Activity
From 10/27/2003 to 11/25/2003
11/24/2003
- 11:24 AM Bug #1227 (Resolved): form to import graphics
- need a form to import graphics. Could also import a comma separated list of
observation accessionCodes and URL for ... - 11:21 AM Bug #1226 (New): Rectification: need a "possible duplicate plot" alert for incoming plots
- When plots are imported, need to check the system to see if there are other
plots already in vegbank which may be th... - 11:18 AM Bug #1225: Load USDA/ITIS 2004 plants
- bug 701 deals with the link between 2 years of PLANTS. Use the methods
described and devised there to accomplish lin... - 11:16 AM Bug #1225 (Resolved): Load USDA/ITIS 2004 plants
- we need to load a new version of USDA/ITIS plants. These need to be linked into
older concepts, in a manner as yet ... - 11:15 AM Bug #1224 (Resolved): Create VegBranch Lite, revise VegBranch
- Create simplified version of VegBranch, perhaps in VegBranch, but just with many
options hidden. - 11:14 AM Bug #1223 (Resolved): Index to vegbank fields, and linkage to fields in VegBranch loading module
- this should help users figure out where there data go in VegBranch
- 11:11 AM Bug #1222 (Resolved): Develop Mock-up of Prosal-Peer Review machine
- This is also called the "sausage machine" and the overview is shown at the above
URL. - 10:38 AM Bug #909: [1730] Business Rules:Confidentiality of private lands
- new model handles this. DB management should be allowed highest permissions,
including changing embargoed status of ... - 10:06 AM Bug #820: Revisions: edit plots, cite them at a time, view them as they were before revisions
- *** Bug 819 has been marked as a duplicate of this bug. ***
- 10:06 AM Bug #820: Revisions: edit plots, cite them at a time, view them as they were before revisions
- *** Bug 818 has been marked as a duplicate of this bug. ***
- 10:06 AM Bug #819: Revision:review forms
- 1
*** This bug has been marked as a duplicate of 820 *** - 10:06 AM Bug #818: [966] Revision:connect and implement form
- 1 bug for revisions
*** This bug has been marked as a duplicate of 820 *** - 10:05 AM Bug #893: [1413] TurboVeg export:define and develop XML translation
- 1
*** This bug has been marked as a duplicate of 874 *** - 10:05 AM Bug #874: TurboVeg export
- *** Bug 893 has been marked as a duplicate of this bug. ***
- 10:04 AM Bug #874: TurboVeg export
- *** Bug 892 has been marked as a duplicate of this bug. ***
- 10:04 AM Bug #892: [1416] TurboVeg export:test
- 1
*** This bug has been marked as a duplicate of 874 *** - 10:00 AM Bug #738: TurboVeg plot import (TV-XML to VB-XML by our stylesheet)
- *** Bug 737 has been marked as a duplicate of this bug. ***
- 09:55 AM Bug #738: TurboVeg plot import (TV-XML to VB-XML by our stylesheet)
- *** Bug 736 has been marked as a duplicate of this bug. ***
- 09:55 AM Bug #738: TurboVeg plot import (TV-XML to VB-XML by our stylesheet)
- *** Bug 735 has been marked as a duplicate of this bug. ***
- 10:00 AM Bug #737: [550] Data loader plugins:TurboVeg plots
- one TV bug is plenty
*** This bug has been marked as a duplicate of 738 *** - 09:58 AM Bug #846: dataset/datacart Manager
- would be nice to have this sooner: too much to do
- 09:58 AM Bug #845: Query manager - list of past queries
- would be nice to have this sooner: too much to do
- 09:55 AM Bug #736: [553] Data loader plugins:TurboVeg plots:Finalize TurboVeg (TV) XML
- one TV bug
*** This bug has been marked as a duplicate of 738 *** - 09:55 AM Bug #735: [556] Data loader plugins:TurboVeg plots:stylesheet (TV XML to VB XML)
- one TV bug
*** This bug has been marked as a duplicate of 738 *** - 09:54 AM Bug #1190: Change User Profile seems to be broken
- *** Bug 1119 has been marked as a duplicate of this bug. ***
- 09:53 AM Bug #1190: Change User Profile seems to be broken
- Also need to deal with cookie and main menu greeting if email address changed.
