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metacat / src / edu / ucsb / nceas / metacat @ 6012

Name Size Revision Age Author Comment
  accesscontrol 5742 almost 10 years berkley fixed bug where comparisons didn't work because...
  admin 6012 over 9 years ben leinfelder add support for temporal element query in pathq...
  advancedsearch 5030 about 11 years daigle Change location of PropertyService to propertie...
  cart 5374 over 10 years berkley refactored the sessionService to use a correct ...
  client 5914 over 9 years ben leinfelder remove httpclient 3.1 and custom-built httpclie...
  clientview 5914 over 9 years ben leinfelder remove httpclient 3.1 and custom-built httpclie...
  database 5944 over 9 years berkley fixed replication bug where systemmetadata was ...
  dataone 6001 over 9 years Chris Jones DocumentImpl.delete() now throws finer grained ...
  dataquery 6000 over 9 years ben leinfelder refactor the names of these Data Manager implem...
  harvesterClient 5463 about 10 years ben leinfelder do not read from the inputstream before passing...
  lsid 5760 almost 10 years ben leinfelder use detected document encoding or Metacat's def...
  oaipmh 5649 almost 10 years Duane Costa Bug fix for #5241: OAI-PMH: ListRecords verb re...
  plugin 5518 about 10 years ben leinfelder include MetacatHandlerPlugin interface so that ...
  properties 5846 over 9 years ben leinfelder add boolean return to indicate whether or not a...
  replication 6001 over 9 years Chris Jones DocumentImpl.delete() now throws finer grained ...
  restservice 5955 over 9 years berkley added file extension for txt or csv files
  scheduler 5139 almost 11 years daigle Fix errors in workflow scheduler unit test
  service 5941 over 9 years Jing Tao Add a static method to get base url base on a s...
  shared 5108 almost 11 years daigle move dbconnection object out of base class and ...
  spatial 5915 over 9 years Matt Jones Cleanup harvester exceptions and generics.
  stringclient 1818 about 17 years Jing Tao Fixed a bug for importing package
  util 5916 over 9 years Matt Jones Add in correct node references in system metadata.
  workflow 5078 about 11 years daigle Change RequestUtil forwardRequest() method to t...
AccessionNumber.java 10.7 KB 5350 over 10 years berkley amost have update working. still need to get u...
AccessionNumberException.java 1.82 KB 3077 almost 14 years Matt Jones Removed the @release@ ant token from all files ...
ArchiveHandler.java 8.4 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
AssociateAccessPolicy.java 16.3 KB 5015 about 11 years daigle Create database and shared directories for data...
AuthInterface.java 3.76 KB 4546 almost 12 years daigle Add some generic typing
AuthLdap.java 48.3 KB 5629 almost 10 years berkley changes for dataone .5 schema updates
AuthSession.java 9.56 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
AuthStub.java 7.64 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
AuthTLSException.java 1.54 KB 5158 almost 11 years daigle Separate code to do tls and non-tls authenticat...
AuthTest.java 9.28 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
BasicNode.java 6.68 KB 3077 almost 14 years Matt Jones Removed the @release@ ant token from all files ...
CatalogMessageHandler.java 2.97 KB 3077 almost 14 years Matt Jones Removed the @release@ ant token from all files ...
CommentNode.java 2.13 KB 3077 almost 14 years Matt Jones Removed the @release@ ant token from all files ...
ContentTypeProvider.java 20.8 KB 5161 almost 11 years daigle Change warn messages to info
DBDTDHandler.java 5.38 KB 5015 about 11 years daigle Create database and shared directories for data...
DBEntityResolver.java 17.4 KB 5177 almost 11 years daigle Add a sleep statement between getting the dtd f...
DBQuery.java 100 KB 5760 almost 10 years ben leinfelder use detected document encoding or Metacat's def...
DBSAXHandler.java 30 KB 5888 over 9 years ben leinfelder pass the root exception message up the call cha...
DBSAXNode.java 20.6 KB 6012 over 9 years ben leinfelder add support for temporal element query in pathq...
DBSimpleQuery.java 7.44 KB 5015 about 11 years daigle Create database and shared directories for data...
DBTransform.java 16 KB 5752 almost 10 years ben leinfelder use detected XML encoding when reading/writing ...
DBUtil.java 27.3 KB 5201 over 10 years daigle Get the latest revision from metacat when a mod...
DBValidate.java 10.8 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
DistributionSection.java 3.07 KB 5090 about 11 years daigle Move access control source to it's own directory.
DocInfoHandler.java 5.21 KB 5440 over 10 years berkley fixed major bug in replication where the docume...
DocumentIdQuery.java 4.5 KB 5731 almost 10 years ben leinfelder typo - "dataset/pubDate"
DocumentIdentifier.java 7.55 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
DocumentImpl.java 183 KB 6012 over 9 years ben leinfelder add support for temporal element query in pathq...
DocumentImplWrapper.java 3.78 KB 5199 almost 11 years daigle Reformat file. No code change.
EML201DocumentCorrector.java 5.66 KB 5170 almost 11 years daigle Add debug to show sql
ElementNode.java 5.45 KB 4080 over 12 years daigle Merge 1.9 changes into Head
Eml200SAXHandler.java 115 KB 5752 almost 10 years ben leinfelder use detected XML encoding when reading/writing ...
Eml210SAXHandler.java 66.7 KB 5752 almost 10 years ben leinfelder use detected XML encoding when reading/writing ...
ErrorHandledException.java 1.53 KB 4950 over 11 years daigle Add archival read funtionality (jar/kar/war files)
EventLog.java 12.1 KB 5693 almost 10 years ben leinfelder allow public access to log information when doc...
EventLogData.java 3.19 KB 2101 over 16 years Matt Jones Modified EventLog to eliminate the separate rev...
IdentifierManager.java 40.1 KB 5957 over 9 years berkley fixed bug where the wrong checksum alg got writ...
IndexingQueue.java 9.53 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
IndexingTimerTask.java 4.29 KB 5319 over 10 years Matt Jones Modifications to support the DataONE service AP...
McdbDocNotFoundException.java 2.94 KB 5282 over 10 years Matt Jones Added initial support for arbitrary string iden...
McdbException.java 3.49 KB 5752 almost 10 years ben leinfelder use detected XML encoding when reading/writing ...
MetaCatServlet.java 46.8 KB 6012 over 9 years ben leinfelder add support for temporal element query in pathq...
MetacatHandler.java 162 KB 5998 over 9 years Chris Jones To support GUIDs in MetacatHandler.handleDelete...
MetacatProfiler.java 7.6 KB 5607 about 10 years berkley profiler code for metacat
MetacatResultSet.java 4.69 KB 5363 over 10 years berkley implementing getObjects in CrudService.
MetacatURL.java 9.32 KB 3077 almost 14 years Matt Jones Removed the @release@ ant token from all files ...
MetacatVersion.java 2.06 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
NodeComparator.java 3.49 KB 3077 almost 14 years Matt Jones Removed the @release@ ant token from all files ...
NodeRecord.java 6.91 KB 6012 over 9 years ben leinfelder add support for temporal element query in pathq...
PINode.java 2.17 KB 3079 almost 14 years Matt Jones Eliminated unneeded log information in source c...
PathIndexEntry.java 2.87 KB 6012 over 9 years ben leinfelder add support for temporal element query in pathq...
PermissionController.java 35.5 KB 5742 almost 10 years berkley fixed bug where comparisons didn't work because...
QueryGroup.java 13.1 KB 5015 about 11 years daigle Create database and shared directories for data...
QueryResultTableBuilder.java 3.19 KB 3799 over 12 years Jing Tao Add a new class will build query result able in...
QuerySpecification.java 39.3 KB 5311 over 10 years daigle Merge 1.9.2 changes back into the trunk
QueryTerm.java 21.6 KB 6012 over 9 years ben leinfelder add support for temporal element query in pathq...
RelationHandler.java 8.17 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
RemoteDocument.java 17 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
SchemaLocationResolver.java 13 KB 5945 over 9 years Jing Tao Add code to download the included schema.
Sitemap.java 10.1 KB 5030 about 11 years daigle Change location of PropertyService to propertie...
StopParsingException.java 1.43 KB 5606 about 10 years berkley exception to throw when the sax parse should stop
SubTree.java 7.7 KB 5311 over 10 years daigle Merge 1.9.2 changes back into the trunk
TextNode.java 2.09 KB 3077 almost 14 years Matt Jones Removed the @release@ ant token from all files ...
Version.java 2.92 KB 4080 over 12 years daigle Merge 1.9 changes into Head
XMLQueryresultAccess.java 4.13 KB 5195 almost 11 years daigle Pass the doc xml as a string to docImpl.write a...

