Closing some more streams that were left open. This Bug #6136 seems to be pervasive and is going to require an extensive audit to find all of the places where streams are not closed properly.
Refactor to use IOUtils.closeQuietly() which handles nulls and streams that are already closed.
Added close() to finally block for readFromFileSystem() call.
Closing FileOutputStream handles so that the OS limits on filehandles are not exceeded.
Add code to delete existing records for a id when we try to add the id to the index_event table.
do not modify existing SystemMetadata on MN.update() if something goes wrong during content insertion. https://projects.ecoinformatics.org/ecoinfo/issues/6101
Refer to metacat.war deployments since those are now the default. https://projects.ecoinformatics.org/ecoinfo/issues/6082
use UTF-8 if request encoding not given. https://projects.ecoinformatics.org/ecoinfo/issues/6100
require authenticated session when minting a DOI/other identifier. https://projects.ecoinformatics.org/ecoinfo/issues/6086
include the dataone.subject (node admin) in the list of administrators. This allows full administrative access to objects when using certificates+d1 api. https://projects.ecoinformatics.org/ecoinfo/issues/6086
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