VersionMismatch {
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return impl.updateReplicationMetadata(null, pid, replica, serialVersion);
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}
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@Override
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@Deprecated
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public boolean updateReplicationMetadata(Session session, Identifier pid,
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Replica replica, long serialVersion) throws NotImplemented, NotAuthorized,
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ServiceFailure, NotFound, InvalidRequest, InvalidToken,
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VersionMismatch {
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return impl.updateReplicationMetadata(session, pid, replica, serialVersion);
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}
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@Override
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public DescribeResponse describe(Identifier pid) throws InvalidToken,
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NotAuthorized, NotImplemented, ServiceFailure, NotFound {
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String serviceFailure = "4931";
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String notFound = "4933";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The system metadata for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"No system metadata could be found for given PID: "+pid.getValue());
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return impl.describe(null, pid);
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}
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@Override
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@Deprecated
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public DescribeResponse describe(Session session, Identifier pid)
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throws InvalidToken, NotAuthorized, NotImplemented, ServiceFailure,
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NotFound {
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String serviceFailure = "4931";
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String notFound = "4933";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The system metadata for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"No system metadata could be found for given PID: "+pid.getValue());
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return impl.describe(session, pid);
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}
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@Override
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public InputStream get(Identifier pid) throws InvalidToken,
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ServiceFailure, NotAuthorized, NotFound, NotImplemented {
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String serviceFailure = "1030";
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String notFound = "1020";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"The object specified by "+pid.getValue()+" does not exist at this node");
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return impl.get(null, pid);
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}
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@Override
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@Deprecated
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public InputStream get(Session session, Identifier pid) throws InvalidToken,
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ServiceFailure, NotAuthorized, NotFound, NotImplemented {
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String serviceFailure = "1030";
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String notFound = "1020";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"The object specified by "+pid.getValue()+" does not exist at this node");
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return impl.get(session, pid);
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}
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@Override
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public Checksum getChecksum(Identifier pid) throws InvalidToken,
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ServiceFailure, NotAuthorized, NotFound, NotImplemented {
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return impl.getChecksum(null, pid);
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}
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@Override
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@Deprecated
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public Checksum getChecksum(Session session, Identifier pid)
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throws InvalidToken, ServiceFailure, NotAuthorized, NotFound,
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NotImplemented {
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return impl.getChecksum(session, pid);
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}
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@Override