Latest revisions

# Date Author Comment
6012 03/16/2011 10:56 PM ben leinfelder

add support for temporal element query in pathquery
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2084

6001 03/02/2011 02:12 PM Chris Jones

DocumentImpl.delete() now throws finer grained exceptions (not a general exception). Consequently, the classes that call it have been updated to handle the thrown exceptions, including CrudService, ReplicationHandler, and ReplicationService.

6000 03/02/2011 10:39 AM ben leinfelder

refactor the names of these Data Manager implementation classes so that it's easier to use them with the default/local versions of similar. These classes utilize Metacat-specific configuration values rather than relying soley on the bundles that are used in the stand-alone DM lib.

5998 03/01/2011 09:13 AM Chris Jones

To support GUIDs in MetacatHandler.handleDeleteAction(), I've added in a new method:
deleteFromMetacat() - deletes a document based on the docid
This factors the deletion code out of handleDeleteAction(). handleDeleteAction() now does a docid lookup based on GUID, and if it is not found, reverts to the deletion based on docid instead.

5977 02/17/2011 02:57 AM Chris Jones

These are fairly significant changes to MetacatHandler.handleInsertOrUpdateAction() that add in support for creation or update of GUIDs and SystemMetadata. Upon insertion or update of DataPackages from non-DataONE aware clients (such as Morpho), the identifier table is updated by creating a GUID, and the systemmetadata table is updated with fields after the EML document is parsed for distribution information and entity typing. System Metadata documents are also generated and inserted into Metacat. The list of data entities is iterated over and System Metadata is generated for each data file as well.

5976 02/17/2011 02:39 AM Chris Jones

In MetacatHandler I've removed updateSystemMetadata() in favor of additions to insertOrUpdateSystemMetadata(). Modified createSystemMetadata() to reflect the changes as well.

5975 02/16/2011 06:23 PM Chris Jones

Modified MetacatHandler.createSystemMetadata() to take a localId, not a guid as an argument since there are times when the guid has yet to have been created, and it is created in this method if so.
Also, put the read() call to get the InputStream of the data/metadata document into it's own try/catch statement.

5968 02/16/2011 01:56 PM Chris Jones

Somehow missed adding in javadoc for read(). Here it is.

5967 02/16/2011 01:52 PM Chris Jones

For now, getSystemMetadata() will be private like the other *SystemMetadata() methods.

5966 02/16/2011 01:47 PM Chris Jones

Modified MetacatHandler, updated the getSystemMetadata() method to now use read() and deserializeSystemMetadata() to produce the SystemMetadata object. Exceptions are pushed up the stack, and so accordingly, modified createSystemMetadata() to reflect the changes.

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