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Revision 107

updated javadoc documentation

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docs/help-doc.html
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: API Help
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Serialized Form
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<H3>
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dbt</H3>
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<PRE>
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<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A> <B>dbt</B></PRE>
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<DL>
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</DL>
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<HR>
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<H3>
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defaultdatapath</H3>
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<PRE>
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java.lang.String <B>defaultdatapath</B></PRE>
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<DL>
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</DL>
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<HR>
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<H3>
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defaultDB</H3>
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<PRE>
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java.lang.String <B>defaultDB</B></PRE>
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<DL>
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</DL>
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<HR>
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<H3>
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docreader</H3>
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<PRE>
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<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A> <B>docreader</B></PRE>
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<HR>
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<H3>
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executescript</H3>
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<PRE>
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java.lang.String <B>executescript</B></PRE>
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</DL>
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<HR>
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<H3>
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options</H3>
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<PRE>
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java.util.PropertyResourceBundle <B>options</B></PRE>
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<DL>
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</DL>
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<HR>
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<H3>
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password</H3>
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<PRE>
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java.lang.String <B>password</B></PRE>
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<DL>
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</DL>
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<HR>
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<H3>
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queryobj</H3>
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<PRE>
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<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A> <B>queryobj</B></PRE>
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<DL>
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</DL>
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<HR>
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resultStyleURL</H3>
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<PRE>
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java.lang.String <B>resultStyleURL</B></PRE>
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<DL>
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</DL>
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<HR>
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<H3>
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user</H3>
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<PRE>
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java.lang.String <B>user</B></PRE>
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<DL>
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</DL>
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<HR>
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<H3>
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xmlcatalogfile</H3>
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<PRE>
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java.lang.String <B>xmlcatalogfile</B></PRE>
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<DL>
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</DL>
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<P>
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<HR>
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docs/index-all.html
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<TITLE>
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: Index
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<!-- =========== END OF NAVBAR =========== -->
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<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_O_">O</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_W_">W</A> <HR>
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<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_P_">P</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <A HREF="#_X_">X</A> <HR>
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<A NAME="_A_"><!-- --></A><H2>
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<B>A</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html"><B>BasicElement</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>.<DD>A Class that represents an XML element and its contents<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#BasicElement()"><B>BasicElement()</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Construct a Basic Element
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#BasicElement(long, java.lang.String, long)"><B>BasicElement(long, String, long)</B></A> - 
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#BasicElement(long, java.lang.String, long, int)"><B>BasicElement(long, String, long, int)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Construct a Basic Element
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#BasicElement(java.lang.String, long)"><B>BasicElement(String, long)</B></A> - 
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#BasicElement(java.lang.String, long, int)"><B>BasicElement(String, long, int)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Construct a Basic Element
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</DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#characters(char[], int, int)"><B>characters(char[], int, int)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called for each XML text node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#comment(java.lang.String)"><B>comment(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler called once for each comment found: 
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 node that comment may occur before or after the root element.
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</DL>
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<HR>
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<A NAME="_D_"><!-- --></A><H2>
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<B>D</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html"><B>DBDTDHandler</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>.<DD>A database aware Class implementing DTDHandler interface for the SAX parser to
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 call when processing the XML stream and intercepting notations and unparsed entities<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html#DBDTDHandler(java.sql.Connection)"><B>DBDTDHandler(Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>
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<DD>Construct an instance of the DBDTDHandler clas
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<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html"><B>DBEntityResolver</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A>.<DD>A database aware Class implementing EntityResolver interface for the SAX parser to
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 call when processing the XML stream and intercepting any external entities
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 (including the external DTD subset and external parameter entities, if any) before including them.<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html#DBEntityResolver(java.sql.Connection)"><B>DBEntityResolver(Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A>
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<DD>Construct an instance of the DBEntityResolver clas
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#dbg(int)"><B>dbg(int)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html"><B>DBReader</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>.<DD>A Class that creates an XML text document
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 from a query to a relational DB containing a DOM representation<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#DBReader(java.sql.Connection)"><B>DBReader(Connection)</B></A> - 
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 from a query to a relational DB containing a DOM representation<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html"><B>DBReader.DoctypeInfo</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>.<DD>A utility class that encapsulates document type information<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#DBReader.DoctypeInfo(edu.ucsb.nceas.metacat.DBReader, java.lang.String, java.lang.String, java.lang.String)"><B>DBReader.DoctypeInfo(DBReader, String, String, String)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>Constructor
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#DBReader(java.sql.Connection)"><B>DBReader(Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>construct a DBReader instance.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html"><B>DBSAXDocument</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>.<DD>A Class that writes an XML document main data to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#DBSAXDocument(java.sql.Connection, long, java.lang.String, java.lang.String)"><B>DBSAXDocument(Connection, long, String, String)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
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<DD>Construct a new document instance
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html"><B>DBSAXElement</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html">DBSAXElement</A>.<DD>A Class that represents an XML element and its contents and
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 can write its own representation to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html#DBSAXElement(java.sql.Connection, java.lang.String, long)"><B>DBSAXElement(Connection, String, long)</B></A> - 
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 can write its own representation to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html#DBSAXElement(java.sql.Connection, java.lang.String, long, int)"><B>DBSAXElement(Connection, String, long, int)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html">DBSAXElement</A>
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<DD>Construct a new element instance
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html"><B>DBSAXHandler</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>.<DD>A database aware Class implementing callback bethods for the SAX parser to
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<DD>construct an instance of the DBSimpleQuery class 
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html"><B>DBTransform</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>.<DD>A Class that transforms XML documents utitlizing XSL style sheets<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#DBTransform(java.sql.Connection)"><B>DBTransform(Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
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<DD>construct a DBTransform instance.