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public QueryEngineDescription getQueryEngineDescription(String queryEngine)
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throws InvalidToken, ServiceFailure, NotAuthorized, NotImplemented,
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NotFound {
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return impl.getQueryEngineDescription(null, queryEngine);
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}
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@Override
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public SystemMetadata getSystemMetadata(Identifier pid)
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throws InvalidToken, ServiceFailure, NotAuthorized, NotFound,
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NotImplemented {
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String serviceFailure = "1090";
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String notFound = "1060";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The system metadata for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"No system metadata could be found for given PID: "+pid.getValue());
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org.dataone.service.types.v2.SystemMetadata sysMeta = impl.getSystemMetadata(null, pid);
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SystemMetadata retSysMeta = null;
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try {
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retSysMeta = TypeFactory.convertTypeFromType(sysMeta, SystemMetadata.class);
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} catch (Exception e) {
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// report as service failure
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ServiceFailure sf = new ServiceFailure("1090", e.getMessage());
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sf.initCause(e);
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throw sf;
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}
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return retSysMeta;
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}
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@Override
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@Deprecated
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public SystemMetadata getSystemMetadata(Session session, Identifier pid)
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throws InvalidToken, ServiceFailure, NotAuthorized, NotFound,
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NotImplemented {
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298
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String serviceFailure = "1090";
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String notFound = "1060";
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impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The system metadata for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
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"No system metadata could be found for given PID: "+pid.getValue());
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org.dataone.service.types.v2.SystemMetadata sysMeta = impl.getSystemMetadata(session, pid);
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SystemMetadata retSysMeta = null;
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try {
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retSysMeta = TypeFactory.convertTypeFromType(sysMeta, SystemMetadata.class);
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} catch (Exception e) {
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// report as service failure
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ServiceFailure sf = new ServiceFailure("1090", e.getMessage());
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sf.initCause(e);
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throw sf;
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}
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return retSysMeta;
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}
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314
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315
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@Override
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316
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public ObjectList listObjects(Date startTime, Date endTime,
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ObjectFormatIdentifier formatid, Boolean replicaStatus, Integer start,
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Integer count) throws InvalidRequest, InvalidToken, NotAuthorized,
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319
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NotImplemented, ServiceFailure {
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320
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NodeReference nodeId = null;
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321
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if(!replicaStatus) {
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322
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//not include those objects whose authoritative node is not this mn
