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metacat / src / xmltables-postgres.sql @ 7428

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/**
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 *  '$RCSfile$'
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 *  Copyright: 2004 Regents of the University of California and the
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 *             National Center for Ecological Analysis and Synthesis
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 *
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 *   '$Author: leinfelder $'
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 *     '$Date: 2012-09-24 13:09:12 -0700 (Mon, 24 Sep 2012) $'
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 * '$Revision: 7392 $'
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 *
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 * This program is free software, you can redistribute it and/or modify
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 * it under the terms of the GNU General Public License as published by
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 * the Free Software Foundation, either version 2 of the License, or
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 * (at your option) any later version.
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 *
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 * This program is distributed in the hope that it will be useful,
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 * but WITHOUT ANY WARRANTY, without even the implied warranty of
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 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 * GNU General Public License for more details.
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 *
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 * You should have received a copy of the GNU General Public License
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 * along with this program, if not, write to the Free Software
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 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
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 */
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/*
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 * this is sql script does the same as the sql script named
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 * xmltables.sql except that this script is to be use to
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 * create the database tables on a Postgresql backend rather
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 * than an Oracle Backend
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 */
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/*
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 * Replication -- table to store servers that metacat is replicated to
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 */
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CREATE SEQUENCE xml_replication_id_seq;
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CREATE TABLE xml_replication (
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  serverid INT8 default nextval('xml_replication_id_seq'),
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  server VARCHAR(512),
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  last_checked DATE,
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  replicate INT8,
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  datareplicate INT8,
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  hub INT8,
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  CONSTRAINT xml_replication_pk PRIMARY KEY (serverid)
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);
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INSERT INTO xml_replication (server, replicate, datareplicate, hub) VALUES ('localhost', '0', '0', '0');
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/*
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 * Nodes -- table to store XML Nodes (both elements and attributes)
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 */
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CREATE SEQUENCE xml_nodes_id_seq;
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CREATE TABLE xml_nodes (
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        nodeid INT8 default nextval('xml_nodes_id_seq'),
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                                        -- the unique node id (pk)
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        nodeindex INT8,                -- order of nodes within parent
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        nodetype VARCHAR(20),        -- type (DOCUMENT, COMMENT, PI,
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                                -- ELEMENT, ATTRIBUTE, TEXT)
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        nodename VARCHAR(250),        -- the name of an element or attribute
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        nodeprefix VARCHAR(50), -- the namespace prefix of the node
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        nodedata TEXT, -- the data for this node (e.g.,
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                                -- for TEXT it is the content)
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        parentnodeid INT8,        -- index of the parent of this node
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        rootnodeid INT8,        -- index of the root node of this tree
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        docid VARCHAR(250),        -- index to the document id
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        date_created DATE,
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        date_updated DATE,
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    nodedatanumerical FLOAT8, -- the data for this node if it is a number
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    nodedatadate TIMESTAMP, -- the data for this node if it is a date
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   CONSTRAINT xml_nodes_pk PRIMARY KEY (nodeid),
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   CONSTRAINT xml_nodes_root_fk
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                FOREIGN KEY (rootnodeid) REFERENCES xml_nodes,
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   CONSTRAINT xml_nodes_parent_fk
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                FOREIGN KEY (parentnodeid) REFERENCES xml_nodes
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);
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/*
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 * Indexes of rootnodeid, parentnodeid, and nodename in xml_nodes
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 */
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CREATE INDEX xml_nodes_idx1 ON xml_nodes (rootnodeid);
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CREATE INDEX xml_nodes_idx2 ON xml_nodes (parentnodeid);
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CREATE INDEX xml_nodes_idx3 ON xml_nodes (nodename);
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CREATE INDEX xml_nodes_idx4 ON xml_nodes (docid);
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/*
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 * Table for storing the nodes for the old revisions of the document and the deleted documents
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 */
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CREATE TABLE xml_nodes_revisions (
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        nodeid INT8,            -- the unique node id (pk)
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        nodeindex INT8,         -- order of nodes within parent
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        nodetype VARCHAR(20),   -- type (DOCUMENT, COMMENT, PI,
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                                -- ELEMENT, ATTRIBUTE, TEXT)
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        nodename VARCHAR(250),  -- the name of an element or attribute
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        nodeprefix VARCHAR(50), -- the namespace prefix of the node
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        nodedata TEXT, -- the data for this node (e.g.,
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                                -- for TEXT it is the content)
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        parentnodeid INT8,      -- index of the parent of this node
