Morpho: Issueshttps://projects.ecoinformatics.org/ecoinfo/https://projects.ecoinformatics.org/ecoinfo/ecoinfo/favicon.ico?14691340362001-07-13T01:00:16ZEcoinformatics Redmine
Redmine Bug #255 (Resolved): Migrate to EML 2 beta DTDs for all Morpho useshttps://projects.ecoinformatics.org/ecoinfo/issues/2552001-07-13T01:00:16ZMatt Jonesjones@nceas.ucsb.edu
<p>We need to get rid of the EML 1.4.1 DTDs from Morpho and start using the 2.0<br />DTDs. Although they are at best in a Beta form right now, we will be presenting<br />EML 2.0 and so need to demo EML 2.0 for the ESA meeting. Can leave both 1.4.1<br />and 2.0 DTDs in the distribution, but any new metadata generated should be EML<br />2.0 compliant.</p> Bug #254 (Resolved): Look up id sequence on morpho startuphttps://projects.ecoinformatics.org/ecoinfo/issues/2542001-07-12T16:54:16ZMatt Jonesjones@nceas.ucsb.edu
Allow users to move from one machine to another by looking up the max accession
<ol>
<li>from metacat and using it to set the "lastId" property in morpho.</li>
</ol> Bug #252 (Resolved): reformat table entity displayhttps://projects.ecoinformatics.org/ecoinfo/issues/2522001-07-12T16:39:06ZMatt Jonesjones@nceas.ucsb.edu
<p>Inthe package editor, the table entity display is formatted differently from the<br />basic package info. Need to make it consistent.</p> Bug #244 (Resolved): need refresh mechanism for query screenhttps://projects.ecoinformatics.org/ecoinfo/issues/2442001-07-06T17:43:45ZChad Berkleyberkley@nceas.ucsb.edu
<p>The query result screen needs to be able to handle a refresh command from other<br />plugins. This will allow the package editor/wizard (or other future plugins) to<br />call a refresh when it makes changes to the document base.</p> Bug #239 (Resolved): search dialog allows user to uncheck both catalog and local searchhttps://projects.ecoinformatics.org/ecoinfo/issues/2392001-06-19T23:37:10ZChad Berkleyberkley@nceas.ucsb.edu
<p>search dialog allows user to uncheck both catalog and local search. It then<br />throws a NullPointerException and crashes. Error checking should be added so<br />that only one of them can be unselected at a time, or the check boxes should be<br />turned into radio buttons (which are more suited for this purpose).</p> Bug #236 (Resolved): improve handling of query optionshttps://projects.ecoinformatics.org/ecoinfo/issues/2362001-06-13T08:56:43ZMatt Jonesjones@nceas.ucsb.edu
<p>QueryDialog currently hard codes the "casesensitive" query option and does not<br />allow the user to set and control many important options. Possibly add a new<br />tab for these query options, which would read and write the results to the users<br />profile. This includes: casesensitivity, local search toggle, metacat search<br />toggle, and other relevant search options.</p> Bug #232 (Resolved): [RFE] saved querieshttps://projects.ecoinformatics.org/ecoinfo/issues/2322001-05-08T18:40:53ZMatt Jonesjones@nceas.ucsb.edu
<p>It would be pretty easy to implemet a "saved queries" feature where a user could<br />save a pathquery document to disk so that it could be rerun at a later date. We<br />should probably save all of the queries in "lib/saved-queries" and then update<br />the lib/config.xml file with a <savedquery file="q001.xml>Title of the<br />query</savedquery> entry for each of the saved queries. The title would be<br />cached in the config file so that the Search menu could display menu items for<br />all of the saved queries without having to read each of the query files. When<br />the menu item is fired, we would retrieve the pathquery from disk and execute<br />it, bypassing the QueryDialog. Note that because pathqueries are XML documents,<br />it would also be possible to save these on the network using Metacat, possibly<br />as part of a user profile scheme.</p> Bug #223 (Resolved): Build installers for Windows, Mac, Linuxhttps://projects.ecoinformatics.org/ecoinfo/issues/2232001-04-10T00:44:13ZMatt Jonesjones@nceas.ucsb.edu
<p>Need to build installers for Windows, Mac, and Linux. These should not require<br />Java (they should be able to install Java as part of the install process). And<br />they should not have a lot of difficult to meet dependencies (like<br />InstallAnywhere's use of an Applet). They should be simple executables for the<br />target platform that allows the user to 1) install Java if needed, and 2)<br />install the program (with any application configuration that is needed) without<br />the need for following instructions in a README file.</p> Bug #222 (Resolved): Test Morpho and the Morpho Installer on MacOS and MacOS X.https://projects.ecoinformatics.org/ecoinfo/issues/2222001-04-10T00:41:33ZMatt Jonesjones@nceas.ucsb.edu
<p>Need to test Morpho and the Morpho Installer on MacOS and MacOS X.</p> Bug #206 (Resolved): need help system for morphohttps://projects.ecoinformatics.org/ecoinfo/issues/2062001-04-09T21:58:12ZMatt Jonesjones@nceas.ucsb.edu
<p>Need a help system for morpho. This should include some level of<br />context-sensitive help, a supplemented index, a glossary, and access to metadat<br />a standards documentation. This initially can be implemented as just an HTML<br />help system with the existing morpho documentation, but we may want to<br />eventually migrate to the Java Help system.</p>
<p>Dan has agreed to implement this, and Mark and Elizabeth to review it.</p> Bug #166 (Resolved): Update options handlinghttps://projects.ecoinformatics.org/ecoinfo/issues/1662000-10-31T16:46:09ZDan Higginshiggins@nceas.ucsb.edu
<p>Add XML based system for configuration/options setting and storing</p> Bug #165 (Resolved): taxonomic search facilityhttps://projects.ecoinformatics.org/ecoinfo/issues/1652000-10-31T16:44:01ZDan Higginshiggins@nceas.ucsb.edu
<p>Add at least simple taxonomic and spatial search capability</p> Bug #123 (Resolved): saved resultsets, cached documentshttps://projects.ecoinformatics.org/ecoinfo/issues/1232000-09-20T18:28:05ZMatt Jonesjones@nceas.ucsb.edu
<p>This is a general feature enhancement request that would allow for a user to run <br />a query against the catalog, and then save the resultset and cache all of the <br />objects associated with the resultset so that the user can work offline with all <br />of the relevant data. This is similar to Internet Explorer's ability to save <br />whole web sites for offline browsing.</p> Bug #116 (Resolved): metadata extraction for text fileshttps://projects.ecoinformatics.org/ecoinfo/issues/1162000-09-20T18:06:33ZMatt Jonesjones@nceas.ucsb.edu
<p>Need data set parser module integrated as a new componenet of dmanclient. This <br />parser would take an ASCII data file as input and parse it to determine its <br />structure, and then output an XML document (initially compatible with eml-file <br />and eml-variable) that would be openened in the metadata editor for review and <br />revision by the scientist.</p> Bug #115 (Resolved): need short-term dataset parser implementationhttps://projects.ecoinformatics.org/ecoinfo/issues/1152000-09-20T18:03:32ZMatt Jonesjones@nceas.ucsb.edu
<p>Need a data set parser to extract relevant file- and variable- information for <br />MARINE datasets. The parser should generate XML output that is suitable for <br />inclusion in eml-file and eml-variable metadata modules, and that will help <br />speed data entry for the MARINE datasets. This may be implemented in SAS.</p>