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nodeId = new NodeReference();
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try {
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String currentNodeId = PropertyService.getInstance().getProperty("dataone.nodeId"); // return only pids for which this mn
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nodeId.setValue(currentNodeId);
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} catch(Exception e) {
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328
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throw new ServiceFailure("1580", e.getMessage());
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329
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}
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330
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}
|
331
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return impl.listObjects(null, startTime, endTime, formatid, null, nodeId, start, count);
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332
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}
|
333
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|
334
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@Override
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335
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@Deprecated
|
336
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public ObjectList listObjects(Session session, Date startTime, Date endTime,
|
337
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ObjectFormatIdentifier formatid, Boolean replicaStatus, Integer start,
|
338
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Integer count) throws InvalidRequest, InvalidToken, NotAuthorized,
|
339
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NotImplemented, ServiceFailure {
|
340
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NodeReference nodeId = null;
|
341
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if(!replicaStatus) {
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342
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//not include those objects whose authoritative node is not this mn
|
343
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nodeId = new NodeReference();
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344
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try {
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345
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String currentNodeId = PropertyService.getInstance().getProperty("dataone.nodeId"); // return only pids for which this mn
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346
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nodeId.setValue(currentNodeId);
|
347
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} catch(Exception e) {
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348
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throw new ServiceFailure("1580", e.getMessage());
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349
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}
|
350
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}
|
351
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return impl.listObjects(session, startTime, endTime, formatid, null, nodeId, start, count);
|
352
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}
|
353
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|
354
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@Override
|
355
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public QueryEngineList listQueryEngines() throws InvalidToken,
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356
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ServiceFailure, NotAuthorized, NotImplemented {
|
357
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return impl.listQueryEngines(null);
|
358
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}
|
359
|
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360
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@Override
|
361
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public InputStream query(String queryEngine, String query) throws InvalidToken,
|
362
|
ServiceFailure, NotAuthorized, InvalidRequest, NotImplemented,
|
363
|
NotFound {
|
364
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return impl.query(null, queryEngine, query);
|
365
|
}
|
366
|
|
367
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@Override
|
368
|
public ObjectLocationList resolve(Identifier pid) throws InvalidToken,
|
369
|
ServiceFailure, NotAuthorized, NotFound, NotImplemented {
|
370
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return impl.resolve(null, pid);
|
371
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}
|
372
|
|
373
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@Override
|
374
|
@Deprecated
|
375
|
public ObjectLocationList resolve(Session session, Identifier pid)
|
376
|
throws InvalidToken, ServiceFailure, NotAuthorized, NotFound,
|
377
|
NotImplemented {
|
378
|
return impl.resolve(session, pid);
|
379
|
}
|
380
|
|
381
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@Override
|
382
|
public ObjectList search(String queryType, String query) throws InvalidToken,
|
383
|
