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2099
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jones
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/**
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* '$RCSfile$'
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* Copyright: 2004 Regents of the University of California and the
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* National Center for Ecological Analysis and Synthesis
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2
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jones
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*
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2099
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jones
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* '$Author$'
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* '$Date$'
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* '$Revision$'
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2
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jones
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*
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2099
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jones
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* This program is free software; you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation; either version 2 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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2
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jones
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*/
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5
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jones
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/*
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19
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jones
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* Drop all of the objects in proper order
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2
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jones
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*/
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72
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bojilova
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set echo off
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20
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jones
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DROP SEQUENCE xml_nodes_id_seq;
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203
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jones
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DROP SEQUENCE xml_revisions_id_seq;
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123
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jones
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DROP SEQUENCE xml_catalog_id_seq;
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472
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berkley
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DROP SEQUENCE xml_relation_id_seq;
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517
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berkley
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DROP SEQUENCE xml_replication_id_seq;
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616
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bojilova
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DROP SEQUENCE accnum_uniqueid_seq;
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749
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bojilova
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DROP SEQUENCE xml_documents_id_seq;
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759
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bojilova
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DROP SEQUENCE accession_number_id_seq;
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2099
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jones
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DROP SEQUENCE access_log_seq;
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759
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bojilova
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/* Drop triggers are not necessary */
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DROP TRIGGER xml_nodes_before_insert;
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203
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jones
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DROP TRIGGER xml_revisions_before_insert;
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93
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bojilova
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DROP TRIGGER xml_catalog_before_insert;
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472
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berkley
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DROP TRIGGER xml_relation_before_insert;
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517
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berkley
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DROP TRIGGER xml_replication_before_insert;
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759
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bojilova
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DROP TRIGGER accession_number_before_insert;
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2099
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jones
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DROP TRIGGER access_log_before_insert;
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72
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bojilova
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123
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jones
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DROP TABLE xml_index;
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414
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bojilova
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DROP TABLE xml_access;
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1589
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tao
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DROP TABLE xml_accesssubtree;
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414
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bojilova
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DROP TABLE xml_revisions;
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689
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bojilova
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DROP TABLE xml_relation;
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5
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jones
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DROP TABLE xml_documents;
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20
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jones
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DROP TABLE xml_nodes;
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517
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berkley
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DROP TABLE xml_replication;
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698
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bojilova
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DROP TABLE xml_catalog;
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759
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bojilova
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DROP TABLE accession_number;
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2099
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jones
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DROP TABLE access_log;
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2109
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costa
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DROP TABLE harvest_site_schedule;
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DROP TABLE harvest_log;
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DROP TABLE harvest_detail_log;
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3
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jones
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517
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berkley
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/*
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*Replication -- table to store servers that metacat is replicated to
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*/
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CREATE TABLE xml_replication (
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544
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berkley
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serverid NUMBER(20),
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server VARCHAR2(512),
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last_checked DATE,
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1292
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tao
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replicate NUMBER(1),
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datareplicate NUMBER(1),
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hub NUMBER(1),
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544
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berkley
