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From 04/19/2004 to 05/18/2004

05/18/2004

07:45 AM Bug #1572 (Resolved): Error in uploading raw data to metacat...
Following error was reported by Johnoel Ancheta <johnoel@hawaii.edu>
i am having some problems uploading to our ...
Saurabh Garg
07:45 AM Bug #1571 (Resolved): Error in uploading raw data to metacat...
Following error was reported by Johnoel Ancheta <johnoel@hawaii.edu>
i am having some problems uploading to our ...
Saurabh Garg
07:44 AM Bug #1570 (Resolved): Error in uploading raw data to metacat...
Following error was reported by Johnoel Ancheta <johnoel@hawaii.edu>
i am having some problems uploading to our ...
Saurabh Garg

05/17/2004

04:13 PM Bug #1569: Local save doesnt work sometimes.
Pasting illegal characters into Morpho fields usually doesn't mess up a local
save because the Morpho doesn't validat...
Matt Jones
04:06 PM Bug #1569 (New): Local save doesnt work sometimes.
This was reported by Nicole Kaplan <nicole.kaplan@colostate.edu>
Nicole's comments:
The "local" save for data pac...
Saurabh Garg
03:44 PM Bug #1568 (New): Certain dialogues in DPW lock up the help
This was reported by Nicole Kaplan <nicole.kaplan@colostate.edu>
These dialogues are the child windows of DPW whic...
Saurabh Garg
03:38 PM Bug #1567 (Resolved): Taxonomic Coverage - importing data table during DPW
This was reported by Nicole Kaplan <nicole.kaplan@colostate.edu>
Her comments:
In the Taxonomic coverage, it would ...
Saurabh Garg

05/15/2004

09:05 PM Bug #1564: morpho couldnt contact server when asked to supply a list of dn to add to access list
After looking at the IRC log files, I realized that this bug was file around the
time that I noticed that the ldap da...
Chris Jones
09:00 PM Bug #1564: morpho couldnt contact server when asked to supply a list of dn to add to access list
Yes, the actual URL is
http://data.piscoweb.org/catalog/metacat
but Margaret had shortened the name in the email. ...
Chris Jones

05/14/2004

04:20 PM Bug #1566: recongizing time formats
For some reason, java doesnt seem to recognize even hh:mm:ss as a Date format.
It is able to recognize a full date li...
Perumal Sambasivam
12:44 PM Bug #1566 (New): recongizing time formats
morpho didnt recoginze a time column with format hh:mm:ss, although it let me
choose this category for the column. ...
Margaret O'Brien
03:01 PM Bug #1565: morpho wouldnt go look for an external table with descriptions of codes in a list
To import codes and definitions from an external table, that table has to be
imported into your datapackage (if it ha...
Perumal Sambasivam
12:39 PM Bug #1565 (Resolved): morpho wouldnt go look for an external table with descriptions of codes in a list
during the step import a text data file->define attribute or column ->
adding descriptions of codes in a list of enu...
Margaret O'Brien
02:07 PM Bug #1564: morpho couldnt contact server when asked to supply a list of dn to add to access list

Is it just http://data.piscoweb.org/? Shouldn't there be a /metacat at the end
of the URL? I am not sure what is t...
Saurabh Garg
12:33 PM Bug #1564 (Resolved): morpho couldnt contact server when asked to supply a list of dn to add to access list
morpho was unable to contact metacat server (given 1-2 minutes). Does this
depend on the path set in the config file...
Margaret O'Brien
01:59 PM Bug #1563: when adding owners to a dataset, morpho listed previously built eml2 packages, but didnt show a list names to choose from.