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        rootnodeid INT8,        -- index of the root node of this tree
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        docid VARCHAR(250),     -- index to the document id
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        date_created DATE,
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        date_updated DATE,
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        nodedatanumerical FLOAT8, -- the data for this node if it is a number
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        nodedatadate TIMESTAMP, -- the data for this node if it is a date
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   CONSTRAINT xml_nodes_revisions_pk PRIMARY KEY (nodeid),
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   CONSTRAINT xml_nodes_revisions_root_fk
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                FOREIGN KEY (rootnodeid) REFERENCES xml_nodes_revisions,
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   CONSTRAINT xml_nodes_revisions_parent_fk
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                FOREIGN KEY (parentnodeid) REFERENCES xml_nodes_revisions
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);
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/*
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 * Indexes of rootnodeid, parentnodeid, and nodename in xml_nodes_revisions
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 */
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CREATE INDEX xml_nodes_revisions_idx1 ON xml_nodes_revisions (rootnodeid);
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CREATE INDEX xml_nodes_revisions_idx2 ON xml_nodes_revisions (parentnodeid);
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CREATE INDEX xml_nodes_revisions_idx3 ON xml_nodes_revisions (nodename);
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/*
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 * XML Catalog -- table to store all external sources for XML documents
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 */
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CREATE SEQUENCE xml_catalog_id_seq;
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CREATE TABLE xml_catalog (
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        catalog_id INT8 default nextval('xml_catalog_id_seq'),
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                                        -- the id for this catalog entry
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        entry_type VARCHAR(500),        -- the type of this catalog entry
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                                        -- (e.g., DTD, XSD, XSL)
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        source_doctype VARCHAR(500),        -- the source public_id for transforms
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        target_doctype VARCHAR(500),        -- the target public_id for transforms
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        public_id VARCHAR(500),        -- the unique id for this type
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        system_id VARCHAR(1000),        -- the local location of the object
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   CONSTRAINT xml_catalog_pk PRIMARY KEY (catalog_id),
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   CONSTRAINT xml_catalog_uk UNIQUE
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              (entry_type, source_doctype, target_doctype, public_id)
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);
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/*
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 * Sequence to get uniqueID for Accession #
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 */
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CREATE SEQUENCE xml_documents_id_seq;
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/*
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 * Documents -- table to store XML documents
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 */
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CREATE TABLE xml_documents (
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        docid VARCHAR(250),        -- the document id #
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        rootnodeid INT8,                -- reference to root node of the DOM
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        docname VARCHAR(100),        -- usually the root element name
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        doctype VARCHAR(100),        -- public id indicating document type
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        user_owner VARCHAR(100),        -- the user owned the document
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        user_updated VARCHAR(100),        -- the user updated the document
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        server_location INT8,        -- the server on which this document resides
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        rev INT8 default 1,   -- the revision number of the document
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        date_created DATE,
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        date_updated DATE,
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        public_access INT8,        -- flag for public access
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        catalog_id INT8,        -- reference to xml_catalog
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     CONSTRAINT xml_documents_pk PRIMARY KEY (docid),
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     CONSTRAINT xml_documents_rep_fk
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                     FOREIGN KEY (server_location) REFERENCES xml_replication,
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    CONSTRAINT xml_documents_root_fk
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                FOREIGN KEY (rootnodeid) REFERENCES xml_nodes,
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   CONSTRAINT xml_documents_catalog_fk
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                FOREIGN KEY (catalog_id) REFERENCES xml_catalog
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);
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/*
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 * Index of <docid,doctype> in xml_document
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 */
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CREATE INDEX xml_documents_idx1 ON xml_documents (docid, doctype);
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CREATE INDEX xml_documents_idx2 ON xml_documents (lower(user_owner));
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CREATE INDEX xml_documents_idx3 ON xml_documents (rootnodeid);
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/*
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 * Revised Documents -- table to store XML documents saved after an UPDATE
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 *                    or DELETE
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 */
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CREATE SEQUENCE xml_revisions_id_seq;
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CREATE TABLE xml_revisions (
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        revisionid INT8  default nextval('xml_revisions_id_seq'),
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                                        -- the revision number we are saving
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        docid VARCHAR(250),        -- the document id #
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        rootnodeid INT8,                -- reference to root node of the DOM
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        docname VARCHAR(100),        -- usually the root element name
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        doctype VARCHAR(100),        -- public id indicating document type
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        user_owner VARCHAR(100),
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        user_updated VARCHAR(100),
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        server_location INT8,
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        rev INT8,
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        date_created DATE,
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        date_updated DATE,
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        public_access INT8,        -- flag for public access