ServiceFailure, NotAuthorized, InvalidRequest, NotImplemented {
|
384
|
return impl.search(null, queryType, query);
|
385
|
}
|
386
|
|
387
|
@Override
|
388
|
@Deprecated
|
389
|
public ObjectList search(Session session, String queryType, String query)
|
390
|
throws InvalidToken, ServiceFailure, NotAuthorized, InvalidRequest,
|
391
|
NotImplemented {
|
392
|
return impl.search(session, queryType, query);
|
393
|
}
|
394
|
|
395
|
@Override
|
396
|
public Identifier archive(Identifier pid) throws InvalidToken,
|
397
|
ServiceFailure, NotAuthorized, NotFound, NotImplemented {
|
398
|
String serviceFailure = "4972";
|
399
|
String notFound = "4971";
|
400
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
401
|
"The object specified by "+pid.getValue()+" does not exist at this node.");
|
402
|
return impl.archive(null, pid);
|
403
|
}
|
404
|
|
405
|
@Override
|
406
|
@Deprecated
|
407
|
public Identifier archive(Session session, Identifier pid)
|
408
|
throws InvalidToken, ServiceFailure, InvalidRequest, NotAuthorized,
|
409
|
NotFound, NotImplemented {
|
410
|
String serviceFailure = "4972";
|
411
|
String notFound = "4971";
|
412
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
413
|
"The object specified by "+pid.getValue()+" does not exist at this node.");
|
414
|
return impl.archive(session, pid);
|
415
|
}
|
416
|
|
417
|
@Override
|
418
|
public Identifier create(Identifier pid, InputStream object,
|
419
|
SystemMetadata sysmeta) throws InvalidToken, ServiceFailure,
|
420
|
NotAuthorized, IdentifierNotUnique, UnsupportedType,
|
421
|
InsufficientResources, InvalidSystemMetadata, NotImplemented,
|
422
|
InvalidRequest {
|
423
|
return this.create(null, pid, object, sysmeta);
|
424
|
}
|
425
|
|
426
|
@Override
|
427
|
@Deprecated
|
428
|
public Identifier create(Session session, Identifier pid, InputStream object,
|
429
|
SystemMetadata sysmeta) throws InvalidToken, ServiceFailure,
|
430
|
NotAuthorized, IdentifierNotUnique, UnsupportedType,
|
431
|
InsufficientResources, InvalidSystemMetadata, NotImplemented,
|
432
|
InvalidRequest {
|
433
|
|
434
|
//convert sysmeta to newer version
|
435
|
org.dataone.service.types.v2.SystemMetadata v2Sysmeta = null;
|
436
|
try {
|
437
|
v2Sysmeta = TypeFactory.convertTypeFromType(sysmeta, org.dataone.service.types.v2.SystemMetadata.class);
|
438
|
} catch (Exception e) {
|
439
|
IOUtils.closeQuietly(object);
|
440
|
// report as service failure
|
441
|
ServiceFailure sf = new ServiceFailure("1030", e.getMessage());
|
442
|
sf.initCause(e);
|
443
|
throw sf;
|
444
|
}
|
445
|
|
446
|
return impl.create(session, pid, object, v2Sysmeta);
|
447
|
}
|
448
|
|
449
|
@Override
|
450
|
public Identifier delete(Identifier pid) throws InvalidToken,
|
451
|
ServiceFailure, NotAuthorized, NotFound, NotImplemented {
|
452
|
String serviceFailure = "4962";
|
453
|
String notFound = "4961";
|
454
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
455
|
"The object specified by "+pid.getValue()+" does not exist at this node.");
|
456
|
return impl.delete(null, pid);
|
457
|
}
|
458
|
|
459
|
@Override
|
460
|
@Deprecated
|
461
|
public Identifier delete(Session session, Identifier pid)
|
462
|
throws InvalidToken, ServiceFailure, InvalidRequest, NotAuthorized,
|
463
|
NotFound, NotImplemented {
|
464
|
String serviceFailure = "4962";
|
465
|
String notFound = "4961";
|
466
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
467
|
"The object specified by "+pid.getValue()+" does not exist at this node.");
|
468
|
return impl.delete(session, pid);
|
469
|
}
|
470
|
|
471
|
@Override
|
472
|
public Identifier generateIdentifier(String scheme, String fragment)
|
473
|
throws InvalidToken, ServiceFailure, NotAuthorized, NotImplemented,
|
474
|
InvalidRequest {
|
475
|
return impl.generateIdentifier(null, scheme, fragment);
|
476
|
}
|
477
|
|
478
|
@Override
|
479
|
@Deprecated
|
480
|
public Identifier generateIdentifier(Session session, String scheme, String fragment)
|
481
|
throws InvalidToken, ServiceFailure, NotAuthorized, NotImplemented,
|
482
|
InvalidRequest {
|
483
|
return impl.generateIdentifier(session, scheme, fragment);
|
484
|
}
|
485
|
|
486
|
@Override
|
487
|
public ObjectFormat getFormat(ObjectFormatIdentifier fmtid)
|
488
|
throws ServiceFailure, NotFound, NotImplemented, InvalidRequest {
|
489
|
org.dataone.service.types.v2.ObjectFormat format = impl.getFormat(fmtid);
|
490
|
ObjectFormat v1Format = null;
|
491
|
try {
|
492
|
v1Format = TypeFactory.convertTypeFromType(format, ObjectFormat.class);
|
493
|
} catch (Exception e) {
|
494
|
ServiceFailure sf = new ServiceFailure("4846", e.getMessage());
|
495
|
sf.initCause(e);
|
496
|
throw sf;
|
497
|
}
|
498
|
return v1Format;
|
499
|
}
|
500
|
|
501
|
@Override
|
502
|
public Log getLogRecords(Date fromDate, Date toDate, Event event,
|
503
|
String pidFilter, Integer start, Integer count) throws InvalidToken, InvalidRequest,
|
504
|
ServiceFailure, NotAuthorized, NotImplemented,
|
505
|
InsufficientResources {
|
506
|
return this.getLogRecords(null, fromDate, toDate, event, pidFilter, start, count);
|
507
|
}
|
508
|
|
509
|
@Override
|
510
|
@Deprecated
|
511
|
public Log getLogRecords(Session session, Date fromDate, Date toDate, Event event,
|
512
|
String pidFilter, Integer start, Integer count) throws InvalidToken,
|
513
|