It works in 1.5.1 also. This function only works on new files. This won't work
on most of the old files. For this f...
Saurabh Garg
12:29 PM Bug #1563 (Resolved): when adding owners to a dataset, morpho listed previously built eml2 packages, but didnt show a list names to choose from.
morpho only showed people from the current package. I thought I remembered
seeing this work in 1.5.0?
Margaret O'Brien
04:45 AM Bug #1561: EML Attribute Page Editor doesn't handle some XML Schema attributes/elements correctly
An alternative 'fix' would be to change the way the tree editor handles xml
attributes. Right now it inserts suggeste...
Dan Higgins
04:37 AM Bug #1555: Unable to open data files of local data packages that are created in another profile
The real bug here is the fact that metadata from other profiles is visible, not
that data files are not!
The idea wa...
Dan Higgins
04:31 AM Bug #1562: "Local" icon missing in data package display
This 'bug' is really a deliberate 'feature' (although one that is apparently not
understood ;-). When a beta6 eml do...
Dan Higgins

05/13/2004

04:55 PM Bug #1561: EML Attribute Page Editor doesn't handle some XML Schema attributes/elements correctly
One more attribute not handled and left in the OrderedMap:
/eml:eml/dataset/dataTable/attributeList/attribute/storag...
Chris Jones
04:31 PM Bug #1561: EML Attribute Page Editor doesn't handle some XML Schema attributes/elements correctly
As an addition to this bug, some elements may have been overlooked as well:
/eml:eml/dataset/dataTable/attributeList...
Chris Jones
09:54 AM Bug #1561: EML Attribute Page Editor doesn't handle some XML Schema attributes/elements correctly
the map.remove() should be part of the setPanelData() method for the
enumeratedDomain subpanel, not the setPageData()...
Matthew Brooke
07:16 PM Bug #1561 (In Progress): EML Attribute Page Editor doesn't handle some XML Schema attributes/elements correctly
In morpho 1.5.1, the data Package Wizard creates EML2.0.0 packages without
inserting the (optional) enforced="yes|no...
Chris Jones
01:46 PM Bug #1562 (Resolved): "Local" icon missing in data package display
When opening a data package that was created with eml beta6, and using Java
1.4, the "local" icon on the data packa...
Andrea Andrea

05/12/2004

12:52 PM Bug #1559 (New): Morpho 1.5.1 Help: 5 problems with search feature
1. When I do a search for “User Guide” using the Search feature within Morpho
help, pages from the old version of t...
Andrea Andrea
12:49 PM Bug #1558 (New): Morpho 1.5.1 Help: 6 general problems/suggestions
1. When you first open the Morpho Help, a blank page is displayed. The user
guide index (“index.html”) should be di...
Andrea Andrea

05/05/2004

03:34 PM Bug #1555 (Resolved): Unable to open data files of local data packages that are created in another profile
If we create a local data package (with some data file) with public access in
one profile, and try to open that pac...
Perumal Sambasivam

04/30/2004

02:23 PM Bug #1550 (New): Missing images in eml doc in Morpho
The eml documentation that is generated for inclusion in the Morpho help
documentation does not display the element ...
Dan Higgins
02:19 PM Bug #1549 (New): Problem with corrupt beta6 packages
For some reason, a few older datapackages (e.g. higgins.2042.9) which contain
numerous data files are corrupt (meani...
Dan Higgins
11:51 AM Bug #1547 (New): incorporate eml parser into Morpho
Currently, a full check of the eml created by Morpho is not done until a package
is submitted to metacat where the s...
Dan Higgins
05:07 PM Bug #1541: image display problem with image data from beta6 docs
This bug was NOT caused by the transformation, but rather by the way data files
associated with a beta6 package were ...
Dan Higgins

04/29/2004

03:23 PM Bug #1541: image display problem with image data from beta6 docs
On Apr 28, 2004, at 10:34 AM, Christopher Jones wrote:
additional comments from Chris Jones:
The last EML2b6 bug I...
Dan Higgins
03:19 PM Bug #1541 (Resolved): image display problem with image data from beta6 docs
Images that were saved as part of eml-beta6 packages do not display properly
after transformation to eml2 in Morpho ...
Dan Higgins
03:16 PM Bug #1539: <keywordSet> is transformed incorrectly from EML2b6 to EML2
revised the style sheet to loop over keyWordSets so that eaxh keywordSet is
independently transformed.
Dan Higgins
12:46 PM Bug #1540: problem with moving beta6 data to local machine
The problem was a logic error in the serializeData command in the
AbstractDataPackage class. Data was being moved to ...
Dan Higgins
12:43 PM Bug #1540 (Resolved): problem with moving beta6 data to local machine
Cris Jones reported a problem where data associated with older beta6 data
packages could be displayed (from PISCO me...
Dan Higgins