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        catalog_id INT8,        -- reference to xml_catalog
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   CONSTRAINT xml_revisions_pk PRIMARY KEY (revisionid),
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   CONSTRAINT xml_revisions_rep_fk
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                FOREIGN KEY (server_location) REFERENCES xml_replication,
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   CONSTRAINT xml_revisions_root_fk
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                FOREIGN KEY (rootnodeid) REFERENCES xml_nodes_revisions,
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   CONSTRAINT xml_revisions_catalog_fk
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                FOREIGN KEY (catalog_id) REFERENCES xml_catalog
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);
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CREATE INDEX xml_revisions_idx1 ON xml_revisions (docid);
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/*
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 * ACL -- table to store ACL for XML documents by principals
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 */
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CREATE TABLE xml_access (
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        guid text,        -- foreign key to system metadata
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        accessfileid text,        -- the id for the access file
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        principal_name VARCHAR(100),        -- name of user, group, etc.
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        permission INT8,                -- "read", "write", "all"
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        perm_type VARCHAR(32),        -- "allowed" or "denied"
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        perm_order VARCHAR(32),        -- "allow first" or "deny first"
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        begin_time DATE,                -- the time that permission begins
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        end_time DATE,                -- the time that permission ends
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        ticket_count INT8,                -- ticket counter for that permission
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  subtreeid VARCHAR(32),
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  startnodeid INT8,
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  endnodeid INT8,
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   CONSTRAINT xml_access_ck CHECK (begin_time < end_time)
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);
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CREATE INDEX xml_access_idx1 ON xml_access (lower(principal_name));
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CREATE INDEX xml_access_idx2 ON xml_access (permission);
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CREATE INDEX xml_access_idx3 ON xml_access (perm_type);
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CREATE INDEX xml_access_idx4 ON xml_access (perm_order);
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CREATE INDEX xml_access_idx5 ON xml_access (subtreeid);
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/*
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 * ALTER TABLE xml_access ADD COLUMN guid text;
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*/
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/*
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 * Index of Nodes -- table to store precomputed paths through tree for
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 * quick searching in structured searches
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 */
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CREATE TABLE xml_index (
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        nodeid INT8,                -- the unique node id
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        path TEXT,        -- precomputed path through tree
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        docid VARCHAR(250),        -- index to the document id
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        doctype VARCHAR(100),        -- public id indicating document type
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        parentnodeid INT8,      -- id of the parent of the node represented
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                                -- by this row
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   CONSTRAINT xml_index_pk PRIMARY KEY (nodeid,path),
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   CONSTRAINT xml_index_nodeid_fk FOREIGN KEY (nodeid) REFERENCES xml_nodes,
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   CONSTRAINT xml_index_docid_fk
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                FOREIGN KEY (docid) REFERENCES xml_documents
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);
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/*
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 * Index of the paths in xml_index
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 */
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CREATE INDEX xml_index_idx1 ON xml_index (path);
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CREATE INDEX xml_index_idx2 ON xml_index (docid);
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CREATE INDEX xml_index_idx3 ON xml_index (nodeid);
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CREATE SEQUENCE xml_relation_id_seq;
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CREATE TABLE xml_relation (
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        relationid INT8 default nextval('xml_relation_id_seq') PRIMARY KEY,
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                                             -- unique id
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        docid VARCHAR(250) ,         -- the docid of the package file
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                                             -- that this relation came from
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        packagetype VARCHAR(250),          -- the type of the package
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        subject VARCHAR(512) NOT NULL, -- the subject of the relation
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        subdoctype VARCHAR(128),                 -- the doctype of the subject
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        relationship VARCHAR(128)  NOT NULL,-- the relationship type
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        object VARCHAR(512) NOT NULL, -- the object of the relation
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        objdoctype VARCHAR(128),          -- the doctype of the object
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        CONSTRAINT xml_relation_uk UNIQUE (docid, subject, relationship, object),
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        CONSTRAINT xml_relation_docid_fk
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                FOREIGN KEY (docid) REFERENCES xml_documents
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);
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/*
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 * Table used to store all document identifiers in metacat.  Each identifier
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 * has a globally unique, unconstrained string, which we will refer to as a
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 * GUID, and a local metacat identifier, which consists of the docid
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 * and revision fields. Each row maps one global identifier to the local
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 * identifier (docid) used within metacat.
279
 */
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CREATE TABLE identifier (
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   guid   text,          -- the globally unique string identifier
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   docid  VARCHAR(250),         -- the local document id #
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   rev    INT8,          -- the revision part of the local identifier
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   CONSTRAINT identifier_pk PRIMARY KEY (guid)
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);
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/*