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#doGet(javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)"><B>doGet(HttpServletRequest, HttpServletResponse)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
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<DD>Handle "GET" method requests from HTTP clients
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<A NAME="_E_"><!-- --></A><H2>
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<B>E</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/package-summary.html"><B>edu.ucsb.nceas.metacat</B></A> - package edu.ucsb.nceas.metacat<DD>&nbsp;<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endElement(oracle.xml.parser.v2.NSName)"><B>endElement(NSName)</B></A> - 
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<DT><A HREF="edu/ucsb/nceas/metacat/package-summary.html"><B>edu.ucsb.nceas.metacat</B></A> - package edu.ucsb.nceas.metacat<DD>&nbsp;<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endDoctype()"><B>endDoctype()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of end of DTD 
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 All events in DTDHandler about all unparsed entities and the event in EntityResolver for the DTD file declaration
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 appear between setDoctype and endDoctype.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endDocument()"><B>endDocument()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of end of the document
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endElement(oracle.xml.parser.v2.NSName)"><B>endElement(NSName)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called at the end of each XML element
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</DL>
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<HR>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html#fileToURL(java.io.File)"><B>fileToURL(File)</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html">DBSAXWriter</A>
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<DD>Utility method to convert a file handle into a URL
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#findRootNodes(java.lang.String)"><B>findRootNodes(String)</B></A> - 
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#findDocuments(java.lang.String)"><B>findDocuments(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
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<DD>routine to search the elements and attributes looking to match query
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</DL>
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<A NAME="_G_"><!-- --></A><H2>
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<B>G</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html"><B>GenericXMLValidate</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>.<DD>Name: GenericXMLValidate.java
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       Purpose: A Class that validates XML documents
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 			   This class is designed to be 'parser independent
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    			   i.e.<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#GenericXMLValidate(org.xml.sax.Parser)"><B>GenericXMLValidate(Parser)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#GenericXMLValidate(org.xml.sax.Parser, java.lang.String)"><B>GenericXMLValidate(Parser, String)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#getAttribute(java.lang.String)"><B>getAttribute(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Get an attribute value by name
......
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#getContent()"><B>getContent()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Get the content of the element
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDocname()"><B>getDocname()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>get the document name
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDoctype()"><B>getDoctype()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>get the document type
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getDoctypeInfo(long)"><B>getDoctypeInfo(long)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>Look up the document type information from the database
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#getElementID()"><B>getElementID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Get the id of this element
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#getNodeIndex()"><B>getNodeIndex()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Get nodeIndex of the element
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#getParentID()"><B>getParentID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Get the parent id of this element
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getRootNode(long)"><B>getRootNode(long)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>Get the root node id for an XML document given a document id
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getSystemID()"><B>getSystemID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>get the system identifier
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#getSystemId(java.lang.String, java.lang.String, java.lang.String)"><B>getSystemId(String, String, String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
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<DD>Lookup a stylesheet reference from the db catalog
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#getTagName()"><B>getTagName()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>Get the name of this element
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getTitle()"><B>getTitle()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
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<DD>Get the document title
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</DL>
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<HR>
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<A NAME="_I_"><!-- --></A><H2>
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called for each XML text node that is Ignorable
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 white space
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#incChildNum()"><B>incChildNum()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
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<DD>increase childNum when new child for the element is created
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#init(javax.servlet.ServletConfig)"><B>init(ServletConfig)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
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<DD>Initialize the servlet by creating appropriate database connections
......
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<A NAME="_M_"><!-- --></A><H2>
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<B>M</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
243
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
244
<DD>the main routine used to test the transform utility.
173 245
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
174 246
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
175 247
<DD>main routine used for testing.
176 248
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
177 249
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html">DBSAXWriter</A>
178 250
<DD>the main routine used to test the DBSAXWriter utility.
251
<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
252
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A>
253
<DD>&nbsp;
179 254
<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
180 255
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
181 256
<DD>the main routine used to test the DBSimpleQuery utility.
......
184 259
 <DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#MetaCatServlet()"><B>MetaCatServlet()</B></A> - 
185 260
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
186 261
<DD>&nbsp;
187
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html"><B>MetaCatUtil</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>.<DD>A suite of utility classes for the metadata catalog server<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#MetaCatUtil()"><B>MetaCatUtil()</B></A> - 
188
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
189
<DD>&nbsp;
190 262
</DL>
191 263
<HR>
192
<A NAME="_O_"><!-- --></A><H2>
193
<B>O</B></H2>
264
<A NAME="_N_"><!-- --></A><H2>
265
<B>N</B></H2>
194 266
<DL>
195
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#openDBConnection(java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>openDBConnection(String, String, String, String)</B></A> - 
196
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
197
<DD>Utility method to establish a JDBC database connection
267
<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html#notationDecl(java.lang.String, java.lang.String, java.lang.String)"><B>notationDecl(String, String, String)</B></A> - 
268
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>
269
<DD>Notation declarations are not signaled
198 270
</DL>
199 271
<HR>
272
<A NAME="_P_"><!-- --></A><H2>
273
<B>P</B></H2>
274
<DL>
275
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#processingInstruction(java.lang.String, java.lang.String)"><B>processingInstruction(String, String)</B></A> - 
276
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
277
<DD>&nbsp;
278
</DL>
279
<HR>
200 280
<A NAME="_R_"><!-- --></A><H2>
201 281
<B>R</B></H2>
202 282
<DL>
......