04/28/2004

10:48 AM Bug #1539 (Resolved): <keywordSet> is transformed incorrectly from EML2b6 to EML2
The tansformation stylesheets from EML2b6 to EML2 incorrectly handle keywords.
An example:
In EML2b6 we have:
...
Chris Jones
08:56 AM Bug #1536: Special character problems
This problem has been fixed within Morpho by adding a new 'getDOMTreeAsString'
routine which include the 'normalize' ...
Dan Higgins
08:51 PM Bug #1537: whitespace causes incorrect XSL conversion of eml2beta6 to eml2 in <unit>
In order to do correct comparisons of STMML unit dictionary strings with
units that have incorrectly introduced leadi...
Chris Jones
08:37 PM Bug #1537 (Resolved): whitespace causes incorrect XSL conversion of eml2beta6 to eml2 in <unit>
The attribute dialogs in Morpho 1.4 allowed a researcher to enter a freetext
'unit' for typing a specific data colum...
Chris Jones

04/27/2004

08:02 AM Bug #1536 (Resolved): Special character problems
Users may import 'special characters' such as the degree symbol or the micro
symbol (Greek mu) into data packages, e...
Dan Higgins
05:05 PM Bug #1515: taxon dialog checks input but allows invalid input
fixed. now, a user cant leave a cell after entering some invalid data. invalid
entries, if any at all, are discarded...
Perumal Sambasivam
05:02 PM Bug #1520: taxo coverage data entry error
bug fixed. the data validation in the taxon page is better now. Now, you cannot
leave a cell till a valid data is en...
Perumal Sambasivam

04/26/2004

04:59 PM Bug #1535: role disappears under certain editing circumstances
Bug fixed. The entire party subtree was being replaced earlier and hence the
role information was lost. Now we can s...
Perumal Sambasivam
11:30 AM Bug #1535 (Resolved): role disappears under certain editing circumstances
1) open an existing datapackage, or create one from scratch
2) documentation -> research project
3) add a party to ...
Matthew Brooke
10:23 AM Bug #1534: DPW & Project page: Edit button always edits last Party in list, irrespective of selection
now call updateDOMFromPartiesList() from onRewind() and onAdvance() actions instead of from new
and edit button acti...
Matthew Brooke
10:16 PM Bug #1534 (Resolved): DPW & Project page: Edit button always edits last Party in list, irrespective of selection
In pages with party lists (CustomList displaying parties such as Owner, Contact etc), if the user hits
"edit", the ...
Matthew Brooke
10:22 AM Bug #1528: Move Up & Move Down buttons on party lists do not update DOM immediately
now call updateDOMFromPartiesList() from onRewind() and onAdvance() actions to fix this problem Matthew Brooke