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 * Table used to store all document identifiers for system metadata objects
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 * similar restraints to identifier.  Cannot use identifier table for this 
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 * purpose because then you have to worry about whether you insert the
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 * data first or the systemMetadata first.
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 */
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CREATE TABLE systemMetadata (
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        guid   text,          -- the globally unique string identifier of the object that the system metadata describes
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        serial_version VARCHAR(256), --the serial version of the object
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        date_uploaded TIMESTAMP, -- the date/time the document was first submitted
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        rights_holder VARCHAR(250), --the user who has rights to the document, usually the first persons to upload it
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        checksum VARCHAR(512), --the checksum of the doc using the given algorithm (see below)
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        checksum_algorithm VARCHAR(250), --the algorithm used to calculate the checksum
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        origin_member_node VARCHAR(250), --the member node where the document was first uploaded
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        authoritive_member_node VARCHAR(250), --the member node that currently controls the document
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        date_modified TIMESTAMP, -- the last date/time that the file was changed
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        submitter VARCHAR(256), -- the user who originally submitted the doc
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        object_format VARCHAR(256), --the format of the object
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        size VARCHAR(256), --the size of the object
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        archived boolean,         -- specifies whether this an archived object
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        replication_allowed boolean,         -- replication allowed
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        number_replicas INT8,         -- the number of replicas allowed
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        obsoletes   text,       -- the identifier that this record obsoletes
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        obsoleted_by   text,     -- the identifier of the record that replaces this record
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        CONSTRAINT systemMetadata_pk PRIMARY KEY (guid)
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);
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/*
314
 * For devs to remove docid, rev
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 * ALTER TABLE systemMetadata DROP COLUMN docid;
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 * ALTER TABLE systemMetadata DROP COLUMN rev;
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 * ALTER TABLE systemMetadata ADD COLUMN replication_allowed boolean;
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 * ALTER TABLE systemMetadata ADD COLUMN number_replicas INT8;
319
 */
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CREATE TABLE smReplicationPolicy (
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        guid text,        -- the globally unique string identifier of the object that the system metadata describes
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        member_node VARCHAR(250),         -- replication member node
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        policy text,         -- the policy (preferred, blocked, etc...TBD)
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        CONSTRAINT smReplicationPolicy_fk 
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                FOREIGN KEY (guid) REFERENCES systemMetadata DEFERRABLE
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);
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CREATE TABLE smReplicationStatus (
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        guid text,        -- the globally unique string identifier of the object that the system metadata describes
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        member_node VARCHAR(250),         -- replication member node
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        status VARCHAR(250),         -- replication status
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        date_verified TIMESTAMP,         -- the date replication was verified   
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        CONSTRAINT smReplicationStatus_fk 
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                FOREIGN KEY (guid) REFERENCES systemMetadata DEFERRABLE
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);
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/*
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 * accesssubtree -- table to store access subtree info
341
 */
342
CREATE TABLE xml_accesssubtree (
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        docid                VARCHAR(250),        -- the document id #
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  rev                 INT8 default 1, --the revision number of the docume
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  controllevel VARCHAR(50), -- the level it control -- document or subtree
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  subtreeid VARCHAR(250), -- the subtree id
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        startnodeid        INT8,        -- the start node id of access subtree
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  endnodeid INT8, -- the end node if of access subtree
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  CONSTRAINT xml_accesssubtree_docid_fk
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                FOREIGN KEY (docid) REFERENCES xml_documents
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);
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/*
354
 * Returnfields -- table to store combinations of returnfields requested
355
 *                    and the number of times this table is accessed
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 */
357
CREATE SEQUENCE xml_returnfield_id_seq;
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CREATE TABLE xml_returnfield (
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        returnfield_id     INT8 default nextval('xml_returnfield_id_seq'),   -- the id for this returnfield entry
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        returnfield_string VARCHAR(2000),                                    -- the returnfield string
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        usage_count        INT8,                                             -- the number of times this string has been requested
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        CONSTRAINT xml_returnfield_pk PRIMARY KEY (returnfield_id)
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);
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CREATE INDEX xml_returnfield_idx1 ON xml_returnfield(returnfield_string);
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/*
367
 * Queryresults -- table to store queryresults for a given docid
368
 * and returnfield_id
369
 */
370
CREATE SEQUENCE xml_queryresult_id_seq;
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CREATE TABLE xml_queryresult(
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  queryresult_id INT8 default nextval('xml_queryresult_id_seq'), -- id for this entry
373
  returnfield_id       INT8,          -- id for the returnfield corresponding to this entry
374
  docid                VARCHAR(250),  -- docid of the document
375
  queryresult_string   TEXT, -- resultant text generated for this docid and given
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                                         -- returnfield
377
  CONSTRAINT xml_queryresult_pk PRIMARY KEY (queryresult_id),
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  CONSTRAINT xml_queryresult_searchid_fk
379
               FOREIGN KEY (returnfield_id) REFERENCES xml_returnfield
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);
381