From bug 1119 (dupl of this):
When th... - 09:54 AM Bug #1119: Changing email address doesn't affect cookie email address
- these contents pasted in 1190
*** This bug has been marked as a duplicate of 1190 *** - 09:46 AM Bug #721: [360] Mechanism to add new plants:correlations-a
- one correlation bug is enough
*** This bug has been marked as a duplicate of 720 *** - 09:46 AM Bug #720: Party Perspective Managment (plant/comm):General interface to allow
- *** Bug 721 has been marked as a duplicate of this bug. ***
- 09:39 AM Bug #774: Build validation package:Check required fields in XML schema
- done in XSD. What isn't handled by it, bug 793 captures.
- 09:37 AM Bug #1050: validation & recitification without loading plots procedure
- this is perhaps best done by loading to vegtest. Rectification without loading
will be hard. - 09:32 AM Bug #1050: validation & recitification without loading plots procedure
- *** Bug 775 has been marked as a duplicate of this bug. ***
- 09:36 AM Bug #793: Build validation package:Default values for some fields (if null)
- Also, while default values are being checked, other "pseudo-required" fields
could be checked. By this, I mean the c... - 09:32 AM Bug #775: Build validation package:Develop & implement validation rules
- some of this bug is fixed by xsd which checks for required fields, the rest of
this is contained in bug 1050
*** Thi...
11/22/2003
- 12:38 AM Bug #1121: Large plant queries cause Out of Memory error
- not sure why this bug is mine.
- 12:35 AM Bug #840: [1070] Document the user database
- vegbank 1.0.2 contains the users db
- 12:32 AM Bug #1118: strutify the certification form and possibly change the way log-in/cookie are done
- make the system more robust
- 12:30 AM Bug #856: users specify view of plots and fields they want
- high level of user customization: user selects fields to view on plots
- 12:29 AM Bug #787: [825] Load tree data:Test tree data loading
- trees are part of XML import
- 12:26 AM Bug #837: [1100] Intellectual Property:Clock for loss of embargo
- 1.0.2 provides clock for embargo, expiration date required
- 12:24 AM Bug #919: Advanced IP system, user-specific filtering of data
- the thing that is high priority here is ensuring that embargoed plots cannot be
viewed. Building forms to request an... - 12:22 AM Bug #919: Advanced IP system, user-specific filtering of data
- bug 835 = form for owner to provide permission
- 12:21 AM Bug #838: [1090] Intellectual Property:Specify whether embargo
- in XML stream on import, whether there is an embargo
- 12:20 AM Bug #778: Build validation package - overall plan
- use xsd
- 12:17 AM Bug #822: Annotation: view current notes on data + create notes
- need for rectification
- 12:17 AM Bug #821: Notes: add new note form, link from views of things to note
- need this for rectification
- 12:12 AM Bug #878: PCord export
- *** Bug 877 has been marked as a duplicate of this bug. ***
- 12:12 AM Bug #877: [1393] PCord export:test
- 1
*** This bug has been marked as a duplicate of 878 *** - 12:11 AM Bug #905: Business Rules:New taxa of plants and communities
- handled in other bugs
*** This bug has been marked as a duplicate of 723 *** - 12:11 AM Bug #723: Mechanism to add new plants (one plant at a time) - web
- *** Bug 905 has been marked as a duplicate of this bug. ***
- 12:08 AM Bug #867: [1350] Export provides ALL data except confidential
- XML now exports all data in vegbank. Authentication for viewing plots and
downloading the data handled elsewhere. - 12:07 AM Bug #841: Limit number of plots uploaded based on certification:test and eval
- we should create and store 2 userPreferences that they cannot control, or at
least can't override: (maybe add a field... - 12:01 AM Bug #716: Mechanism to add new plants:Insert business rules
- can't load plants via web yet. This applies more to that situation. VegBranch
checks for rules before exporting to XML.