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CONSTRAINT xml_replication_pk PRIMARY KEY (serverid)
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);
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CREATE SEQUENCE xml_replication_id_seq;
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CREATE TRIGGER xml_replication_before_insert
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BEFORE INSERT ON xml_replication FOR EACH ROW
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BEGIN
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SELECT xml_replication_id_seq.nextval
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INTO :new.serverid
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FROM dual;
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END;
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/
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517
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berkley
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1292
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tao
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INSERT INTO xml_replication (server, replicate, datareplicate, hub)
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VALUES ('localhost', '0', '0', '0');
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550
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berkley
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3
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jones
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/*
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20
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jones
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* Nodes -- table to store XML Nodes (both elements and attributes)
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3
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jones
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*/
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759
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bojilova
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CREATE SEQUENCE xml_nodes_id_seq;
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20
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jones
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CREATE TABLE xml_nodes (
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123
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jones
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nodeid NUMBER(20), -- the unique node id (pk)
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nodeindex NUMBER(10), -- order of nodes within parent
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nodetype VARCHAR2(20), -- type (DOCUMENT, COMMENT, PI,
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-- ELEMENT, ATTRIBUTE, TEXT)
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nodename VARCHAR2(250), -- the name of an element or attribute
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825
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bojilova
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nodeprefix VARCHAR2(50), -- the namespace prefix of an element
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-- or attribute
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123
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jones
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nodedata VARCHAR2(4000), -- the data for this node (e.g.,
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-- for TEXT it is the content)
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parentnodeid NUMBER(20), -- index of the parent of this node
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rootnodeid NUMBER(20), -- index of the root node of this tree
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317
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bojilova
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docid VARCHAR2(250), -- index to the document id
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3
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jones
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date_created DATE,
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date_updated DATE,
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20
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jones
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CONSTRAINT xml_nodes_pk PRIMARY KEY (nodeid),
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123
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jones
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CONSTRAINT xml_nodes_root_fk
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FOREIGN KEY (rootnodeid) REFERENCES xml_nodes,
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20
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jones
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CONSTRAINT xml_nodes_parent_fk
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FOREIGN KEY (parentnodeid) REFERENCES xml_nodes
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3
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jones
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);
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759
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bojilova
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CREATE TRIGGER xml_nodes_before_insert
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BEFORE INSERT ON xml_nodes FOR EACH ROW
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BEGIN
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SELECT xml_nodes_id_seq.nextval
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INTO :new.nodeid
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FROM dual;
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END;
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/
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440
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bojilova
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/*
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759
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bojilova
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* Indexes of rootnodeid, parentnodeid, and nodename in xml_nodes
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440
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bojilova
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*/
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CREATE INDEX xml_nodes_idx1 ON xml_nodes (rootnodeid);
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CREATE INDEX xml_nodes_idx2 ON xml_nodes (parentnodeid);
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755
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bojilova
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CREATE INDEX xml_nodes_idx3 ON xml_nodes (nodename);
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440
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bojilova
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3
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jones
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/*
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698
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bojilova
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* XML Catalog -- table to store all external sources for XML documents
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*/
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CREATE TABLE xml_catalog (
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catalog_id NUMBER(20), -- the id for this catalog entry
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entry_type VARCHAR2(500), -- the type of this catalog entry
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-- (e.g., DTD, XSD, XSL)
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source_doctype VARCHAR2(500), -- the source public_id for transforms
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target_doctype VARCHAR2(500), -- the target public_id for transforms
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public_id VARCHAR2(500), -- the unique id for this type
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system_id VARCHAR2(1000), -- the local location of the object
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CONSTRAINT xml_catalog_pk PRIMARY KEY (catalog_id),
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CONSTRAINT xml_catalog_uk UNIQUE
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(entry_type, source_doctype, target_doctype, public_id)
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);
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CREATE SEQUENCE xml_catalog_id_seq;
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CREATE TRIGGER xml_catalog_before_insert
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BEFORE INSERT ON xml_catalog FOR EACH ROW
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BEGIN
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SELECT xml_catalog_id_seq.nextval
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INTO :new.catalog_id
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FROM dual;
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END;
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/
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/*
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72
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bojilova
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* Documents -- table to store XML documents