InvalidRequest, ServiceFailure, NotAuthorized, NotImplemented,
|
514
|
InsufficientResources {
|
515
|
Log retLog = new Log();
|
516
|
if(pidFilter != null && !pidFilter.trim().equals("")) {
|
517
|
String serviceFailure = "1490";
|
518
|
String notFound = "1020";
|
519
|
Identifier pid = new Identifier();
|
520
|
pid.setValue(pidFilter);
|
521
|
try {
|
522
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
523
|
"The given PID: "+pid.getValue()+" doesn't exist in this node");
|
524
|
} catch (NotFound e) {
|
525
|
//return 0 record since the pid doesn't exist
|
526
|
logMetacat.info(e.getMessage());
|
527
|
return retLog;
|
528
|
}
|
529
|
|
530
|
}
|
531
|
String eventValue = null;
|
532
|
if(event != null) {
|
533
|
eventValue = event.xmlValue();
|
534
|
}
|
535
|
org.dataone.service.types.v2.Log log = impl.getLogRecords(session, fromDate, toDate, eventValue, pidFilter, start, count);
|
536
|
try {
|
537
|
retLog = TypeFactory.convertTypeFromType(log, Log.class);
|
538
|
//LogV2toV1Converter converter = new LogV2toV1Converter();
|
539
|
//retLog = converter.convert(log);
|
540
|
} catch (Exception e) {
|
541
|
// report as service failure
|
542
|
ServiceFailure sf = new ServiceFailure("1490", e.getMessage());
|
543
|
sf.initCause(e);
|
544
|
throw sf;
|
545
|
}
|
546
|
return retLog;
|
547
|
}
|
548
|
|
549
|
@Override
|
550
|
public boolean hasReservation(Subject subject, Identifier pid)
|
551
|
throws InvalidToken, ServiceFailure, NotFound, NotAuthorized,
|
552
|
NotImplemented, InvalidRequest {
|
553
|
return impl.hasReservation(null, subject, pid);
|
554
|
}
|
555
|
|
556
|
@Override
|
557
|
@Deprecated
|
558
|
public boolean hasReservation(Session session, Subject subject, Identifier pid)
|
559
|
throws InvalidToken, ServiceFailure, NotFound, NotAuthorized,
|
560
|
NotImplemented, InvalidRequest {
|
561
|
return impl.hasReservation(session, subject, pid);
|
562
|
|
563
|
}
|
564
|
|
565
|
@Override
|
566
|
public ChecksumAlgorithmList listChecksumAlgorithms()
|
567
|
throws ServiceFailure, NotImplemented {
|
568
|
return impl.listChecksumAlgorithms();
|
569
|
}
|
570
|
|
571
|
@Override
|
572
|
public ObjectFormatList listFormats() throws ServiceFailure, NotImplemented {
|
573
|
org.dataone.service.types.v2.ObjectFormatList formats = impl.listFormats();
|
574
|
ObjectFormatList retFormats = new ObjectFormatList();
|
575
|
try {
|
576
|
/*if(formats != null) {
|
577
|
List<org.dataone.service.types.v2.ObjectFormat> objectFormatList = formats.getObjectFormatList();
|
578
|
if(objectFormatList != null) {
|
579
|
for(org.dataone.service.types.v2.ObjectFormat format : objectFormatList) {
|
580
|
ObjectFormat v1Format = TypeFactory.convertTypeFromType(format, ObjectFormat.class);
|
581
|
retFormats.addObjectFormat(v1Format);
|
582
|
}
|
583
|
}
|
584
|
|
585
|
}*/
|
586
|
retFormats = TypeFactory.convertTypeFromType(formats, ObjectFormatList.class);
|
587
|
} catch (Exception e) {
|
588
|
// report as service failure
|
589
|
ServiceFailure sf = new ServiceFailure("4841", e.getMessage());
|
590
|
sf.initCause(e);
|
591
|
throw sf;
|
592
|
}
|
593
|
return retFormats;
|
594
|
}
|
595
|
|
596
|
@Override
|
597
|
public NodeList listNodes() throws NotImplemented, ServiceFailure {
|
598
|
org.dataone.service.types.v2.NodeList nodes = impl.listNodes();
|
599
|
NodeList retNodes = null;
|
600
|
try {
|
601
|
retNodes = TypeFactory.convertTypeFromType(nodes, NodeList.class);
|
602
|
} catch (Exception e) {
|
603
|
// report as service failure
|
604
|
ServiceFailure sf = new ServiceFailure("4801", e.getMessage());
|
605
|
sf.initCause(e);
|
606
|
throw sf;
|
607
|
}
|
608
|
return retNodes;
|
609
|
}
|
610
|
|
611
|
@Override
|
612
|
public Date ping() throws NotImplemented, ServiceFailure,
|
613
|
InsufficientResources {
|
614
|
return impl.ping();
|
615
|
}
|
616
|
|
617
|
@Override
|
618
|
public Identifier registerSystemMetadata(Identifier pid,
|
619
|
SystemMetadata sysmeta) throws NotImplemented, NotAuthorized,
|
620
|
ServiceFailure, InvalidRequest, InvalidSystemMetadata, InvalidToken {
|
621
|
return this.registerSystemMetadata(null, pid, sysmeta);
|
622
|
|
623
|
}
|
624
|
|
625
|
@Override
|
626
|
@Deprecated
|
627
|
public Identifier registerSystemMetadata(Session session, Identifier pid,
|
628
|
SystemMetadata sysmeta) throws NotImplemented, NotAuthorized,
|
629
|
ServiceFailure, InvalidRequest, InvalidSystemMetadata, InvalidToken {
|
630
|
if (pid == null || pid.getValue().trim().equals("")) {
|
631
|
throw new InvalidRequest("4863", "The pid should not be null in the register system metadata request");
|
632
|
}
|
633
|
if(sysmeta == null) {
|
634
|
throw new InvalidRequest("4863", "The system metadata object should not be null in the register system metadata request for the pid"+pid.getValue());
|
635
|
}
|
636
|
//convert sysmeta to newer version
|
637
|
org.dataone.service.types.v2.SystemMetadata v2Sysmeta = null;
|
638
|
try {
|
639
|
v2Sysmeta = TypeFactory.convertTypeFromType(sysmeta, org.dataone.service.types.v2.SystemMetadata.class);
|
640
|
|
641
|
} catch (Exception e) {
|
642
|
// report as service failure
|
643
|
ServiceFailure sf = new ServiceFailure("1030", e.getMessage());
|
644
|
sf.initCause(e);
|
645
|
throw sf;
|
646
|
}
|
647
|
//this method will apply to the objects whose authoritative mn is v1.