    
382
CREATE INDEX xml_queryresult_idx1 ON xml_queryresult (returnfield_id, docid);
383

    
384
/*
385
 * Logging -- table to store metadata and data access log
386
 */
387
CREATE SEQUENCE access_log_id_seq;
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CREATE TABLE access_log (
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  entryid       INT8 default nextval ('access_log_id_seq'), -- the identifier for the log event
390
  ip_address    VARCHAR(512),   -- the ip address inititiating the event
391
  user_agent    VARCHAR(512),   -- the user agent for the request
392
  principal     VARCHAR(512),   -- the user initiating the event
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  docid         VARCHAR(250),        -- the document id #
394
  event         VARCHAR(512),   -- the code symbolizing the event type
395
  date_logged   TIMESTAMP,      -- the datetime on which the event occurred
396
  CONSTRAINT access_log_pk PRIMARY KEY (entryid)
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);
398

    
399

    
400
/*
401
 * Table for indexing the paths specified the administrator in metacat.properties
402
 */
403

    
404
CREATE SEQUENCE xml_path_index_id_seq;
405
CREATE TABLE xml_path_index (
406
    nodeid INT8  default nextval('xml_path_index_id_seq'),
407
        docid VARCHAR(250),     -- the document id
408
        path TEXT,     -- precomputed path through tree
409
        nodedata TEXT, -- the data for this node (e.g.,
410
                                -- for TEXT it is the content)
411
        nodedatanumerical FLOAT8, -- the data for this node if it is a number
412
        nodedatadate TIMESTAMP, -- the data for this node if it is a date
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        parentnodeid INT8,      -- id of the parent of the node represented
414
                                -- by this row
415
   CONSTRAINT xml_path_index_pk PRIMARY KEY (nodeid),
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   CONSTRAINT xml_path_index_docid_fk
417
                FOREIGN KEY (docid) REFERENCES xml_documents
418
);
419

    
420
/*
421
 * Indexes of path, nodedata and nodedatanumerical in xml_path_index
422
 */
423
CREATE INDEX xml_path_index_idx1 ON xml_path_index (path);
424
CREATE INDEX xml_path_index_idx2 ON xml_path_index (nodedata);
425
CREATE INDEX xml_path_index_idx3 ON xml_path_index (nodedatanumerical);
426
CREATE INDEX xml_path_index_idx4 ON xml_path_index (upper(nodedata));
427
CREATE INDEX xml_path_index_idx5 ON xml_path_index (nodedatadate);
428

    
429
/*
430
 * harvest_site_schedule -- table to store harvest sites and schedule info
431
 */
432
CREATE TABLE harvest_site_schedule (
433
  site_schedule_id INT8,         -- unique id
434
  documentlisturl  VARCHAR(255), -- URL of the site harvest document list
435
  ldapdn           VARCHAR(255), -- LDAP distinguished name for site account
436
  datenextharvest  DATE,         -- scheduled date of next harvest
437
  datelastharvest  DATE,         -- recorded date of last harvest
438
  updatefrequency  INT8,         -- the harvest update frequency
439
  unit             VARCHAR(50),  -- update unit -- days weeks or months
440
  contact_email    VARCHAR(50),  -- email address of the site contact person
441
  ldappwd          VARCHAR(20),  -- LDAP password for site account
442
  CONSTRAINT harvest_site_schedule_pk PRIMARY KEY (site_schedule_id)
443
);
444