11/21/2003
- 11:54 PM Bug #677: Web:Removed broken links and links to non-existent functionality
- done
- 11:52 PM Bug #1074: consolodate all party tables onto one
- done in vegbank 1.0.2
- 11:52 PM Bug #1049: need XML uploader to work with Usage as child of Status
- Implementation field, this has been added for ease of getting at status from usage
- 11:50 PM Bug #771: Loader rectification tools:Picklists: closed (and open?)
- *** Bug 770 has been marked as a duplicate of this bug. ***
- 11:49 PM Bug #771: Loader rectification tools:Picklists: closed (and open?)
- *** Bug 769 has been marked as a duplicate of this bug. ***
- 11:50 PM Bug #770: [673] :Loader rectification tools:Picklists-b
- 1
*** This bug has been marked as a duplicate of 771 *** - 11:49 PM Bug #769: [676] :Loader rectification tools:Picklists-c
- 1
*** This bug has been marked as a duplicate of 771 *** - 11:48 PM Bug #763: Loader rectification tools:NamedPlace (from place)
- *** Bug 762 has been marked as a duplicate of this bug. ***
- 11:47 PM Bug #763: Loader rectification tools:NamedPlace (from place)
- *** Bug 761 has been marked as a duplicate of this bug. ***
- 11:48 PM Bug #762: [636] :Loader rectification tools:PlaceNames-c
- 1
*** This bug has been marked as a duplicate of 763 *** - 11:47 PM Bug #761: [633] :Loader rectification tools:PlaceNames-b
- 1
*** This bug has been marked as a duplicate of 763 *** - 11:46 PM Bug #759: Loader rectification tools: PlantConcept (from TaxonInterp and TaxonAlt)
- *** Bug 758 has been marked as a duplicate of this bug. ***
- 11:45 PM Bug #759: Loader rectification tools: PlantConcept (from TaxonInterp and TaxonAlt)
- *** Bug 756 has been marked as a duplicate of this bug. ***
- 11:46 PM Bug #758: [643] :Loader rectification tools:TaxonInterpretations-b
- 1
*** This bug has been marked as a duplicate of 759 *** - 11:45 PM Bug #756: [646] :Loader rectification tools:TaxonInterpretations-c
- 1
*** This bug has been marked as a duplicate of 759 *** - 11:45 PM Bug #754: Loader rectification tools: References
- *** Bug 773 has been marked as a duplicate of this bug. ***
- 11:44 PM Bug #754: Loader rectification tools: References
- *** Bug 772 has been marked as a duplicate of this bug. ***
- 11:45 PM Bug #773: [666] :Loader rectification tools:Citations-c
- 1
*** This bug has been marked as a duplicate of 754 *** - 11:44 PM Bug #772: [663] :Loader rectification tools:Citations-b
- 1
*** This bug has been marked as a duplicate of 754 *** - 11:43 PM Bug #760: Loader rectification tools: CommConcepts (from CommInterp)
- *** Bug 757 has been marked as a duplicate of this bug. ***
- 11:42 PM Bug #760: Loader rectification tools: CommConcepts (from CommInterp)
- *** Bug 755 has been marked as a duplicate of this bug. ***
- 11:43 PM Bug #757: [653] :Loader rectification tools:CommunityInterpretations-b
- 1
*** This bug has been marked as a duplicate of 760 *** - 11:42 PM Bug #755: [656] :Loader rectification tools:CommunityInterpretations-c
- 1
*** This bug has been marked as a duplicate of 760 *** - 11:40 PM Bug #746: Loader rectification tools:Party
- *** Bug 745 has been marked as a duplicate of this bug. ***
- 11:39 PM Bug #746: Loader rectification tools:Party
- *** Bug 744 has been marked as a duplicate of this bug. ***
- 11:40 PM Bug #745: [623] :Loader rectification tools:Party-b
- one
*** This bug has been marked as a duplicate of 746 *** - 11:39 PM Bug #744: [626] :Loader rectification tools:Party-c
- one is enough
*** This bug has been marked as a duplicate of 746 *** - 11:38 PM Bug #748: Systematic approach to rectification
- one of 5 major bugs (or so) and thus critical and highlighted red.