214 294
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
215 295
<DD>Create an XML document from the database starting with the element 
216 296
 having element_id nodeid
297
<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html#resolveEntity(java.lang.String, java.lang.String)"><B>resolveEntity(String, String)</B></A> - 
298
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A>
299
<DD>The Parser call this method before opening any external entity 
300
 except the top-level document entity (including the external DTD subset,
301
 external entities referenced within the DTD, and external entities referenced 
302
 within the document element)
303
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#returnErrors()"><B>returnErrors()</B></A> - 
304
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>
305
<DD>&nbsp;
217 306
</DL>
218 307
<HR>
219 308
<A NAME="_S_"><!-- --></A><H2>
......
225 314
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html#setAttribute(java.lang.String, java.lang.String)"><B>setAttribute(String, String)</B></A> - 
226 315
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html">DBSAXElement</A>
227 316
<DD>Add a new attribute to this element, or set its value
317
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#setDoctype(oracle.xml.parser.v2.DTD)"><B>setDoctype(DTD)</B></A> - 
318
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
319
<DD>SAX Handler that receives notification of DTD.
228 320
<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#setElementID(long)"><B>setElementID(long)</B></A> - 
229 321
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
230 322
<DD>Set the id of this element
......
234 326
<DT><A HREF="edu/ucsb/nceas/metacat/BasicElement.html#setTagName(java.lang.String)"><B>setTagName(String)</B></A> - 
235 327
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html">BasicElement</A>
236 328
<DD>Set the tagname of this element
329
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#setTitle(java.lang.String)"><B>setTitle(String)</B></A> - 
330
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
331
<DD>Set the document title
332
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#setTitleFromChildElement()"><B>setTitleFromChildElement()</B></A> - 
333
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
334
<DD>Look up the title of the first child element named "title"
335
 and record it as the document title
336
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startDocument()"><B>startDocument()</B></A> - 
337
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
338
<DD>SAX Handler that receives notification of beginning of the document
237 339
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startElement(oracle.xml.parser.v2.NSName, oracle.xml.parser.v2.SAXAttrList)"><B>startElement(NSName, SAXAttrList)</B></A> - 
238 340
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
239 341
<DD>SAX Handler that is called at the start of each XML element
......
249 351
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ReaderElement.html">ReaderElement</A>
250 352
<DD>String representation for display purposes (recursively descends through
251 353
 children to create an XML subtree)
354
<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#transformXMLDocument(java.lang.String, java.lang.String, java.lang.String, java.io.PrintWriter)"><B>transformXMLDocument(String, String, String, PrintWriter)</B></A> - 
355
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
356
<DD>Transform an XML document using the stylesheet reference from the db
252 357
</DL>
253 358
<HR>
359
<A NAME="_U_"><!-- --></A><H2>
360
<B>U</B></H2>
361
<DL>
362
<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html#unparsedEntityDecl(java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>unparsedEntityDecl(String, String, String, String)</B></A> - 
363
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>
364
<DD>All are reported after startDocument and before first startElement event
365
</DL>
366
<HR>
367
<A NAME="_V_"><!-- --></A><H2>
368
<B>V</B></H2>
369
<DL>
370
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#validate(java.lang.String)"><B>validate(String)</B></A> - 
371
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>
372
<DD>&nbsp;
373
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#validateString(java.lang.String)"><B>validateString(String)</B></A> - 
374
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>
375
<DD>&nbsp;
376
<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html#validating"><B>validating</B></A> - 
377
Variable in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A>
378
<DD>&nbsp;
379
</DL>
380
<HR>
254 381
<A NAME="_W_"><!-- --></A><H2>
255 382
<B>W</B></H2>
256 383
<DL>
......
259 386
<DD>Write the element content to the db connection
260 387
</DL>
261 388
<HR>
262
<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_O_">O</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_W_">W</A> 
389
<A NAME="_X_"><!-- --></A><H2>
390
<B>X</B></H2>
391
<DL>
392
<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html"><B>XMLValidate</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A>.<DD>XMLValidate.java
393
         Purpose: A Class that validates XML documents
394
   			   This class is uses a specific parser
395
 				and calls the GenericXMLValidate class
396
                 to do the actual validation
397
       Copyright: 2000 Regents of the University of California and the
398
                  National Center for Ecological Analysis and Synthesis
399
                  April 28, 2000<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html#XMLValidate(java.lang.String)"><B>XMLValidate(String)</B></A> - 
400
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A>
401
<DD>&nbsp;
402
</DL>
403
<HR>
404
<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_P_">P</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <A HREF="#_X_">X</A> 
263 405
<!-- ========== START OF NAVBAR ========== -->
264 406
<A NAME="navbar_bottom"><!-- --></A>
265 407
<TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0">
docs/allclasses-frame.html
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<TITLE>
7 7
All Classes
8 8
</TITLE>
......
