|
1
|
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
|
|
2
|
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
|
|
3
|
|
|
4
|
<html xmlns="http://www.w3.org/1999/xhtml">
|
|
5
|
<head>
|
|
6
|
<meta http-equiv="Content-Type" content=
|
|
7
|
"text/html; charset=us-ascii" />
|
|
8
|
<meta name="generator" content="pandoc" />
|
|
9
|
<style type="text/css">
|
|
10
|
/*<![CDATA[*/
|
|
11
|
ol.decimal { list-style-type: decimal; }
|
|
12
|
li { padding-bottom: 5px; }
|
|
13
|
blockquote {
|
|
14
|
background-color: #f5f5f5;
|
|
15
|
margin: 10px 15px 5px 20px;
|
|
16
|
padding: 1px 0px 1px 10px;
|
|
17
|
}
|
|
18
|
|
|
19
|
.keyword {
|
|
20
|
color: #00008b;
|
|
21
|
}
|
|
22
|
|
|
23
|
.type {
|
|
24
|
color: #2b91af;
|
|
25
|
}
|
|
26
|
|
|
27
|
.string {
|
|
28
|
color: #810541;
|
|
29
|
}
|
|
30
|
|
|
31
|
/*]]>*/
|
|
32
|
</style>
|
|
33
|
|
|
34
|
<title>Metacat Install - Registry</title>
|
|
35
|
<link rel="stylesheet" type="text/css" href="default.css" />
|
|
36
|
</head>
|
|
37
|
|
|
38
|
<body>
|
|
39
|
<table class="tabledefault" width="100%">
|
|
40
|
<tr>
|
|
41
|
<td rowspan="2"><img src="images/KNBLogo.gif" /></td>
|
|
42
|
|
|
43
|
<td colspan="7">
|
|
44
|
<div class="title">
|
|
45
|
Metacat Installation - Registry
|
|
46
|
</div>
|
|
47
|
</td>
|
|
48
|
</tr>
|
|
49
|
|
|
50
|
<tr>
|
|
51
|
<td><a href="/" class="toollink">KNB Home</a></td>
|
|
52
|
|
|
53
|
<td><a href="/data.html" class="toollink">Data</a></td>
|
|
54
|
|
|
55
|
<td><a href="/people.html" class="toollink">People</a></td>
|
|
56
|
|
|
57
|
<td><a href="/informatics" class=
|
|
58
|
"toollink">Informatics</a></td>
|
|
59
|
|
|
60
|
<td><a href="/biodiversity" class=
|
|
61
|
"toollink">Biocomplexity</a></td>
|
|
62
|
|
|
63
|
<td><a href="/education" class="toollink">Education</a></td>
|
|
64
|
|
|
65
|
<td><a href="/software" class="toollink">Software</a></td>
|
|
66
|
</tr>
|
|
67
|
</table>
|
|
68
|
<hr />
|
|
69
|
|
|
70
|
<table class="tabledefault" width="100%">
|
|
71
|
<tr>
|
|
72
|
<td class="tablehead" colspan="2">
|
|
73
|
<p class="emphasis">Installing the Metacat Registry</p>
|
|
74
|
</td>
|
|
75
|
</tr>
|
|
76
|
|
|
77
|
<tr>
|
|
78
|
<td>Author: Shaun Walbridge<br />
|
|
79
|
Date: 06/06/2008<br /></td>
|
|
80
|
</tr>
|
|
81
|
</table>
|
|
82
|
|
|
83
|
<h1 id="registry-installation">Registry Installation</h1>
|
|
84
|
|
|
85
|
<h2 id="whats-it-for">What's it for?</h2>
|
|
86
|
|
|
87
|
<p>The Metacat Registry provides an easy mechanism to create and
|
|
88
|
edit simple EML metadata documents, and accounts for your Metacat
|
|
89
|
users. It is an optional component of Metacat, but is useful when
|
|
90
|
you need very low barriers to creating simple EML, or have users
|
|
91
|
unable to use Morpho. The LDAP account management interface is
|
|
92
|
useful if you are authenticating users against LDAP, and need to
|
|
93
|
provide a basic mechanism for managing user accounts.</p>
|
|
94
|
|
|
95
|
<h2 id="installation-instructions">Installation Instructions</h2>
|
|
96
|
|
|
97
|
<p>The Registry can be installed on any machine Metacat runs on,
|
|
98
|
but does require additional legwork to get it installed. It
|
|
99
|
requires that Metacat is set deployed behind Apache, as our
|
|
100
|
recommended installation platform, and the instructions assume
|
|
101
|
Apache is already installed and working correctly.</p>
|
|
102
|
|
|
103
|
<h2 id="steps">Steps</h2>
|
|
104
|
|
|
105
|
<ol class="decimal">
|
|
106
|
<li>
|
|
107
|
<p>Download and extract the Metacat release:</p>
|
|
108
|
<blockquote>
|
|
109
|
<pre><span class="type">mkdir</span> metacat && cd metacat
|
|