We will use the notes tables to populate informat... - 11:23 PM Bug #719: manage plants you own
- *** Bug 717 has been marked as a duplicate of this bug. ***
- 11:11 PM Bug #719: manage plants you own
- Irregular taxa now handled without adding new plants, this becomes much less
important - 11:23 PM Bug #717: [375] Mechanism to add new plants:manage plants you own-b
- one plant management bug is enough
*** This bug has been marked as a duplicate of 719 *** - 11:12 PM Bug #747: [615] :Loader rectification tools-b
- redundant and useless bug
- 11:00 PM Bug #1077: document in CVS: Preload the database with standard methods, references, journals
- in src/sql for now.
- 10:58 PM Bug #1221 (Resolved): Systematic solution to querying data
- We need to figure out a systematic way of easily creating new queries to query
data using fields that can somewhat e... - 10:50 PM Bug #743: [520] Data loader plugins:XML plots:Values for required fields missing
- duplicate!
*** This bug has been marked as a duplicate of 739 *** - 10:50 PM Bug #739: QA for New XML (1.0.2) loading (Lee), then Fix errors in loading process (Farrell/Anderson)
- *** Bug 743 has been marked as a duplicate of this bug. ***
- 09:15 PM Bug #739: QA for New XML (1.0.2) loading (Lee), then Fix errors in loading process (Farrell/Anderson)
- need to do this again for new XML
- 10:34 PM Bug #919: Advanced IP system, user-specific filtering of data
- Bob, please read through this bug and my long-winded descriptions and then, if
OK, please pass along to Mark. - 10:33 PM Bug #919: Advanced IP system, user-specific filtering of data
- ------------------------------------------------------------
--------- OK so a user wants to request permission, how ... - 10:26 PM Bug #919: Advanced IP system, user-specific filtering of data
- ----------------------------------------------------------------------------
---- THE PLOT IS CONFIDENTIAL TO SOME DE... - 10:20 PM Bug #919: Advanced IP system, user-specific filtering of data
- One of the 5 major (critical on bugzilla so higlighted red) bugs:
We must implement the new intellectual property de... - 09:24 PM Bug #919: Advanced IP system, user-specific filtering of data
- not critical bug to be highlighted in red, but very important
- 09:59 PM Bug #891: QA NPS plots on vegbank
- we actually want 2000 plots in vegbank by end of Feb. Don't need to be NPS
plots. Perhaps some of the failed NPS pl... - 09:57 PM Bug #883: Export to two flat ASCII tables with default attributes:test
- ML needs to test this and if so, confirm&close this bug and 864
- 09:55 PM Bug #1220: Need systematic approach to viewing all data in database
- *** Bug 847 has been marked as a duplicate of this bug. ***
- 09:22 PM Bug #1220: Need systematic approach to viewing all data in database
- Making the 5 "major" bugs critical so that bugzilla highlights them in red, how
nice. - 09:19 PM Bug #1220 (Resolved): Need systematic approach to viewing all data in database
- This could be done with XML-XSL, but we would prefer give it a shot with
javabeans which are more efficient. Curren... - 09:55 PM Bug #847: evaluate: User view & output stylesheets
- this bug has been passed by the better and higher goals of the very humble bug 1220
*** This bug has been marked as ... - 09:53 PM Bug #1140: Better delimit results of certification request so they are more readable
- Much progress was made on this bug. The request was sent to panel@vegbank.org,
which is great. The format looked go... - 09:50 PM Bug #863: Evaluate: Simple Query (rewrite views for query)
- I think this query is great now. Time to resolve this bug. Improvement
suggestions can be made on bugs 1191, 860 - 09:29 PM Bug #833: Management page needed with full ability to modify accounts
- *** Bug 831 has been marked as a duplicate of this bug. ***
- 09:29 PM Bug #831: [1016] Management accounts??