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5
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jones
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*/
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CREATE TABLE xml_documents (
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165
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jones
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docid VARCHAR2(250), -- the document id #
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rootnodeid NUMBER(20), -- reference to root node of the DOM
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123
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jones
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docname VARCHAR2(100), -- usually the root element name
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doctype VARCHAR2(100), -- public id indicating document type
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414
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bojilova
|
user_owner VARCHAR2(100), -- the user owned the document
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user_updated VARCHAR2(100), -- the user updated the document
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825
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bojilova
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server_location NUMBER(20), -- the server on which this document
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843
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berkley
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-- originates
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825
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bojilova
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rev NUMBER(10) DEFAULT 1,--the revision number of the docume
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5
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jones
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date_created DATE,
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date_updated DATE,
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698
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bojilova
|
public_access NUMBER(1), -- flag for public access
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catalog_id NUMBER(20), -- reference to xml_catalog
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5
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jones
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CONSTRAINT xml_documents_pk PRIMARY KEY (docid),
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544
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berkley
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CONSTRAINT xml_documents_rep_fk
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689
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bojilova
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FOREIGN KEY (server_location) REFERENCES xml_replication,
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5
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jones
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CONSTRAINT xml_documents_root_fk
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698
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bojilova
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FOREIGN KEY (rootnodeid) REFERENCES xml_nodes,
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CONSTRAINT xml_documents_catalog_fk
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FOREIGN KEY (catalog_id) REFERENCES xml_catalog
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5
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jones
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);
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72
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bojilova
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/*
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440
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bojilova
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* Index of <docid,doctype> in xml_document
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*/
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CREATE INDEX xml_documents_idx1 ON xml_documents (docid, doctype);
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/*
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203
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jones
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* Revised Documents -- table to store XML documents saved after an UPDATE
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* or DELETE
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*/
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CREATE TABLE xml_revisions (
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revisionid NUMBER(20), -- the revision number we are saving
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docid VARCHAR2(250), -- the document id #
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rootnodeid NUMBER(20), -- reference to root node of the DOM
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docname VARCHAR2(100), -- usually the root element name
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doctype VARCHAR2(100), -- public id indicating document type
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414
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bojilova
|
user_owner VARCHAR2(100),
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user_updated VARCHAR2(100),
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556
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bojilova
|
server_location NUMBER(20),
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689
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bojilova
|
rev NUMBER(10),
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203
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jones
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date_created DATE,
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date_updated DATE,
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698
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bojilova
|
public_access NUMBER(1), -- flag for public access
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catalog_id NUMBER(20), -- reference to xml_catalog
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203
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jones
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CONSTRAINT xml_revisions_pk PRIMARY KEY (revisionid),
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552
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berkley
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CONSTRAINT xml_revisions_rep_fk
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689
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bojilova
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FOREIGN KEY (server_location) REFERENCES xml_replication,
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203
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jones
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CONSTRAINT xml_revisions_root_fk
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698
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bojilova
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FOREIGN KEY (rootnodeid) REFERENCES xml_nodes,
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CONSTRAINT xml_revisions_catalog_fk
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FOREIGN KEY (catalog_id) REFERENCES xml_catalog
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203
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jones
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);
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CREATE SEQUENCE xml_revisions_id_seq;
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CREATE TRIGGER xml_revisions_before_insert
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BEFORE INSERT ON xml_revisions FOR EACH ROW
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BEGIN
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SELECT xml_revisions_id_seq.nextval
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INTO :new.revisionid
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FROM dual;
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END;
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/
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|
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| 227 |
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/*
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| 228 |
698
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bojilova
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* ACL -- table to store ACL for XML documents by principals
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| 229 |
72
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bojilova
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*/
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| 230 |
698
|
bojilova
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CREATE TABLE xml_access (
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docid VARCHAR2(250), -- the document id #
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accessfileid VARCHAR2(250), -- the document id # for the access file
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| 233 |
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principal_name VARCHAR2(100), -- name of user, group, etc.
