Ecoinformatics Redmine

02/23/2011

05:02 PM Kepler Bug #5319: The workflow which archive sensor data into metacat can upload incorrect data set when new data is coming

Today, i fixed the issue that "last update" wasn't persistent.
I ran the workflow again and found:
First time:
Datase... Jing Tao

04:55 PM Kepler Bug #5235: Scheduler GUI can schedule any wf (even local ones).

It can schedule a local workflow. Jing Tao

11:07 AM Kepler Bug #5320 (Resolved): Get "could not find entity 1876 in parameter table" when run the dataturbineToMetacat workflow

This is the second time to see the error. But I didn't figure out the pattern.
<jing> ERROR: could not find entity 1... Jing Tao

02/22/2011

04:54 PM Kepler Bug #5319: The workflow which archive sensor data into metacat can upload incorrect data set when new data is coming

I use sensor simulator created data with timestamp from 2011-02-22 04:32:02 to2011-02-22 04:33:00.
Then I ran the w... Jing Tao

04:20 PM Kepler Bug #5319 (Resolved): The workflow which archive sensor data into metacat can upload incorrect data set when new data is coming

I used sensor simulator to create data set, then killed the simulator. It created data with timestamp from 2011-02-2... Jing Tao

02/14/2011

02:48 PM Metacat Bug #5262: EML document owner can't read the document

Hrrm, it seems our code doesn't trim the username.
In AuthLdap.authenticateTLS:
I added a information line to displ... Jing Tao

01:47 PM Metacat Bug #5262: EML document owner can't read the document

Hi, Matt:
Yes, the user name with extra space can login. The username field in EcogridWriter is used for login. The ... Jing Tao

11:42 AM Metacat Bug #5262: EML document owner can't read the document

Somehow, in EcogridWriter actor, author put an extra space after uid=kepler,o=unaffiliated,dc=ecoinformatics,dc=org.
... Jing Tao

02/11/2011

05:12 PM Kepler Bug #5303 (Resolved): The workflow which archive sensor data into metacat can upload data even no new data was generated

I used sensor stimulator and span to generate some data into a Dataturbine server.
Then i terminated the sensor stim... Jing Tao

05:01 PM Kepler Bug #5218: Create sensorML string

We can create valid sensorML document and metacat can accept it.
The sensorML looks like:
<sml:SensorML
xmlns:sml="... Jing Tao

10:46 AM Metacat Bug #5300: SchemaLocationResolver fails to download included xsd files

Add a new class XMLSchemaPaser which can extract the included schema information.
In XMLSchemaService class, add a ne... Jing Tao

02/09/2011

02:37 PM Metacat Bug #5300: SchemaLocationResolver fails to download included xsd files

Here is a way probably resolve this issue:
In edu.ucsb.nceas.metacat.service.XMLSchemaService lcass, we will add two... Jing Tao

01:40 PM Metacat Bug #5300 (Resolved): SchemaLocationResolver fails to download included xsd files

I am trying to insert an eml document with embedded sensorML into metacat.
But i get the error:
knb 20110209-11:20:... Jing Tao

02/07/2011

11:44 AM Metacat Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/

It turns out that Metacat is using a customized properties file management system.It makes the properties file more r... Jing Tao

02/04/2011

05:31 PM Metacat Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/

in above comment, can = can NOT :) Jing Tao

05:29 PM Metacat Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/

The first issue in above comment relates to the second one. When metacat initializes the db service, it can recognize... Jing Tao

04:54 PM Metacat Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/

I will add the target to check the database.
I added two targets into the build.xml. One will set configutil.* to be... Jing Tao

03:15 PM Metacat Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/

I just tested if we set:
configutil.propertiesConfigured=false
configutil.authConfigured=false
configutil.skinsConfig... Jing Tao

01:03 PM Metacat Bug #5294: Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/

<matt> another possibility would be to create a new target in the build that sets those properties explicitly for the... Jing Tao

11:54 AM Metacat Bug #5294 (New): Enable Junit test on http://dev-testing.dataone.org:8080/hudson/job/Metacat/

Currently in hudson test, the build will run "ant clean war" to verify the new commitment code would not break the bu... Jing Tao

01:20 PM Kepler Bug #5276: component search performance is poor

<?xml version="1.0"?>
<resultset>
<pagestart>0</pagestart>
<pagesize>0</pagesize>
<nextpage>1</nextpage>
<pre... Jing Tao

01:17 PM Kepler Bug #5229: Poor component search performance

duplicated bug Jing Tao

02/03/2011

05:12 PM EML Bug #5292 (New): Need to update xerces jar files in the lib

If we use the eml parser to validate an eml document with embedded sensorML document, it will complain that the senso... Jing Tao

04:01 PM Metacat Bug #5291: Need update xerces jar file

Here are what i did:
1) Removed the following files:
tao@pacific:~/project/metacat$ rm ./lib/spatial/geoserver/WEB-IN... Jing Tao

03:58 PM Metacat Bug #5291 (Resolved): Need update xerces jar file

xcerces 2.7 complains that the sensorML schema is invalid. However, xmlSpy and oxygen don't.
I tried to use xerces... Jing Tao

02/02/2011

01:12 PM Kepler Bug #4753: create gui for scheduled execution of sensor workflows on server

This a general bug. The specific bugs have been created and fixed. Jing Tao

01:11 PM Kepler Bug #5236: The list on the left panel of the scheduler should only show WF objects that can be scheduled.

Bug is fixed base the solution on comment 1. If we have any new suggestion, we can open another bug. Jing Tao

01:09 PM Kepler Bug #5235: Scheduler GUI can schedule any wf (even local ones).

When user tries to schedule a local workflow, it will be uploaded to the saving repository first. The functionality i... Jing Tao

01:08 PM Kepler Bug #4754: update metacat workflow execution scheduler

the scheduler server code stands alone in svn. We create scheduler-gui module in kepler Jing Tao

02/01/2011

05:13 PM Metacat Bug #5288 (Resolved): Metacat got "java.lang.OutOfMemoryError: PermGen space" after new geoserver update

Today, I updated my metacat source tree to get the changes on the geoserver part.
After installing the new Metaca... Jing Tao

01/28/2011

09:37 AM Kepler Bug #5284 (New): Set uploadToServer to be true at configuration.xml

When we set up kepler run engine, we always have to change the value from false to true. Why we set it to be false? I... Jing Tao

01/26/2011

01:57 PM Kepler Bug #5272: kepler 2.1 suite can not be started using 'ant run'

Another user tried to build kepler execution eninge base on kepler-2.1
but he get the same error. Jing Tao