17 17
<TR>
18 18
<TD NOWRAP><FONT CLASS="FrameItemFont"><A HREF="edu/ucsb/nceas/metacat/BasicElement.html" TARGET="classFrame">BasicElement</A>
19 19
<BR>
20
<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html" TARGET="classFrame">DBDTDHandler</A>
21
<BR>
22
<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html" TARGET="classFrame">DBEntityResolver</A>
23
<BR>
20 24
<A HREF="edu/ucsb/nceas/metacat/DBReader.html" TARGET="classFrame">DBReader</A>
21 25
<BR>
26
<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html" TARGET="classFrame">DBSAXDocument</A>
27
<BR>
22 28
<A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html" TARGET="classFrame">DBSAXElement</A>
23 29
<BR>
24 30
<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html" TARGET="classFrame">DBSAXHandler</A>
......
27 33
<BR>
28 34
<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html" TARGET="classFrame">DBSimpleQuery</A>
29 35
<BR>
36
<A HREF="edu/ucsb/nceas/metacat/DBTransform.html" TARGET="classFrame">DBTransform</A>
37
<BR>
38
<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html" TARGET="classFrame">GenericXMLValidate</A>
39
<BR>
30 40
<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html" TARGET="classFrame">MetaCatServlet</A>
31 41
<BR>
32
<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html" TARGET="classFrame">MetaCatUtil</A>
33
<BR>
34 42
<A HREF="edu/ucsb/nceas/metacat/ReaderElement.html" TARGET="classFrame">ReaderElement</A>
35 43
<BR>
44
<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html" TARGET="classFrame">XMLValidate</A>
45
<BR>
36 46
</FONT></TD>
37 47
</TR>
38 48
</TABLE>
docs/packages.html
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<HTML>
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<HEAD>
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<!-- Generated by javadoc on Tue Apr 18 13:19:07 AKDT 2000 -->
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<!-- Generated by javadoc on Sat May 20 14:25:40 AKDT 2000 -->
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<TITLE>
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</TITLE>
docs/overview-tree.html
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<!-- Generated by javadoc on Tue Apr 18 13:19:07 AKDT 2000 -->
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<!-- Generated by javadoc on Sat May 20 14:25:39 AKDT 2000 -->
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<TITLE>
7 7
: Class Hierarchy
8 8
</TITLE>
......
58 58
<LI TYPE="circle">class java.lang.Object<UL>
59 59
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicElement.html"><B>BasicElement</B></A><UL>
60 60
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXElement.html"><B>DBSAXElement</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ReaderElement.html"><B>ReaderElement</B></A></UL>
61
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html"><B>DBReader</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html"><B>DBSAXWriter</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html"><B>DBSimpleQuery</B></A><LI TYPE="circle">class javax.servlet.GenericServlet (implements java.io.Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig)
61
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html"><B>DBDTDHandler</B></A> (implements org.xml.sax.DTDHandler)
62
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html"><B>DBEntityResolver</B></A> (implements org.xml.sax.EntityResolver)
63
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html"><B>DBReader</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html"><B>DBReader.DoctypeInfo</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html"><B>DBSAXDocument</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html"><B>DBSAXWriter</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html"><B>DBSimpleQuery</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html"><B>DBTransform</B></A><LI TYPE="circle">class javax.servlet.GenericServlet (implements java.io.Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig)
62 64
<UL>
63 65
<LI TYPE="circle">class javax.servlet.http.HttpServlet (implements java.io.Serializable)
64 66
<UL>
65 67
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html"><B>MetaCatServlet</B></A></UL>
66 68
</UL>
67
<LI TYPE="circle">class org.xml.sax.HandlerBase (implements org.xml.sax.DocumentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
69
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html"><B>GenericXMLValidate</B></A><LI TYPE="circle">class org.xml.sax.HandlerBase (implements org.xml.sax.DocumentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
68 70
<UL>
69 71
<LI TYPE="circle">class oracle.xml.parser.v2.DefaultXMLDocumentHandler (implements oracle.xml.parser.v2.XMLDocumentHandler)
70 72
<UL>
71 73
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html"><B>DBSAXHandler</B></A></UL>
72 74
</UL>
73
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html"><B>MetaCatUtil</B></A></UL>
75
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html"><B>XMLValidate</B></A></UL>
74 76
</UL>
75 77
<HR>
76 78

  
docs/index.html
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<HEAD>
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Generated Documentation (Untitled)
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<HEAD>
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: Deprecated List
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</TITLE>
docs/edu/ucsb/nceas/metacat/ReaderElement.html
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: Class  ReaderElement
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<TR>
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<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
37
&nbsp;<A HREF="../../../../edu/ucsb/nceas/metacat/MetaCatUtil.html"><B>PREV CLASS</B></A>&nbsp;
38
&nbsp;NEXT CLASS</FONT></TD>
37
&nbsp;<A HREF="../../../../edu/ucsb/nceas/metacat/MetaCatServlet.html"><B>PREV CLASS</B></A>&nbsp;
38
&nbsp;<A HREF="../../../../edu/ucsb/nceas/metacat/XMLValidate.html"><B>NEXT CLASS</B></A></FONT></TD>
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<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
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  <A HREF="../../../../index.html" TARGET="_top"><B>FRAMES</B></A>  &nbsp;
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&nbsp;<A HREF="ReaderElement.html" TARGET="_top"><B>NO FRAMES</B></A></FONT></TD>
......