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| 234 |
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permission NUMBER(1), -- "read", "write", "all"
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perm_type VARCHAR2(32), -- "allowed" or "denied"
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| 236 |
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perm_order VARCHAR2(32), -- "allow first" or "deny first"
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| 237 |
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begin_time DATE, -- the time that permission begins
|
| 238 |
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end_time DATE, -- the time that permission ends
|
| 239 |
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ticket_count NUMBER(5), -- ticket counter for that permission
|
| 240 |
1420
|
tao
|
subtreeid VARCHAR2(32), -- sub tree id
|
| 241 |
|
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startnodeid NUMBER(20), -- start node for sub tree
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| 242 |
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endnodeid NUMBER(20), -- end node for sub tree
|
| 243 |
698
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bojilova
|
CONSTRAINT xml_access_ck CHECK (begin_time < end_time),
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| 244 |
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CONSTRAINT xml_access_accessfileid_fk
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| 245 |
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FOREIGN KEY (accessfileid) REFERENCES xml_documents
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| 246 |
72
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bojilova
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);
|
| 247 |
|
|
|
| 248 |
123
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jones
|
/*
|
| 249 |
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* Index of Nodes -- table to store precomputed paths through tree for
|
| 250 |
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* quick searching in structured searches
|
| 251 |
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*/
|
| 252 |
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CREATE TABLE xml_index (
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| 253 |
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nodeid NUMBER(20), -- the unique node id
|
| 254 |
177
|
jones
|
path VARCHAR2(200), -- precomputed path through tree
|
| 255 |
317
|
bojilova
|
docid VARCHAR2(250), -- index to the document id
|
| 256 |
|
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doctype VARCHAR2(100), -- public id indicating document type
|
| 257 |
825
|
bojilova
|
parentnodeid NUMBER(20), -- id of the parent of the node
|
| 258 |
|
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-- represented by this row
|
| 259 |
123
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jones
|
CONSTRAINT xml_index_pk PRIMARY KEY (nodeid,path),
|
| 260 |
317
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bojilova
|
CONSTRAINT xml_index_nodeid_fk FOREIGN KEY (nodeid) REFERENCES xml_nodes,
|
| 261 |
|
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CONSTRAINT xml_index_docid_fk
|
| 262 |
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FOREIGN KEY (docid) REFERENCES xml_documents
|
| 263 |
123
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jones
|
);
|