- one is enough
*** This bug has been marked as a duplicate of 833 *** - 09:28 PM Bug #675: Evaluate Tutorial
- great progress has been made with this. There is now a place to put both pop-up
help html files as well as a more co... - 09:25 PM Bug #1014: Cover methodology : foliar or canopy cover - add field?
- done, added to obseration in vegbank 1.0.2
- 09:13 PM Bug #1169: Upgrade VegBranch to new 1.0.2 Vegbank data model
- model changes mean VegBranch changes. Need to perhaps have a list for VegBranch
updates, as users "out there" with V... - 09:10 PM Bug #824: Make website deal with user tables in vegbank, not framework
- Once again changing the nature and summary of this bug. Here is the task of
making the website work with the correct... - 09:06 PM Bug #1219 (Resolved): VegBank 1.0.2 model - implemented
- We need to upgrade to version 1.0.2 for vegbank.
The model needs to be finalized (done: see Nov 21 version of db_m... - 08:56 PM Bug #1218 (Resolved): Get really new XML importing (version 1.0.2), allow zipped
- Update the current loader to import the new XML. Included in this bug is to get
compressed files to unzip and load.
11/12/2003
- 04:17 PM Bug #1140: Better delimit results of certification request so they are more readable
- Don F-L has noted that the end of the cert request is a bit tricky to read. It
currently looks like this:
nvcExpRegi... - 10:30 AM Bug #824: Make website deal with user tables in vegbank, not framework
- I see no problems with the ERD id=89 particularily in relation to user,
certification, userPermissions and embargo, u...
11/11/2003
- 02:15 PM Bug #1022: Eval: Form to calculate summary of multiple plots
- 2 different versions of this:
1) show plots side by side in same table
2) show summary stats (averages) across tables - 02:13 PM Bug #1169: Upgrade VegBranch to new 1.0.2 Vegbank data model
- *** Bug 765 has been marked as a duplicate of this bug. ***
- 02:13 PM Bug #765: [705] :Complete ACCESS tool for input:test and evaluate VegBranch
- QA QC of VegBranch also another bug
*** This bug has been marked as a duplicate of 1169 *** - 02:12 PM Bug #833: Management page needed with full ability to modify accounts
- Page needed where managers (highest cert. level) can:
view all users
certify users
delete plots
delete users
restart... - 02:09 PM Bug #702: Enter basic PLANTS:Evalute implementation of PLANTS data-c
- basic plants are in VegBank and loaded properly
- 02:07 PM Bug #823: Annotation: query for notes
- Form to allow users to find notes that may interest them, such as from a
particular person or with particular text or... - 02:06 PM Bug #822: Annotation: view current notes on data + create notes
- Need to incorporate views of notes in views of other data in the system
- 02:06 PM Bug #821: Notes: add new note form, link from views of things to note
- Need a form to add notes to data. Should be linked from views of other data,
such as plot-view, so that user can req... - 02:03 PM Bug #860: Flexible plot query, user powered: DEMO
- *** Bug 859 has been marked as a duplicate of this bug. ***
- 02:03 PM Bug #860: Flexible plot query, user powered: DEMO
- *** Bug 858 has been marked as a duplicate of this bug. ***
- 02:03 PM Bug #859: [1273] Nested and advanced query:revise more
- one bucket for nested query is enough
*** This bug has been marked as a duplicate of 860 *** - 02:03 PM Bug #858: [1276] Nested and advanced query:implement
- one bucket for nested query is enough
*** This bug has been marked as a duplicate of 860 *** - 02:00 PM Bug #701: Enter 2 years of USDA PLANTS:Possible conversion to ITIS standards
- load 2nd year of USDA PLANTS and link to current plants in VegBank (2002)
- 01:49 PM Bug #915: Performance tuning
- need to be working on this sooner. Lots of things go under this heading.
Caching. More memory. Other ideas to imp... - 12:15 PM Bug #824: Make website deal with user tables in vegbank, not framework
- more info, akin to data-dictionary on its way
- 12:13 PM Bug #824: Make website deal with user tables in vegbank, not framework
- Mark, I'll take this bug for now, with focus on model change implications.