143 143
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#getAttributes()">getAttributes</A>, 
144 144
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#getContent()">getContent</A>, 
145 145
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#getElementID()">getElementID</A>, 
146
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#getNodeIndex()">getNodeIndex</A>, 
146 147
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#getParentID()">getParentID</A>, 
147 148
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#getTagName()">getTagName</A>, 
149
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#incChildNum()">incChildNum</A>, 
148 150
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#setAttribute(java.lang.String, java.lang.String)">setAttribute</A>, 
149 151
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#setElementID(long)">setElementID</A>, 
150 152
<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html#setParentID(long)">setParentID</A>, 
......
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<TR>
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docs/edu/ucsb/nceas/metacat/DBDTDHandler.html
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Class  DBDTDHandler</H2>
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<PRE>
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java.lang.Object
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  |
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  +--<B>edu.ucsb.nceas.metacat.DBDTDHandler</B>
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</PRE>
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<DT>public class <B>DBDTDHandler</B><DT>extends java.lang.Object<DT>implements org.xml.sax.DTDHandler</DL>
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<P>
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A database aware Class implementing DTDHandler interface for the SAX parser to
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 call when processing the XML stream and intercepting notations and unparsed entities
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<HR>
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<!-- ======== INNER CLASS SUMMARY ======== -->
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<B>Constructor Summary</B></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBDTDHandler.html#DBDTDHandler(java.sql.Connection)">DBDTDHandler</A></B>(java.sql.Connection&nbsp;conn)</CODE>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Construct an instance of the DBDTDHandler clas</TD>
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<CODE>&nbsp;void</CODE></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBDTDHandler.html#notationDecl(java.lang.String, java.lang.String, java.lang.String)">notationDecl</A></B>(java.lang.String&nbsp;name,
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             java.lang.String&nbsp;publicId,
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             java.lang.String&nbsp;systemId)</CODE>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Notation declarations are not signaled</TD>
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<CODE>&nbsp;void</CODE></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBDTDHandler.html#unparsedEntityDecl(java.lang.String, java.lang.String, java.lang.String, java.lang.String)">unparsedEntityDecl</A></B>(java.lang.String&nbsp;name,
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                   java.lang.String&nbsp;publicId,
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                   java.lang.String&nbsp;systemId,
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                   java.lang.String&nbsp;notationName)</CODE>
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<BR>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;All are reported after startDocument and before first startElement event</TD>
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<TD><B>Methods inherited from class java.lang.Object</B></TD>
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<TD><CODE>clone, 
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equals, 
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finalize, 
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notify, 
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notifyAll, 
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toString, 
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wait, 
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wait, 
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wait</CODE></TD>
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<B>Constructor Detail</B></FONT></TD>
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<A NAME="DBDTDHandler(java.sql.Connection)"><!-- --></A><H3>
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DBDTDHandler</H3>
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<PRE>
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public <B>DBDTDHandler</B>(java.sql.Connection&nbsp;conn)</PRE>
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<DL>
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<DD>Construct an instance of the DBDTDHandler clas<DD><DL>
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<DT><B>Parameters:</B><DD><CODE>conn</CODE> - the JDBC connection to which information is written</DL>
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<A NAME="notationDecl(java.lang.String, java.lang.String, java.lang.String)"><!-- --></A><H3>
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notationDecl</H3>
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<PRE>
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public void <B>notationDecl</B>(java.lang.String&nbsp;name,
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                         java.lang.String&nbsp;publicId,
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                         java.lang.String&nbsp;systemId)
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                  throws org.xml.sax.SAXException</PRE>
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<DL>
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<DD>Notation declarations are not signaled<DD><DL>
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<DT><B>Specified by: </B><DD>notationDecl in interface org.xml.sax.DTDHandler</DL>
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</DD>
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</DL>
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<HR>
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unparsedEntityDecl</H3>
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<PRE>
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public void <B>unparsedEntityDecl</B>(java.lang.String&nbsp;name,
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                               java.lang.String&nbsp;publicId,
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                               java.lang.String&nbsp;systemId,
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                               java.lang.String&nbsp;notationName)
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                        throws org.xml.sax.SAXException</PRE>
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<DL>
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<DD>All are reported after startDocument and before first startElement event<DD><DL>
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<DT><B>Specified by: </B><DD>unparsedEntityDecl in interface org.xml.sax.DTDHandler</DL>
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docs/edu/ucsb/nceas/metacat/DBTransform.html
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edu.ucsb.nceas.metacat</FONT>
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Class  DBTransform</H2>
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<PRE>
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java.lang.Object
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  |