| 264 |
163
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bojilova
|
|
| 265 |
|
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/*
|
| 266 |
177
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jones
|
* Index of the paths in xml_index
|
| 267 |
|
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*/
|
| 268 |
|
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CREATE INDEX xml_index_idx1 ON xml_index (path);
|
| 269 |
|
|
|
| 270 |
472
|
berkley
|
CREATE TABLE xml_relation (
|
| 271 |
689
|
bojilova
|
relationid NUMBER(20) PRIMARY KEY, -- unique id
|
| 272 |
743
|
jones
|
docid VARCHAR2(250), -- the docid of the package file
|
| 273 |
689
|
bojilova
|
-- that this relation came from
|
| 274 |
743
|
jones
|
packagetype VARCHAR2(250), -- the type of the package
|
| 275 |
689
|
bojilova
|
subject VARCHAR2(512) NOT NULL, -- the subject of the relation
|
| 276 |
743
|
jones
|
subdoctype VARCHAR2(128), -- the doctype of the subject
|
| 277 |
689
|
bojilova
|
relationship VARCHAR2(128) NOT NULL,-- the relationship type
|
| 278 |
|
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object VARCHAR2(512) NOT NULL, -- the object of the relation
|
| 279 |
|
|
objdoctype VARCHAR2(128), -- the doctype of the object
|
| 280 |
1604
|
tao
|
CONSTRAINT xml_relation_uk UNIQUE (docid, subject, relationship, object),
|
| 281 |
689
|
bojilova
|
CONSTRAINT xml_relation_docid_fk
|
| 282 |
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|
FOREIGN KEY (docid) REFERENCES xml_documents
|
| 283 |
472
|
berkley
|
);
|
| 284 |
|
|
|
| 285 |
|
|
CREATE SEQUENCE xml_relation_id_seq;
|
| 286 |
|
|
|
| 287 |
|
|
CREATE TRIGGER xml_relation_before_insert
|
| 288 |
|
|
BEFORE INSERT ON xml_relation FOR EACH ROW
|
| 289 |
|
|
BEGIN
|
| 290 |
|
|
SELECT xml_relation_id_seq.nextval
|
| 291 |
|
|
INTO :new.relationid
|
| 292 |
|
|
FROM dual;
|
| 293 |
759
|
bojilova
|
END;
|
| 294 |
472
|
berkley
|
/
|
| 295 |
|
|
|
| 296 |
759
|
bojilova
|
/*
|
| 297 |
|
|
* Table used as Unique ID generator for the uniqueid part of Accession#
|
| 298 |
|
|
*/
|
| 299 |
|
|
CREATE SEQUENCE accession_number_id_seq;
|
| 300 |
|
|
CREATE TABLE accession_number (
|
| 301 |
|
|
uniqueid NUMBER(20) PRIMARY KEY,
|
| 302 |
|
|
site_code VARCHAR2(100),
|
| 303 |
|
|
date_created DATE
|
| 304 |
|
|
);
|
| 305 |
|
|
CREATE TRIGGER accession_number_before_insert
|
| 306 |
|
|
BEFORE INSERT ON accession_number FOR EACH ROW
|
| 307 |
|
|
BEGIN
|
| 308 |
|
|
SELECT accession_number_id_seq.nextval
|
| 309 |
|
|
INTO :new.uniqueid
|
| 310 |
|
|
FROM dual;
|
| 311 |
|
|
END;
|
| 312 |
|
|
/
|
| 313 |
|
|
|
| 314 |
1530
|
tao
|
/*
|
| 315 |
1589
|
tao
|
* accesssubtree -- table to store access subtree info
|
| 316 |
1530
|
tao
|
*/
|
| 317 |
|
|
CREATE TABLE xml_accesssubtree (
|
| 318 |
|
|
docid VARCHAR2(250), -- the document id #
|
| 319 |
|
|
rev NUMBER(10) DEFAULT 1, --the revision number of the docume
|
| 320 |
|
|
controllevel VARCHAR2(50), -- the level it control -- document or subtree
|
| 321 |
|
|
subtreeid VARCHAR2(250), -- the subtree id
|
| 322 |
|
|
startnodeid NUMBER(20), -- the start node id of access subtree
|
| 323 |
1625
|
tao
|
endnodeid NUMBER(20), -- the end node if of access subtree
|
| 324 |
|
|
CONSTRAINT xml_accesssubtree_docid_fk
|
| 325 |
|
|
FOREIGN KEY (docid) REFERENCES xml_documents
|
| 326 |
1530
|
tao
|
);
|
| 327 |
|
|
|
| 328 |
2099
|
jones
|
/*
|
| 329 |
|
|
* Logging -- table to store metadata and data access log
|
