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metacat / src / upgrade-db-to-1.5-postgres.sql @ 8556

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/**
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 *  '$RCSfile$'
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 *  Copyright: 2004 Regents of the University of California and the
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 *             National Center for Ecological Analysis and Synthesis
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 *
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 *   '$Author: daigle $'
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 *     '$Date: 2008-07-06 21:25:34 -0700 (Sun, 06 Jul 2008) $'
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 * '$Revision: 4080 $'
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 *
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 * This program is free software; you can redistribute it and/or modify
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 * it under the terms of the GNU General Public License as published by
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 * the Free Software Foundation; either version 2 of the License, or
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 * (at your option) any later version.
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 *
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 * This program is distributed in the hope that it will be useful,
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 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 * GNU General Public License for more details.
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 *
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 * You should have received a copy of the GNU General Public License
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 * along with this program; if not, write to the Free Software
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 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
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 */
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/*
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 * Update the XML_CATALOG table. In Metacat 1.4.0, the system_id in xml_catalog
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 * pointed to knb metacat no matter where you install it. We need change it
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 * to local schema or dtd file.
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 */
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-access-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-access-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-attribute-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-attribute-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-constraint-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-constraint-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-coverage-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-coverage-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-coverage-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-coverage-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-dataset-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-dataset-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-entity-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-entity-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-literature-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-literature-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-physical-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-physical-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-project-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-project-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-protocol-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-protocol-@eml-version@//EN';
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UPDATE xml_catalog 
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   SET system_id = '/dtd/eml-software-@eml-version@.dtd'
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   WHERE public_id = '-//ecoinformatics.org//eml-software-@eml-version@//EN';
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UPDATE xml_catalog
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  SET system_id = '/schema/eml-2.0.0/eml.xsd'
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  WHERE public_id = '@eml2_0_0namespace@';
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UPDATE xml_catalog
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  SET system_id = '/schema/eml-2.0.1/eml.xsd'
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  WHERE public_id = '@eml2_0_1namespace@';
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UPDATE xml_catalog 
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   SET system_id = '/schema/eml-2.0.0/stmml.xsd'
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   WHERE public_id = '@stmmlnamespace@';
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/*
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 * In Metacat 1.4.0, if user insert a eml201 document and has record in xml_relation
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 * table. The package type in xml_relation table will be eml200 rather than eml201.
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 * The bug was fixed and we need a sql command to fix exsited records
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 */
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 UPDATE xml_relation SET packagetype='eml://ecoinformatics.org/eml-2.0.1' 
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    WHERE docid IN (SELECT docid from xml_documents WHERE doctype LIKE 'eml://ecoinformatics.org/eml-2.0.1');
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CREATE SEQUENCE xml_returnfield_id_seq;
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/*
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 * Returnfields -- table to store combinations of returnfields requested
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 *                  and the number of times this table is accessed
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 */
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CREATE TABLE xml_returnfield (
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        returnfield_id     INT8 default nextval('xml_returnfield_id_seq'),   -- the id for this returnfield entry
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        returnfield_string VARCHAR(2000),                                    -- the returnfield string
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        usage_count        INT8,                                             -- the number of times this string has been requested
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        CONSTRAINT xml_returnfield_pk PRIMARY KEY (returnfield_id)
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);
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CREATE INDEX xml_returnfield_idx1 ON xml_returnfield(returnfield_string);                                                                                 
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CREATE SEQUENCE xml_queryresult_id_seq;
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/*
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 * Queryresults -- table to store queryresults for a given docid
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 * and returnfield_id
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 */
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CREATE TABLE xml_queryresult(
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 queryresult_id INT8 default nextval('xml_queryresult_id_seq'), -- id for this entry
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  returnfield_id       INT8,          -- id for the returnfield corresponding to this entry
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  docid                VARCHAR(250),  -- docid of the document
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  queryresult_string   VARCHAR(4000), -- resultant text generated for this docid and given
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                                       -- returnfield
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  CONSTRAINT xml_queryresult_pk PRIMARY KEY (queryresult_id),
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  CONSTRAINT xml_queryresult_searchid_fk
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               FOREIGN KEY (returnfield_id) REFERENCES xml_returnfield
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);
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ALTER TABLE xml_nodes ADD nodedatanumerical FLOAT8;
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UPDATE xml_nodes SET nodedatanumerical = to_number(nodedata, '999999999999999999999999999D9999999999999999999999999999')
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WHERE nodedata IS NOT NULL AND UPPER(nodedata) = LOWER(nodedata)
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AND (TRIM(REPLACE(nodedata,'\n','')) SIMILAR TO '(^(-|[+]|[0-9])[0-9]*[.][0-9]*)'
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OR TRIM(REPLACE(nodedata,'\n','')) SIMILAR TO '^(.)[0-9]+'
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OR TRIM(REPLACE(nodedata,'\n','')) SIMILAR TO '^(-|[+]|[0-9])[0-9]*')
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AND TRIM(REPLACE(nodedata,'\n','')) not SIMILAR TO '(-|[+])';
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