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  +--<B>edu.ucsb.nceas.metacat.DBTransform</B>
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</PRE>
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<HR>
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<DL>
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<DT>public class <B>DBTransform</B><DT>extends java.lang.Object</DL>
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<P>
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A Class that transforms XML documents utitlizing XSL style sheets
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<P>
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<!-- ======== INNER CLASS SUMMARY ======== -->
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<B>Constructor Summary</B></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBTransform.html#DBTransform(java.sql.Connection)">DBTransform</A></B>(java.sql.Connection&nbsp;conn)</CODE>
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<BR>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;construct a DBTransform instance.</TD>
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<!-- ========== METHOD SUMMARY =========== -->
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<CODE>&nbsp;void</CODE></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBTransform.html#dbg(int)">dbg</A></B>(int&nbsp;position)</CODE>
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<CODE>&nbsp;java.lang.String</CODE></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBTransform.html#getSystemId(java.lang.String, java.lang.String, java.lang.String)">getSystemId</A></B>(java.lang.String&nbsp;objecttype,
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            java.lang.String&nbsp;sourcetype,
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            java.lang.String&nbsp;targettype)</CODE>
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<BR>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Lookup a stylesheet reference from the db catalog</TD>
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</TR>
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<TR BGCOLOR="white" CLASS="TableRowColor">
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<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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<CODE>static&nbsp;void</CODE></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBTransform.html#main(java.lang.String[])">main</A></B>(java.lang.String[]&nbsp;args)</CODE>
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<BR>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;the main routine used to test the transform utility.</TD>
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<TR BGCOLOR="white" CLASS="TableRowColor">
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<TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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<CODE>&nbsp;void</CODE></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBTransform.html#transformXMLDocument(java.lang.String, java.lang.String, java.lang.String, java.io.PrintWriter)">transformXMLDocument</A></B>(java.lang.String&nbsp;doc,
134
                     java.lang.String&nbsp;sourcetype,
135
                     java.lang.String&nbsp;targettype,
136
                     java.io.PrintWriter&nbsp;pw)</CODE>
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<BR>
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Transform an XML document using the stylesheet reference from the db</TD>
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</TR>
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</TABLE>
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&nbsp;<A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A>
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<TABLE BORDER="1" CELLPADDING="3" CELLSPACING="0" WIDTH="100%">
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<TD><B>Methods inherited from class java.lang.Object</B></TD>
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<TR BGCOLOR="white" CLASS="TableRowColor">
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<TD><CODE>clone, 
149
equals, 
150
finalize, 
151
getClass, 
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hashCode, 
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notify, 
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notifyAll, 
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toString, 
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wait, 
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wait, 
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wait</CODE></TD>
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<P>
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<!-- ============ FIELD DETAIL =========== -->
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<B>Constructor Detail</B></FONT></TD>
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<A NAME="DBTransform(java.sql.Connection)"><!-- --></A><H3>
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DBTransform</H3>
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<PRE>
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public <B>DBTransform</B>(java.sql.Connection&nbsp;conn)
181
            throws java.io.IOException,
182
                   java.sql.SQLException,
183
                   java.lang.ClassNotFoundException</PRE>
184
<DL>
185
<DD>construct a DBTransform instance.
186

  
187
 Generally, one calls transformXMLDocument() after constructing the instance<DD><DL>
188
<DT><B>Parameters:</B><DD><CODE>conn</CODE> - the database connection from which to lookup the public ids</DL>
189
</DD>
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</DL>
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<!-- ============ METHOD DETAIL ========== -->
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<B>Method Detail</B></FONT></TD>
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<A NAME="transformXMLDocument(java.lang.String, java.lang.String, java.lang.String, java.io.PrintWriter)"><!-- --></A><H3>
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transformXMLDocument</H3>
204
<PRE>
205
public void <B>transformXMLDocument</B>(java.lang.String&nbsp;doc,
206
                                 java.lang.String&nbsp;sourcetype,
207
                                 java.lang.String&nbsp;targettype,
208
                                 java.io.PrintWriter&nbsp;pw)</PRE>
209
<DL>
210
<DD>Transform an XML document using the stylesheet reference from the db<DD><DL>
211
<DT><B>Parameters:</B><DD><CODE>doc</CODE> - the document to be transformed<DD><CODE>sourcetype</CODE> - the document type of the source<DD><CODE>targettype</CODE> - the target document type</DL>
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</DD>
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<HR>
215

  
216
<A NAME="getSystemId(java.lang.String, java.lang.String, java.lang.String)"><!-- --></A><H3>
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getSystemId</H3>
218
<PRE>
219
public java.lang.String <B>getSystemId</B>(java.lang.String&nbsp;objecttype,
220
                                    java.lang.String&nbsp;sourcetype,
221
                                    java.lang.String&nbsp;targettype)</PRE>
222
<DL>
223
<DD>Lookup a stylesheet reference from the db catalog<DD><DL>
224
<DT><B>Parameters:</B><DD><CODE>objecttype</CODE> - the type of the object we want to retrieve<DD><CODE>sourcetype</CODE> - the document type of the source<DD><CODE>targettype</CODE> - the document type of the target</DL>
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</DD>
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</DL>
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<HR>
228

  
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<A NAME="main(java.lang.String[])"><!-- --></A><H3>
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main</H3>
231
<PRE>
232
public static void <B>main</B>(java.lang.String[]&nbsp;args)</PRE>
233
<DL>
234
<DD>the main routine used to test the transform utility.