| 330 |
|
|
*/
|
| 331 |
|
|
CREATE TABLE access_log (
|
| 332 |
|
|
entryid NUMBER(20), -- the identifier for the log event
|
| 333 |
|
|
ip_address VARCHAR2(512), -- the ip address inititiating the event
|
| 334 |
|
|
principal VARCHAR2(512), -- the user initiiating the event
|
| 335 |
|
|
docid VARCHAR2(250), -- the document id #
|
| 336 |
|
|
event VARCHAR2(512), -- the code symbolizing the event type
|
| 337 |
|
|
date_logged DATE, -- the datetime on which the event occurred
|
| 338 |
|
|
CONSTRAINT access_log_pk PRIMARY KEY (entryid)
|
| 339 |
|
|
);
|
| 340 |
|
|
|
| 341 |
|
|
CREATE SEQUENCE access_log_id_seq;
|
| 342 |
|
|
CREATE TRIGGER access_log_before_insert
|
| 343 |
|
|
BEFORE INSERT ON access_log FOR EACH ROW
|
| 344 |
|
|
BEGIN
|
| 345 |
|
|
SELECT access_log_id_seq.nextval
|
| 346 |
|
|
INTO :new.entryid
|
| 347 |
|
|
FROM dual;
|
| 348 |
|
|
END;
|
| 349 |
2112
|
costa
|
/
|
| 350 |
2109
|
costa
|
|
| 351 |
|
|
/*
|
| 352 |
|
|
* harvest_site_schedule -- table to store harvest sites and schedule info
|
| 353 |
|
|
*/
|
| 354 |
|
|
CREATE TABLE harvest_site_schedule (
|
| 355 |
|
|
site_schedule_id NUMBER, -- unique id
|
| 356 |
|
|
documentlisturl VARCHAR2(255), -- URL of the site harvest document list
|
| 357 |
|
|
ldapdn VARCHAR2(255), -- LDAP distinguished name for site account
|
| 358 |
|
|
datenextharvest DATE, -- scheduled date of next harvest
|
| 359 |
|
|
datelastharvest DATE, -- recorded date of last harvest
|
| 360 |
|
|
updatefrequency NUMBER, -- the harvest update frequency
|
| 361 |
|
|
unit VARCHAR2(50), -- update unit -- days weeks or months
|
| 362 |
|
|
contact_email VARCHAR2(50), -- email address of the site contact person
|
| 363 |
|
|
ldappwd VARCHAR2(20), -- LDAP password for site account
|
| 364 |
|
|
CONSTRAINT harvest_site_schedule_pk PRIMARY KEY (site_schedule_id)
|
| 365 |
|
|
);
|
| 366 |
|
|
|
| 367 |
|
|
/*
|
| 368 |
|
|
* harvest_log -- table to log entries for harvest operations
|
| 369 |
|
|
*/
|
| 370 |
|
|
CREATE TABLE harvest_log (
|
| 371 |
|
|
harvest_log_id NUMBER, -- unique id
|
| 372 |
|
|
harvest_date DATE, -- date of the current harvest
|
| 373 |
|
|
status NUMBER, -- non-zero indicates an error status
|
| 374 |
|
|
message VARCHAR2(1000), -- text message for this log entry
|
| 375 |
|
|
harvest_operation_code VARCHAR2(30), -- the type of harvest operation
|
| 376 |
2112
|
costa
|
site_schedule_id NUMBER, -- site schedule id, or 0 if no site
|
| 377 |
|
|
CONSTRAINT harvest_log_pk PRIMARY KEY (harvest_log_id)
|
| 378 |
2109
|
costa
|
);
|
| 379 |
|
|
|
| 380 |
|
|
/*
|
| 381 |
|
|
* harvest_detail_log -- table to log detailed info about documents that
|
| 382 |
|
|
* generated errors during the harvest
|
| 383 |
|
|
*/
|
| 384 |
|
|
CREATE TABLE harvest_detail_log (
|
| 385 |
|
|
detail_log_id NUMBER, -- unique id
|
| 386 |
|
|
harvest_log_id NUMBER, -- ponter to the related log entry
|
| 387 |
|
|
scope VARCHAR2(50), -- document scope
|
| 388 |
|
|
identifier NUMBER, -- document identifier
|
| 389 |
|
|
revision NUMBER, -- document revision
|
| 390 |
|
|
document_url VARCHAR2(255), -- document URL
|
| 391 |
|
|
error_message VARCHAR2(1000), -- text error message
|
| 392 |
|
|
document_type VARCHAR2(100), -- document type
|
| 393 |
|
|
CONSTRAINT harvest_detail_log_pk PRIMARY KEY (detail_log_id),
|
| 394 |
2112
|
costa
|
CONSTRAINT harvest_detail_log_fk
|
| 395 |
2109
|
costa
|
FOREIGN KEY (harvest_log_id) REFERENCES harvest_log
|
| 396 |
|
|
);
|