04/22/2004

11:24 AM Bug #1533 (New): Support for retrieving online data into Morpho
Add support for retrieving online data into Morpho for local viewing (i.e. when
online urls retrieve a text data st...
Saurabh Garg
11:18 AM Bug #1532 (Resolved): Add support for "cloning" packages to support content re-use
Add support for "cloning" packages to support content re-use (i.e. as
independent new packages, not existing packag...
Saurabh Garg
11:16 AM Bug #1531 (Resolved): Import local eml documents to create new data packages
Add support for importing local eml documents to create new data packages,
along with tabular data they describe (i...
Saurabh Garg
11:01 AM Bug #458: Need to configure Morpho to accept stream-based result sets
JIng has added code to implement this and it is in Morpho 1.5.0. May need some
further refinements
Dan Higgins
11:00 AM Bug #1488: Taxon page citations list surrogates not updated to reflect remote reference edits
fixed in head of CVS Dan Higgins
10:17 AM Bug #1488: Taxon page citations list surrogates not updated to reflect remote reference edits
This bug still exists in Morpho 1.5.0. This moved to 1.6 target,although I think
it is fixed already in the CVS head
Dan Higgins
09:54 AM Bug #1523: At least one Moprho Users Guide DPW Help file screen shot wrong..
A number of screens were updated. Dan Higgins
09:42 AM Bug #1528 (Resolved): Move Up & Move Down buttons on party lists do not update DOM immediately
Move Up & Move Down buttons on party lists (in wizard, citation & project) do
not update DOM immediately - this mean...
Matthew Brooke
09:38 AM Bug #1526: Delete party number can cause empty owner
fixed - added updateDOMFromList call to add and edit action Matthew Brooke

04/21/2004

12:43 PM Bug #1508: New Data Table Wizard: Last Step does not add Table every time
Moving to 1.6 release since we cannot reproduce the problem. Dan Higgins
12:43 PM Bug #1504: Intermittant problem: DPW Finish Wizard / Enter New Table
Moving to 1.6 release since we cannot reproduce the problem. Dan Higgins
11:45 AM Bug #1525: ?? tags in Intro To Metadata help document are deactivated
It was a smart quotes problem. Now fixed. Saurabh Garg
11:32 AM Bug #1525: ?? tags in Intro To Metadata help document are deactivated
This is likely a problem with exporting from word and not replacing the "smart
quotes" with a standard character code.
Matt Jones
09:59 AM Bug #1525 (Resolved): ?? tags in Intro To Metadata help document are deactivated
This is REALLY a nit. But as I was reviewing this document, I noticed ??
character strings surounding words in seve...
Rick Reeves
11:15 AM Bug #1526 (Resolved): Delete party number can cause empty owner
Here is the steps to reproduce the bug:
1) In onwer page, click add button and party page will be shown. In party pa...
Jing Tao

04/20/2004

03:04 PM Bug #1524: People and Organization/Contacts screen missing from Morpho User Guide help`
There are several screen shots that are not present in the RC2 package (although
they ARE in the helpjar). This was a...
Dan Higgins
02:26 PM Bug #1524 (Resolved): People and Organization/Contacts screen missing from Morpho User Guide help`
The Morpho DPW People and Organizations/Contacts screen shot does not appear
in the Morpho RC2 Morpho User Guide .
Rick Reeves
03:00 PM Bug #1487: Citation Page: Authors List move up/down button problems on mac
moved components around so buttons show Dan Higgins
02:20 PM Bug #1523 (Resolved): At least one Moprho Users Guide DPW Help file screen shot wrong..
I downloaded RC2 at 11:00 Today Apr 20.
The 'New Data Package Wizard / Welcome to the Data Package Wizard' screen ...
Rick Reeves
01:34 PM Bug #1521: Column name labels in Morpho Data Table Display disappear
Multiline column headers are implemented using html label. The problem is that
Java's html renderer inserts a blink l...
Dan Higgins
12:23 PM Bug #1517: invalid entry allowed in URL fields
bug fixed (see previous comment) Dan Higgins
12:22 PM Bug #1517: invalid entry allowed in URL fields
Added test to the Online URL element that checks if value is a valid URL (using
the Java URL class).
Dan Higgins
10:47 AM Bug #1520: taxo coverage data entry error
The indicated error does show up in the system output stream but is not apparent
to the user (i.e. no dialog boxes po...
Dan Higgins
10:01 AM Bug #1516: display should actual instead of escaped characters
found where 'normalize' was called twice and removed call Dan Higgins
08:54 AM Bug #1516: display should actual instead of escaped characters
Interestingly enough, the display used to work OK - really!
It looks like we are now running the normalize method tw...
Dan Higgins
08:05 AM Bug #1508: New Data Table Wizard: Last Step does not add Table every time
Comments here similar to 1504. We have been unable to reproduce this error. Dan Higgins
08:04 AM Bug #1504: Intermittant problem: DPW Finish Wizard / Enter New Table
On April 19, Dan, Jing, and Chad all tried to reproduce this error, without
success! The Wizard was reconfigured to a...
Dan Higgins