|
648
|
D1NodeVersionChecker checker = new D1NodeVersionChecker(v2Sysmeta.getAuthoritativeMemberNode());
|
649
|
String version = checker.getVersion("MNRead");
|
650
|
if(version == null) {
|
651
|
throw new ServiceFailure("4862", "Couldn't determine the MNRead version of the authoritative member node for the pid "+pid.getValue());
|
652
|
} else if (version.equalsIgnoreCase(D1NodeVersionChecker.V2)) {
|
653
|
//we don't apply this method to an object whose authoritative node is v2
|
654
|
throw new NotAuthorized("4861", edu.ucsb.nceas.metacat.dataone.CNodeService.V2V1MISSMATCH);
|
655
|
} else if (!version.equalsIgnoreCase(D1NodeVersionChecker.V1)) {
|
656
|
//we don't understand this version (it is not v1 or v2)
|
657
|
throw new InvalidRequest("4863", "The version of the MNRead is "+version+" for the authoritative member node of the object "+pid.getValue()+". We don't support it.");
|
658
|
}
|
659
|
//set the serial version to one
|
660
|
v2Sysmeta.setSerialVersion(BigInteger.ONE);
|
661
|
// the v2(impl).registerSysteMetadata will reset the system metadata modification date
|
662
|
//for the objects whose authoritative member node is v1.
|
663
|
return impl.registerSystemMetadata(session, pid, v2Sysmeta);
|
664
|
}
|
665
|
|
666
|
@Override
|
667
|
public Identifier reserveIdentifier(Identifier pid) throws InvalidToken,
|
668
|
ServiceFailure, NotAuthorized, IdentifierNotUnique, NotImplemented,
|
669
|
InvalidRequest {
|
670
|
return impl.reserveIdentifier(null, pid);
|
671
|
}
|
672
|
|
673
|
@Override
|
674
|
@Deprecated
|
675
|
public Identifier reserveIdentifier(Session session, Identifier pid)
|
676
|
throws InvalidToken, ServiceFailure, NotAuthorized,
|
677
|
IdentifierNotUnique, NotImplemented, InvalidRequest {
|
678
|
return impl.reserveIdentifier(session, pid);
|
679
|
}
|
680
|
|
681
|
@Override
|
682
|
public boolean setObsoletedBy(Identifier pid, Identifier obsoletedByPid, long serialVersion)
|
683
|
throws NotImplemented, NotFound, NotAuthorized, ServiceFailure,
|
684
|
InvalidRequest, InvalidToken, VersionMismatch {
|
685
|
/*String serviceFailure = "4941";
|
686
|
String notFound = "4944";
|
687
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
688
|
"No object could be found for given PID: "+obsoletedByPid.getValue());*/
|
689
|
return impl.setObsoletedBy(null, pid, obsoletedByPid, serialVersion);
|
690
|
}
|
691
|
|
692
|
@Override
|
693
|
@Deprecated
|
694
|
public boolean setObsoletedBy(Session session, Identifier pid, Identifier obsoletedByPid, long serialVersion)
|
695
|
throws NotImplemented, NotFound,
|
696
|
NotAuthorized, ServiceFailure, InvalidRequest, InvalidToken,
|
697
|
VersionMismatch {
|
698
|
/*String serviceFailure = "4941";
|
699
|
String notFound = "4944";
|
700
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
701
|
"No object could be found for given PID: "+obsoletedByPid.getValue());*/
|
702
|
return impl.setObsoletedBy(session, pid, obsoletedByPid, serialVersion);
|
703
|
|
704
|
}
|
705
|
|
706
|
@Override
|
707
|
public boolean isAuthorized(Identifier pid, Permission permission)
|
708
|
throws ServiceFailure, InvalidToken, NotFound, NotAuthorized,