    
445
/*
446
 * harvest_log -- table to log entries for harvest operations
447
 */
448
CREATE TABLE harvest_log (
449
  harvest_log_id         INT8,          -- unique id
450
  harvest_date           DATE,          -- date of the current harvest
451
  status                 INT8,          -- non-zero indicates an error status
452
  message                VARCHAR(1000), -- text message for this log entry
453
  harvest_operation_code VARCHAR(30),   -- the type of harvest operation
454
  site_schedule_id       INT8,          -- site schedule id, or 0 if no site
455
  CONSTRAINT harvest_log_pk PRIMARY KEY (harvest_log_id)
456
);
457

    
458
/*
459
 * harvest_detail_log -- table to log detailed info about documents that
460
 *                       generated errors during the harvest
461
 */
462
CREATE TABLE harvest_detail_log (
463
  detail_log_id          INT8,          -- unique id
464
  harvest_log_id         INT8,          -- ponter to the related log entry
465
  scope                  VARCHAR(50),   -- document scope
466
  identifier             INT8,          -- document identifier
467
  revision               INT8,          -- document revision
468
  document_url           VARCHAR(255),  -- document URL
469
  error_message          VARCHAR(1000), -- text error message
470
  document_type          VARCHAR(100),  -- document type
471
  CONSTRAINT harvest_detail_log_pk PRIMARY KEY (detail_log_id),
472
  CONSTRAINT harvest_detail_log_fk
473
        FOREIGN KEY (harvest_log_id) REFERENCES harvest_log
474
);
475

    
476
/*
477
 * db_version -- table to store the version history of this database
478
 */
479
CREATE SEQUENCE db_version_id_seq;
480
CREATE TABLE db_version (
481
  db_version_id   INT8 default nextval ('db_version_id_seq'), -- the identifier for the version
482
  version         VARCHAR(250),     -- the version number
483
  status          INT8,             -- status of the version
484
  date_created    TIMESTAMP,        -- the datetime on which the version was created
485
  CONSTRAINT db_version_pk PRIMARY KEY (db_version_id)
486
);
487

    
488
/*
489
 * scheduled_job -- table to store scheduled jobs
490
 */
491
CREATE SEQUENCE scheduled_job_id_seq;
492
CREATE TABLE scheduled_job (
493
  id INT8 NOT NULL default nextval('scheduled_job_id_seq'),
494
  date_created TIMESTAMP NOT NULL,
495
  date_updated TIMESTAMP NOT NULL,
496
  status VARCHAR(64) NOT NULL,
497
  name VARCHAR(512) NOT NULL,
498
  trigger_name VARCHAR(512) NOT NULL,
499
  group_name VARCHAR(512) NOT NULL,
500
  class_name VARCHAR(1024) NOT NULL,
501
  start_time TIMESTAMP NOT NULL,
502
  end_time TIMESTAMP,
503
  interval_value INT NOT NULL,
504
  interval_unit VARCHAR(8) NOT NULL,
505
  CONSTRAINT scheduled_job_pk PRIMARY KEY (id),
506
  CONSTRAINT scheduled_job_uk UNIQUE (name)
507
);
508

    
509
/*
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 * scheduled_job_params -- table to store scheduled jobs
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 */
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CREATE SEQUENCE scheduled_job_params_id_seq;
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CREATE TABLE scheduled_job_params (
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  id INT8  NOT NULL default nextval('scheduled_job_params_id_seq'),
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  date_created TIMESTAMP NOT NULL,
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  date_updated TIMESTAMP  NOT NULL,
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  status VARCHAR(64)  NOT NULL,
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  job_id INT8 NOT NULL,
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  key VARCHAR(64) NOT NULL,
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  value VARCHAR(1024) NOT NULL,
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  CONSTRAINT scheduled_job_params_pk PRIMARY KEY (id),
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  CONSTRAINT scheduled_job_params_fk
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        FOREIGN KEY (job_id) REFERENCES scheduled_job(id)
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);