235

  
236
 Usage: java transform <user> <password> [dbstring]<DD><DL>
237
<DT><B>Parameters:</B><DD><CODE>user</CODE> - the username to use for the database connection<DD><CODE>password</CODE> - the password to use for the database connection<DD><CODE>dbstring</CODE> - the connection info to use for the database connection</DL>
238
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<HR>
241

  
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<A NAME="dbg(int)"><!-- --></A><H3>
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dbg</H3>
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<PRE>
245
public void <B>dbg</B>(int&nbsp;position)</PRE>
246
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249
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docs/edu/ucsb/nceas/metacat/MetaCatServlet.html
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: Class  MetaCatServlet
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82 82
 docid=34 -- display the document with the document ID number 34<br>
83 83
 action=putdocument -- load an XML document into the database store<br>
84 84
 doctext -- XML text ofthe document to load into the database<br>
85
 query -- actual query text (to go with 'action=query')<br>
86
 action=validate -- vallidate the xml contained in validatetext<br>
87
 valtext -- XML text to be validated
88
 action=getdatadoc -- retreive a stored datadocument  //DFH
89
 datadoc -- data document name (id)                   //DFH
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<P>
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<DL>
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<DT><B>See Also: </B><DD><A HREF="../../../../serialized-form.html#edu.ucsb.nceas.metacat.MetaCatServlet">Serialized Form</A></DL>
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23
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<A HREF="DBEntityResolver.html" TARGET="classFrame">DBEntityResolver</A>
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<A HREF="DBReader.html" TARGET="classFrame">DBReader</A>
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28
<A HREF="DBSAXDocument.html" TARGET="classFrame">DBSAXDocument</A>
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<A HREF="DBSAXElement.html" TARGET="classFrame">DBSAXElement</A>
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<A HREF="DBSAXHandler.html" TARGET="classFrame">DBSAXHandler</A>
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<A HREF="DBSimpleQuery.html" TARGET="classFrame">DBSimpleQuery</A>
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<A HREF="DBTransform.html" TARGET="classFrame">DBTransform</A>
39
<BR>
40
<A HREF="GenericXMLValidate.html" TARGET="classFrame">GenericXMLValidate</A>
41
<BR>
32 42
<A HREF="MetaCatServlet.html" TARGET="classFrame">MetaCatServlet</A>
33 43
<BR>
34
<A HREF="MetaCatUtil.html" TARGET="classFrame">MetaCatUtil</A>
44
<A HREF="ReaderElement.html" TARGET="classFrame">ReaderElement</A>
35 45
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36
<A HREF="ReaderElement.html" TARGET="classFrame">ReaderElement</A></FONT></TD>
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: Class  DBSimpleQuery
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<CODE>&nbsp;java.util.Hashtable</CODE></FONT></TD>
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<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBSimpleQuery.html#findRootNodes(java.lang.String)">findRootNodes</A></B>(java.lang.String&nbsp;query)</CODE>
111
<TD><CODE><B><A HREF="../../../../edu/ucsb/nceas/metacat/DBSimpleQuery.html#findDocuments(java.lang.String)">findDocuments</A></B>(java.lang.String&nbsp;query)</CODE>
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<BR>
114 114
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;routine to search the elements and attributes looking to match query</TD>
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167 167
<DL>
168 168
<DD>construct an instance of the DBSimpleQuery class 
169 169

  
170
 <p>Generally, one would call the findRootNodes() routine after creating 
170
 <p>Generally, one would call the findDocuments() routine after creating 
171 171
 an instance to specify the search query</p><DD><DL>
172 172
<DT><B>Parameters:</B><DD><CODE>conn</CODE> - the JDBC connection that we use for the query</DL>
173 173
</DD>
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199
<A NAME="findRootNodes(java.lang.String)"><!-- --></A><H3>
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findRootNodes</H3>
199
<A NAME="findDocuments(java.lang.String)"><!-- --></A><H3>
200
findDocuments</H3>
201 201
<PRE>
202
public java.util.Hashtable <B>findRootNodes</B>(java.lang.String&nbsp;query)</PRE>
202
public java.util.Hashtable <B>findDocuments</B>(java.lang.String&nbsp;query)</PRE>
203 203
<DL>
204 204
<DD>routine to search the elements and attributes looking to match query<DD><DL>
205 205
<DT><B>Parameters:</B><DD><CODE>query</CODE> - the text to search for</DL>
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docs/edu/ucsb/nceas/metacat/package-summary.html
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<TD>A Class that represents an XML element and its contents</TD>
59 59
</TR>
60 60
<TR BGCOLOR="white" CLASS="TableRowColor">
61
<TD WIDTH="15%"><B><A HREF="DBDTDHandler.html">DBDTDHandler</A></B></TD>
62
<TD>A database aware Class implementing DTDHandler interface for the SAX parser to
63
 call when processing the XML stream and intercepting notations and unparsed entities</TD>
64
</TR>
65
<TR BGCOLOR="white" CLASS="TableRowColor">
66
<TD WIDTH="15%"><B><A HREF="DBEntityResolver.html">DBEntityResolver</A></B></TD>
67
<TD>A database aware Class implementing EntityResolver interface for the SAX parser to
68
 call when processing the XML stream and intercepting any external entities
69
 (including the external DTD subset and external parameter entities, if any) before including them.</TD>
70
</TR>
71
<TR BGCOLOR="white" CLASS="TableRowColor">
61 72
<TD WIDTH="15%"><B><A HREF="DBReader.html">DBReader</A></B></TD>
62 73
<TD>A Class that creates an XML text document
63 74
 from a query to a relational DB containing a DOM representation</TD>
64 75
</TR>
65 76
<TR BGCOLOR="white" CLASS="TableRowColor">
77
<TD WIDTH="15%"><B><A HREF="DBSAXDocument.html">DBSAXDocument</A></B></TD>
78
<TD>A Class that writes an XML document main data to a database connection</TD>
79
</TR>
80
<TR BGCOLOR="white" CLASS="TableRowColor">
66 81
<TD WIDTH="15%"><B><A HREF="DBSAXElement.html">DBSAXElement</A></B></TD>
67 82
<TD>A Class that represents an XML element and its contents and
68 83
 can write its own representation to a database connection</TD>
......
