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From 01/09/2010 to 02/07/2010

02/07/2010

10:58 PM Bug #4738: Discard Annotation changes when datapackage window is closed
this is done now. just need to figure out when and how to warn when discarding the changes ben leinfelder
10:55 PM Bug #4771 (New): Decide permission policy for Annotations and Ontologies in Metacat
My proposal:
-public read on all Ontologies
-same permissions as EML for Annotations that annotate that EML
This...
ben leinfelder
10:48 PM Bug #4770 (New): Load Annotations from Metacat in Annotation plugin
Currently only locally stored annotations are loaded (at startup when the Annotation Plugin is initialized).
For a l...
ben leinfelder
10:41 PM Bug #4769 (New): Save annotations to network
Currently only supporting saving Annotations to local store
This has implications for loading Annotations as well si...
ben leinfelder
10:30 PM Bug #4768: UI for managing annotation ontologies
Soe more background (from an email I sent a while ago):
-----
I went to use the ontology browser in Morpho and realiz...
ben leinfelder
10:29 PM Bug #4768 (Resolved): UI for managing annotation ontologies
There is a section of the config.xml that contains ontology URI (and URL) mappings for ontologies we want to load whe... ben leinfelder

02/05/2010

03:41 PM Bug #4737: Provide menu option for removing Observations and Measurements
If a user wants to remove an observation that is context for other observations, I think the system could prompt the ... Shawn Bowers
02:34 PM Bug #4737: Provide menu option for removing Observations and Measurements
Grouped the options, hopefully it's clear what they do and what the implications are.
Decided to require the Context...
ben leinfelder
11:59 AM Bug #4737: Provide menu option for removing Observations and Measurements
When we remove an Observation...
-do we want to remove the Context it might be providing for another Observation?
-d...
ben leinfelder
04:37 PM Bug #4737 (Resolved): Provide menu option for removing Observations and Measurements
If you add an observation annotation there is no way to remove it - you can only edit it and remove all of the classe... ben leinfelder
02:42 PM Bug #4724: Mark data package as changed when Annotation is edited
adding a dependency for the annotations being discarded when the window closes. I'm not sure what should rely on what... ben leinfelder
02:37 PM Bug #4738: Discard Annotation changes when datapackage window is closed
Now listening for the window to close.
If the window closes, then we throw away any unsaved changes and use whatever ...
ben leinfelder
04:40 PM Bug #4738 (Resolved): Discard Annotation changes when datapackage window is closed
Because the SMS library keeps it's annotations in memory, you can actually close the data package after editing the a... ben leinfelder
10:35 AM Bug #4739: Re-Reorder after editing Annotation
now if you reorder the table once, it will remain "reordered" until you close the window. ben leinfelder
04:48 PM Bug #4739 (Resolved): Re-Reorder after editing Annotation
Whenever the annotation is edited, the annotation table gets updated and returned to it's original column order.
If ...
ben leinfelder
09:14 AM Bug #4718: Include help text on the Annotation wizard page
reopen if there are additional comments to make on the help text. ben leinfelder
09:13 AM Bug #4732: Directly select/edit the Annotation classes from the table
hey, look at that, this is done. ben leinfelder

02/04/2010

03:41 PM Bug #4732: Directly select/edit the Annotation classes from the table
Now if you don't select a class in the ontology browser (actually it's not that easy to do since you have to cntrl+cl... ben leinfelder
03:02 PM Bug #4732: Directly select/edit the Annotation classes from the table
Double click on the cell you want to edit:
-if there's an existing value, the ontology browser opens to that selected...
ben leinfelder
08:21 AM Bug #4732 (Resolved): Directly select/edit the Annotation classes from the table
Instead of going through the motion of selecting a column, bringing up the annotation page, then bringing up the onto... ben leinfelder
05:20 PM Bug #4718: Include help text on the Annotation wizard page
i've added a snippet of Shawn's explanation to the main UI page for annotations, and then put more text on a Help pop... ben leinfelder

02/03/2010

11:56 AM Bug #4717: Grey-out Annotation menu options when not-applicable
Here are the current scenarios:
1. When you first open Morpho (no data package is open)
-Only Search Annotations... i...
ben leinfelder
09:43 AM Bug #4718: Include help text on the Annotation wizard page
The measurement "iskey" attribute in the annotation syntax is a constraint, much like (primary) key constraints in re... Shawn Bowers
08:21 AM Bug #4718: Include help text on the Annotation wizard page
Added help for the class selection items (Entity, Char, Standard, Protocol).
I'd like some guidance on the Observati...
ben leinfelder

02/02/2010

03:51 PM Bug #4724: Mark data package as changed when Annotation is edited
I've been thinking that the annotation will eventually supplement or supplant the current EML attribute description p... Matt Jones
03:42 PM Bug #4724: Mark data package as changed when Annotation is edited
This is part of a bigger issue - how to balance the user's need to have all the underlying structure hidden with the ... Margaret O'Brien
01:32 PM Bug #4724 (New): Mark data package as changed when Annotation is edited
Currently you can make as many changes as you want to an Annotation without ever changing the EML data package that i... ben leinfelder
12:33 PM Bug #4720: Automatically generate Measurement and Observation labels
disabling the text field for the labels - now observations and measurements will be auto labeled ben leinfelder
11:27 AM Bug #4719: Filter the Ontology Browser by superclass
Now only the subclasses of the Annotation class being collected are shown in the tree.
Note: this involves regenerati...
ben leinfelder

02/01/2010

01:52 PM Bug #4720 (Resolved): Automatically generate Measurement and Observation labels
It's more of a burden than a feature to have to type in a custom label for your observation or measurement at this po... ben leinfelder
01:49 PM Bug #4719 (Resolved): Filter the Ontology Browser by superclass
The Ontology Browser is reused for many fields (Entity, Characteristic, Standard, Protocol, Relationship). Rather tha... ben leinfelder
01:46 PM Bug #4718 (Resolved): Include help text on the Annotation wizard page
Each field/checkbox/class selection widget should have a brief explanation about what is expected input (similar to t... ben leinfelder
01:44 PM Bug #4717 (Resolved): Grey-out Annotation menu options when not-applicable
If a column is currently selected that is not part of an Observation, it makes no sense to add or remove a Context fr... ben leinfelder

01/15/2010

09:58 AM Bug #4675 (New): EML:DataTable:Annotation cardinality
Currently we have the following relationships:
(1) EML Datapackage
(1...n) DataTables in the Datapackage
(1) Annot...
ben leinfelder
 

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