110
|
<span class="type">wget</span> http://knb.ecoinformatics.org/software/dist/metacat-src-1.8.0.zip
|
|
111
|
<span class="type">unzip</span> metacat-src-1.8.0.zip
|
|
112
|
<span class="type">cd</span> metacat-1.8.0
|
|
113
|
<span class="type">export</span> METACAT=`pwd`
|
|
114
|
</pre>
|
|
115
|
</blockquote>
|
|
116
|
</li>
|
|
117
|
|
|
118
|
<li>
|
|
119
|
<p>Build the Metacat Perl client library:</p>
|
|
120
|
<blockquote>
|
|
121
|
<pre><span class="type">cd</span> $METACAT/src/perl/Metacat
|
|
122
|
<span class="type">perl</span> Makefile.PL
|
|
123
|
<span class="type">sudo make</span>
|
|
124
|
<span class="type">sudo make install</span>
|
|
125
|
</pre>
|
|
126
|
</blockquote>
|
|
127
|
</li>
|
|
128
|
|
|
129
|
<li>
|
|
130
|
<p>Install the system libraries needed. On Redhat:
|
|
131
|
<blockquote>
|
|
132
|
<pre><span class="type">sudo yum install</span> gcc libxml2-devel libxslt-devel ant -y
|
|
133
|
</pre>
|
|
134
|
</blockquote>
|
|
135
|
|
|
136
|
On Debian:
|
|
137
|
<blockquote>
|
|
138
|
<pre>
|
|
139
|
<span class="type">sudo apt-get install</span> ant libappconfig-perl libxml-libxml-perl libxml-libxslt-perl \
|
|
140
|
libtemplate-perl libcgi-session-perl libdigest-sha1-perl libnet-ldap-perl \
|
|
141
|
libterm-readkey-perl libxml-dom-perl libsoap-lite-perl -y
|
|
142
|
</pre>
|
|
143
|
</blockquote>
|
|
144
|
You will need to install one package using cpan
|
|
145
|
<blockquote><pre><span class="type">sudo cpan</span> -i Config::Properties</pre></blockquote>
|
|
146
|
<blockquote><pre><span class="type">sudo cpan</span> -i scalar::util</pre></blockquote>
|
|
147
|
|
|
148
|
Debian users should skip ahead to step 6.
|
|
149
|
</p>
|
|
150
|
</li>
|
|
151
|
|
|
152
|
<li>
|
|
153
|
<p>Install CPAN, which allows us to install the Perl
|
|
154
|
dependencies for the registry and account management parts of
|
|
155
|
Metacat. If asked to manually configure cpan, type 'no' and
|
|
156
|
CPAN will be setup with its default values.</p>
|
|
157
|
<blockquote>
|
|
158
|
<pre><span class="type">sudo yum install</span> perl-CPAN
|
|
159
|
<span class="type">sudo cpan</span>
|
|
160
|
</pre>
|
|
161
|
</blockquote>
|
|
162
|
|
|
163
|
<p>You should now see a prompt which looks like:</p>
|
|
164
|
<blockquote>
|
|
165
|
<pre><span class="string">cpan></span>
|
|
166
|
</pre>
|
|
167
|
</blockquote>
|
|
168
|
|
|
169
|
<p>The rest of the commands will assume you're inside of
|
|
170
|
CPAN. Let's get the most recent version of the CPAN software.
|
|
171
|
Just press return after any prompts you recieve during this
|
|
172
|
process.</p>
|
|
173
|
<blockquote>
|
|
174
|
<pre>install Bundle::CPAN
|
|
175
|
reload cpan
|
|
176
|
</pre>
|
|
177
|
</blockquote>
|
|
178
|
</li>
|
|
179
|
|
|
180
|
<li>
|
|
181
|
<p>Install the required modules. Here we're installing an old
|
|
182
|
LibXSLT, as the current one requires a newer libxslt than is
|
|
183
|
available on Redhat 4 & 5. Again, just answer 'yes' to
|
|
184
|
any questions.</p>
|
|
185
|
<blockquote>
|
|
186
|
<pre>install AutoLoader
|
|
187
|
install CGI
|
|
188
|
install CGI::Session
|
|
189
|
install LWP::UserAgent
|
|
190
|
install Net::LDAP
|
|
191
|
install Template
|
|
192
|
install URI
|
|
193
|
install MSERGEANT/XML-LibXSLT-1.58.tar.gz
|
|
194
|
install Digest::SHA1
|
|
195
|
</pre>
|
|
196
|
</blockquote>
|
|
197
|
</li>
|
|
198
|
|
|
199
|
<li>
|
|
200
|
<p>Double check that Metacat's temporary folder, <code><span class="string">application.tempDir</span></code>, is writable by the apache user, usually <code><span class="string">www-data</span></code> or <code><span class="string">apache</span></code>.