83 98
 have free text matches to the query string.</TD>
84 99
</TR>
85 100
<TR BGCOLOR="white" CLASS="TableRowColor">
101
<TD WIDTH="15%"><B><A HREF="DBTransform.html">DBTransform</A></B></TD>
102
<TD>A Class that transforms XML documents utitlizing XSL style sheets</TD>
103
</TR>
104
<TR BGCOLOR="white" CLASS="TableRowColor">
105
<TD WIDTH="15%"><B><A HREF="GenericXMLValidate.html">GenericXMLValidate</A></B></TD>
106
<TD>Name: GenericXMLValidate.java
107
       Purpose: A Class that validates XML documents
108
 			   This class is designed to be 'parser independent
109
    			   i.e.</TD>
110
</TR>
111
<TR BGCOLOR="white" CLASS="TableRowColor">
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<TD WIDTH="15%"><B><A HREF="MetaCatServlet.html">MetaCatServlet</A></B></TD>
87 113
<TD>A metadata catalog server implemented as a Java Servlet
88 114

  
89 115
 </TD>
90 116
</TR>
91 117
<TR BGCOLOR="white" CLASS="TableRowColor">
92
<TD WIDTH="15%"><B><A HREF="MetaCatUtil.html">MetaCatUtil</A></B></TD>
93
<TD>A suite of utility classes for the metadata catalog server</TD>
94
</TR>
95
<TR BGCOLOR="white" CLASS="TableRowColor">
96 118
<TD WIDTH="15%"><B><A HREF="ReaderElement.html">ReaderElement</A></B></TD>
97 119
<TD>A Class that represents an XML element and its contents,
98 120
 and can build itself from a database connection</TD>
99 121
</TR>
122
<TR BGCOLOR="white" CLASS="TableRowColor">
123
<TD WIDTH="15%"><B><A HREF="XMLValidate.html">XMLValidate</A></B></TD>
124
<TD>XMLValidate.java
125
         Purpose: A Class that validates XML documents
126
   			   This class is uses a specific parser
127
 				and calls the GenericXMLValidate class
128
                 to do the actual validation
129
       Copyright: 2000 Regents of the University of California and the
130
                  National Center for Ecological Analysis and Synthesis
131
                  April 28, 2000</TD>
132
</TR>
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</TABLE>
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&nbsp;
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docs/edu/ucsb/nceas/metacat/package-tree.html
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: edu.ucsb.nceas.metacat Class Hierarchy
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<LI TYPE="circle">class java.lang.Object<UL>
57 57
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/BasicElement.html"><B>BasicElement</B></A><UL>
58 58
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBSAXElement.html"><B>DBSAXElement</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/ReaderElement.html"><B>ReaderElement</B></A></UL>
59
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBReader.html"><B>DBReader</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBSAXWriter.html"><B>DBSAXWriter</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBSimpleQuery.html"><B>DBSimpleQuery</B></A><LI TYPE="circle">class javax.servlet.GenericServlet (implements java.io.Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig)
59
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBDTDHandler.html"><B>DBDTDHandler</B></A> (implements org.xml.sax.DTDHandler)
60
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBEntityResolver.html"><B>DBEntityResolver</B></A> (implements org.xml.sax.EntityResolver)
61
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBReader.html"><B>DBReader</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html"><B>DBReader.DoctypeInfo</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBSAXDocument.html"><B>DBSAXDocument</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBSAXWriter.html"><B>DBSAXWriter</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBSimpleQuery.html"><B>DBSimpleQuery</B></A><LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBTransform.html"><B>DBTransform</B></A><LI TYPE="circle">class javax.servlet.GenericServlet (implements java.io.Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig)
60 62
<UL>
61 63
<LI TYPE="circle">class javax.servlet.http.HttpServlet (implements java.io.Serializable)
62 64
<UL>
63 65
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/MetaCatServlet.html"><B>MetaCatServlet</B></A></UL>
64 66
</UL>
65
<LI TYPE="circle">class org.xml.sax.HandlerBase (implements org.xml.sax.DocumentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
67
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/GenericXMLValidate.html"><B>GenericXMLValidate</B></A><LI TYPE="circle">class org.xml.sax.HandlerBase (implements org.xml.sax.DocumentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
66 68
<UL>
67 69
<LI TYPE="circle">class oracle.xml.parser.v2.DefaultXMLDocumentHandler (implements oracle.xml.parser.v2.XMLDocumentHandler)
68 70
<UL>
69 71
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/DBSAXHandler.html"><B>DBSAXHandler</B></A></UL>
70 72
</UL>
71
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/MetaCatUtil.html"><B>MetaCatUtil</B></A></UL>
73
<LI TYPE="circle">class edu.ucsb.nceas.metacat.<A HREF="../../../../edu/ucsb/nceas/metacat/XMLValidate.html"><B>XMLValidate</B></A></UL>
72 74
</UL>
73 75
<HR>
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docs/edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html
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<TITLE>
7
: Class  DBReader.DoctypeInfo
8
</TITLE>
9
<LINK REL ="stylesheet" TYPE="text/css" HREF="../../../../stylesheet.css" TITLE="Style">
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