04/19/2004

04:14 PM Bug #1519: geographic coverage screen needs lat/long order checking
fixed by swapping east/west values Dan Higgins
10:45 AM Bug #1519 (Resolved): geographic coverage screen needs lat/long order checking
need to check the order of the E/W values so that the lesser one comes first.
the bug is that if the lesser one com...
Chad Berkley
04:13 PM Bug #1476: add additional locations for geographic coverage list
finished by Chad Dan Higgins
04:12 PM Bug #1503: 3 bugs in owner, contact, and associated party steps of the dpw
seems to be fixed in RC2 (Andrea)
Could not replicate (Higgins, et al)
Dan Higgins
04:11 PM Bug #1500: Error message in dpw steps 4-9 of 15
seems to be fixed in RC2 (Andrea)
Could not replicate (Higgins, et al)
Dan Higgins
03:54 PM Bug #1522 (In Progress): Morpho Update
It would be cool if the user knew there was a new version of Morpho available
for download from the ecoinformatics....
Eric Fegraus
03:04 PM Bug #1504: Intermittant problem: DPW Finish Wizard / Enter New Table
Eric Fegraus had a similar problem, but no one else seems able to replicated!
Rick has since created at least 3 packa...
Dan Higgins
03:02 PM Bug #1518: Data Table Import Wizard
Is this something that needs to be handled in the documentation? (Dan Higgins) Dan Higgins
10:00 AM Bug #1518 (Resolved): Data Table Import Wizard
More examples are needed here...what categories/units/precision are species
presence/abscene (e.g. 0 or 1), plot nu...
Eric Fegraus
02:57 PM Bug #1511: Installer does not have all UserGuide images
revised installer script Dan Higgins
02:51 PM Bug #1513: Bug in the handling of the "additionalMetadata" elements by the EML Editor
Bug was due to empty 'description' tag under additionalMetadata. Editor trimmed
the subtree because it trims all subt...
Dan Higgins
08:23 AM Bug #1513 (Resolved): Bug in the handling of the "additionalMetadata" elements by the EML Editor
There seems to be a problem in the way the EML editor handles
the "additionalMetadata" elements.
In particular, ...
Perumal Sambasivam
12:04 PM Bug #1521 (Resolved): Column name labels in Morpho Data Table Display disappear
Displaying a data table for an existing Morpho data package using the 'tabbed
dialog' display. The column widths ar...
Rick Reeves
10:47 AM Bug #1520 (Resolved): taxo coverage data entry error
when you change the rank in the taxo table in the dpw then hit tab to the name
field, you get the following error, n...
Chad Berkley
10:02 AM Bug #1510: Custom unit problems
fixed by Peru Dan Higgins
09:52 AM Bug #1517 (Resolved): invalid entry allowed in URL fields
I was allowed to put invalid content into the URL fields of the dpw. Here's the
error upon validation:
Validatio...
Chad Berkley
09:47 AM Bug #1516 (Resolved): display should actual instead of escaped characters
in the main morpho dataset viewing screen, any character that is automatically
escaped by morpho (i.e. changed to an...
Chad Berkley
09:43 AM Bug #1515 (Resolved): taxon dialog checks input but allows invalid input
I pasted the text
>>>>>
<
&
"
'
into a taxon name. it told me that was invalid input and that i needed to...
Chad Berkley
08:29 AM Bug #1514 (Resolved): Citation DPW
Adding in citations during the taxonomic screen. The "Mo...." buttons are a
little confusing? Why are there two of ...
Eric Fegraus
08:20 AM Bug #1512 (Resolved): Taxon Import
Going through DPW RC2. Import taxa from the taxonomic screen doesn't clearly
say when or how you import a species ...
Eric Fegraus
 

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