|
709
|
NotImplemented, InvalidRequest {
|
710
|
String serviceFailure = "1760";
|
711
|
String notFound = "1800";
|
712
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
713
|
"The object specified by "+pid.getValue()+" does not exist at this node.");
|
714
|
return impl.isAuthorized(null, pid, permission);
|
715
|
}
|
716
|
|
717
|
@Override
|
718
|
@Deprecated
|
719
|
public boolean isAuthorized(Session session, Identifier pid, Permission permission)
|
720
|
throws ServiceFailure, InvalidToken, NotFound, NotAuthorized,
|
721
|
NotImplemented, InvalidRequest {
|
722
|
String serviceFailure = "1760";
|
723
|
String notFound = "1800";
|
724
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object specified by "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
725
|
"The object specified by "+pid.getValue()+" does not exist at this node.");
|
726
|
return impl.isAuthorized(session, pid, permission);
|
727
|
}
|
728
|
|
729
|
@Override
|
730
|
public boolean setAccessPolicy(Identifier pid,
|
731
|
AccessPolicy accessPolicy, long serialVersion)
|
732
|
throws InvalidToken, NotFound, NotImplemented, NotAuthorized,
|
733
|
ServiceFailure, InvalidRequest, VersionMismatch {
|
734
|
String serviceFailure = "4430";
|
735
|
String notFound = "4400";
|
736
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
737
|
"No object could be found for given PID: "+pid.getValue());
|
738
|
return impl.setAccessPolicy(null, pid, accessPolicy, serialVersion);
|
739
|
}
|
740
|
|
741
|
@Override
|
742
|
@Deprecated
|
743
|
public boolean setAccessPolicy(Session session, Identifier pid,
|
744
|
AccessPolicy accessPolicy, long serialVersion) throws InvalidToken, NotFound,
|
745
|
NotImplemented, NotAuthorized, ServiceFailure, InvalidRequest,
|
746
|
VersionMismatch {
|
747
|
String serviceFailure = "4430";
|
748
|
String notFound = "4400";
|
749
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
750
|
"No object could be found for given PID: "+pid.getValue());
|
751
|
return impl.setAccessPolicy(session, pid, accessPolicy, serialVersion);
|
752
|
}
|
753
|
|
754
|
@Override
|
755
|
public Identifier setRightsHolder(Identifier pid, Subject userId, long serialVersion)
|
756
|
throws InvalidToken, ServiceFailure, NotFound, NotAuthorized,
|
757
|
NotImplemented, InvalidRequest, VersionMismatch {
|
758
|
String serviceFailure = "4490";
|
759
|
String notFound = "4460";
|
760
|
impl.checkV1SystemMetaPidExist(pid, serviceFailure, "The object for given PID "+pid.getValue()+" couldn't be identified if it exists", notFound,
|
761
|
"No object could be found for given PID: "+pid.getValue());
|
762
|
return impl.setRightsHolder(null, pid, userId, serialVersion);
|
763
|
}
|
764
|
|
765
|
@Override
|
766
|
@Deprecated
|
767
|
public Identifier setRightsHolder(Session session, Identifier pid,
|
768
|
Subject userId, long serialVersion) throws InvalidToken, ServiceFailure,
|
769
|
NotFound, NotAuthorized, NotImplemented, InvalidRequest,
|
770
|
VersionMismatch {
|
771
|
return impl.setRightsHolder(session, pid, userId, serialVersion);
|
772
|
|
773
|
}
|
774
|
|
775
|
}
|