|
|
201
|
<li>
|
|
202
|
<p>Now visit the resulting URL:</p>
|
|
203
|
<blockquote>
|
|
204
|
<pre>http://localhost/knb/cgi-bin/register-dataset.cgi?cfg=nceas
|
|
205
|
</pre>
|
|
206
|
</blockquote>
|
|
207
|
|
|
208
|
<p>If everything worked correctly, you should see a page like
|
|
209
|
this: <img src="images/registry-login.jpg" alt=
|
|
210
|
"Registry Login Page" /></p>
|
|
211
|
</li>
|
|
212
|
</ol>
|
|
213
|
|
|
214
|
<h2 id="installing-the-nceas-registry">Installing the NCEAS
|
|
215
|
Registry</h2>
|
|
216
|
|
|
217
|
<p>These are special instructions required for the NCEAS skin to
|
|
218
|
get a current projects list from the AdminDB, and can safely be
|
|
219
|
ignored in all other uses.</p>
|
|
220
|
|
|
221
|
<ol class="decimal">
|
|
222
|
<li>
|
|
223
|
<p>Download and install the Oracle Instant Client RPMs. These
|
|
224
|
can be obtained from the <a href=
|
|
225
|
"http://www.oracle.com/technology/software/tech/oci/instantclient/htdocs/linuxsoft.html">
|
|
226
|
oracle website</a>.</p>
|
|
227
|
<blockquote>
|
|
228
|
<pre><span class="type">rpm -i</span> oracle-instantclient-basic-10.2.0.3-1.i386.rpm
|
|
229
|
<span class="type">rpm -i</span> oracle-instantclient-devel-10.2.0.3-1.i386.rpm
|
|
230
|
<span class="type">rpm -i</span> oracle-instantclient-sqlplus-10.2.0.3-1.i386.rpm
|
|
231
|
</pre>
|
|
232
|
</blockquote>
|
|
233
|
</li>
|
|
234
|
|
|
235
|
<li>
|
|
236
|
<p>Next, we'll need an <pre>tnsnames.ora</pre> file for
|
|
237
|
Oracle to locate the server we're connecting to. In this
|
|
238
|
example, we'll copy it from a remote location:</p>
|
|
239
|
<blockquote>
|
|
240
|
<pre><span class="type">mkdir -p</span> /usr/lib/oracle/10.2.0.3/network/admin/ && <span class="type">cd !$</span>
|
|
241
|
<span class="type">scp</span> walbridge@knb.ecoinformatics.org:/usr/lib/oracle/10.1.0.4/network/admin/tnsnames.ora .
|
|
242
|
</pre>
|
|
243
|
</blockquote>
|
|
244
|
</li>
|
|
245
|
|
|
246
|
<li>
|
|
247
|
<p>The AdminDB is accessed via Perl, so install the needed
|
|
248
|
Oracle driver using CPAN:</p>
|
|
249
|
<blockquote>
|
|
250
|
<pre>cpan
|
|
251
|
install DBI
|
|
252
|
install DBD::Oracle
|
|
253
|
</pre>
|
|
254
|
</blockquote>
|
|
255
|
</li>
|
|
256
|
|
|
257
|
<li>
|
|
258
|
<p>Now we can install the AdminDB module itself:</p>
|
|
259
|
<blockquote>
|
|
260
|
<pre>mkdir -p ~/projects/admindb && cd !$
|
|
261
|
export CVSROOT=:ext:walbridge@cvs.nceas.ucsb.edu:/cvsnceas
|
|
262
|
cvs co admindb
|
|
263
|
cd admindb/perl/NCEAS/AdminDB
|
|
264
|
perl Makefile.PL
|
|
265
|
make
|
|
266
|
sudo make install
|
|
267
|
</pre>
|
|
268
|
</blockquote>
|
|
269
|
</li>
|
|
270
|
|
|
271
|
<li>
|
|
272
|
<p>Finally, set the correct properties in the
|
|
273
|
<pre>nceas.cfg</pre> file:</p>
|
|
274
|
<blockquote>
|
|
275
|
<pre>nceas_db = //hyperion.nceas.ucsb.edu:1521/nceasp.nceas.ucsb.edu
|
|
276
|
nceas_db_user = admowner
|
|
277
|
nceas_db_password = NCEAS_DB_READ_PASSWORD_HERE
|
|
278
|
</pre>
|
|
279
|
</blockquote>
|
|
280
|
</li>
|
|
281
|
|
|
282
|
<li>
|
|
283
|
<p>A quick check of <pre>register-dataset.cgi</pre> should
|
|
284
|
now show a complete list of projects: <img src=
|
|
285
|
"images/registry-nceas-projects.png" alt=
|
|
286
|
"NCEAS Project list" /></p>
|
|
287
|
</li>
|
|
288
|
</ol>
|
|
289
|
|
|
290
|
<h2 id="notes">Notes</h2>
|
|
291
|
|
|
292
|
<p>Redhat based, tested on Centos 5</p>
|
|
293
|
|
|
294
|
<p>Debian based, tested on Ubuntu 8.04</p>
|
|
295
|
</body>
|
|
296
|
</html>
|