Sounds like the certification email is wo... - 12:11 PM Bug #824: Make website deal with user tables in vegbank, not framework
- *** Bug 836 has been marked as a duplicate of this bug. ***
- 12:11 PM Bug #836: database redesign for Intellectual Property Table for permissions for embargoed data
- changes to the model will be posted to bug 824, including changes for
intellectual property
*** This bug has been ma...
11/10/2003
- 03:48 PM Bug #1114: Logging system needs to be upgraded
- let me at 'em
11/09/2003
- 05:04 PM Bug #879: View a plot with simple URL
- I confirm fix.
- 05:03 PM Bug #1194: vegtest build targets
- I confirm this
11/08/2003
- 05:03 PM Bug #1184: Need process for deciding on certification requests
- Listserv for this feature exists!
See http://hyperion.nceas.ucsb.edu/vegbank/mailman/listinfo/panel
for details on... - 11:46 AM Bug #824: Make website deal with user tables in vegbank, not framework
- Mark, your comments above I agree with. The "what do these levels mean" link is
perhaps being screwed up my renegade ...
11/07/2003
- 02:37 PM Bug #824: Make website deal with user tables in vegbank, not framework
- If a user is not logged in, fills out entire form, submits, message says, "log
in" and the form data is lost. Bad ne...
11/05/2003
- 05:18 PM Bug #788: Load tree-related data
- Loads if using XML
- 05:17 PM Bug #1114: Logging system needs to be upgraded
- Mark has already started work on this so reassigning
- 05:14 PM Bug #1120: log out doesn't appear to work
- Logout removes cookie from client now.
- 05:12 PM Bug #973: Downloaded plot is from VegBank, not tekka
- Works now.
- 05:10 PM Bug #779: Build validation package:Compare values against picklists
- Implicitly happens when XML validated against the schema. Future work regards
depends on building rectification system. - 05:08 PM Bug #869: XML export:implement corrections
- Using the new XML so fixed
- 01:26 PM Bug #864: Two flat ASCII tables with default attributes
- HTML export removed
Reports split into two files if entire plot requested and then ZIPed with DOS
line-endings
Unic... - 01:10 PM Bug #679: Split help into separate pages; not single file with anchors
- done
- 10:00 AM Bug #1194: vegtest build targets
- vegtest.vegbank.org is up and running.
10/30/2003
- 07:17 PM Bug #739: QA for New XML (1.0.2) loading (Lee), then Fix errors in loading process (Farrell/Anderson)
- Some aspects of #5 addressed ...
Dates now work,
Children of Stratumeethod exported ( and coverMethod )
Format of P... - 12:45 PM Bug #739: QA for New XML (1.0.2) loading (Lee), then Fix errors in loading process (Farrell/Anderson)
- Almost no errors! REally great loader. Need to test most diverse plots, still.
First analysis:
missing in export:
... - 07:12 PM Bug #870: New XML export and import into the VegBank system
- This is complete
- 12:48 PM Bug #807: Interpret taxon in extant plot
- no time left. These must sadly be pushed back to version 1.0.0
- 12:48 PM Bug #764: Develop a system to export Vegbranch compatible data
- no time left. These must sadly be pushed back to version 1.0.0
- 12:48 PM Bug #804: Interpret community in extant plot
- no time left. These must sadly be pushed back to version 1.0.0
10/29/2003
- 04:38 PM Bug #1181: Forgot my password email doesn't work
- The email didn't work when users did not enter their first and last names, which
doesn't really add much value anyway...
10/28/2003
- 06:02 PM Bug #1148: quickly resolvable bug: taxonCover not appearing on plot view
- Not so quickly, but resolved now and tested by mlee.
- 05:12 AM Bug #1171: redesign header/footer/frontpage
- no time before Nov1
10/27/2003
- 03:40 PM Bug #1194 (Closed): vegtest build targets
- The build system must support deploy-vegtest and dist-vegtest in each of the
myriad build.xml files scattered across...
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