ben leinfelder's activity
From 04/15/2014 to 05/14/2014
05/14/2014
- 12:04 PM Metacat Revision 8777 (metacat): use HttpClient to query orcid so I can easily set headers and such -- getting 503s from their production server when I test on dev.nceas...odd
- 11:43 AM Metacat Revision 8776 (metacat): adjust tests for production service -- more "real" information shows additional return values from the query.
- 09:18 AM Metacat Revision 8775 (metacat): switch to the production ORCID server for looking up orcid matches for our creators.
- add test to summarize how many creator matches we can actually find. https://projects.ecoinformatics.org/ecoinfo/issu...
05/13/2014
- 03:36 PM Metacat Revision 8774 (metacat): use a non-public rightsHolder for both EML and Annotation test documents now that the RDF subprocessor checks each annotation to see that it came from a user that as write permission for the object being annotated.
- 03:34 PM Metacat Revision 8773 (metacat): test for update using the updated EML file, not the original. Also add the SM to the shared map so that the indexing process can consult SM.accessPolicy when indexing annotations that assert things about those test documents.
- 03:32 PM Metacat Revision 8772 (metacat): ignore the metacat/solr comparator tests - they are one-offs.
- 03:31 PM Metacat Revision 8771 (metacat): change the hazelcast group name to be the default "metacat" instance so that the metacat-index tests pass without additional local configuration, at least when running a default metacat deployment.
05/12/2014
05/09/2014
05/08/2014
- 04:25 PM Metacat Revision 8768 (metacat): process all the returned annotation suggestions until we find one that is appropriately located in the subclass hierarchy for the given superclass.
- 04:23 PM Metacat Revision 8767 (metacat): use in-memory TDB dataset for querying annotations for indexing -- this comes with the same reasoning capabilities as the directory-based one, but has the benefit of not filling the directory with triples that will not be used again. prepping for d1 AHM
05/07/2014
- 11:16 PM Metacat Revision 8766 (metacat): pass around the object file path rather than the data stream so that multiple subprocessors can index the same object and not consume the stream before it gets to the next one. In preparation for extending the assertions stored in OREs. https://projects.ecoinformatics.org/ecoinfo/issues/6548
- 11:12 PM Metacat Revision 8765 (metacat): when indexing annotations directly, just use an in-memory triple store rather than TDB since we remove each graph as it is processed (and my TDB instance would get into the multi-GB range with a few runs, even if I removed the old models)
05/05/2014
05/02/2014
04/30/2014
- 03:47 PM Metacat Revision 8762 (metacat): add 'test' for indexing annotations without actually storing the RDF of the generated annotation.
- 03:46 PM Metacat Revision 8761 (metacat): only allow multiple values for multi-valued fields....
04/29/2014
- 05:21 PM Metacat Revision 8759 (metacat): use new method to override the CN URL when constructing a CNode instance. see https://redmine.dataone.org/issues/5142
- 04:55 PM Metacat Revision 8758 (metacat): use newer httpclient library so that Jena's dependency is met - this goes all the way back to d1_common/libclient needing to pull in the newer library.
- 04:54 PM Metacat Revision 8757 (metacat): first pass at direct EML->semantic index method. Still produces an RDF model, but does not persist it in Metacat, only in the triplestore. Allows us to re-run without adding stale RDF to the MN store.
- 04:52 PM Metacat Revision 8756 (metacat): allow multivalued fields to be indexed using the "fields" pass through.
04/24/2014
- 01:28 PM Metacat Revision 8748 (metacat): switch to use FIleUpload instead of O'Reilly COS library for handling chunked file uploads. https://projects.ecoinformatics.org/ecoinfo/issues/6517
- 01:26 PM Metacat Revision 8747 (metacat): forgot to check in the actual class: first pass at allowing admins to update DOI registration. This only acts on EML objects at the moment and is meant to illustrate one mechanism for updating the DOIs. https://projects.ecoinformatics.org/ecoinfo/issues/6530
04/23/2014
- 12:35 PM Metacat Revision 8746 (metacat): first pass at allowing admins to update DOI registration. This only acts on EML objects at the moment and is meant to illustrate one mechanism for updating the DOIs. https://projects.ecoinformatics.org/ecoinfo/issues/6530
- 10:19 AM Metacat Revision 8745 (metacat): correct the ORE lookup query syntax and add junit assertion to check that it continues to function as expected. https://projects.ecoinformatics.org/ecoinfo/issues/6529
04/22/2014
- 03:38 PM Metacat Revision 8744 (metacat): index the ORE after we submit the metadata for indexing. https://projects.ecoinformatics.org/ecoinfo/issues/6520
- 11:43 AM Metacat Revision 8743 (metacat): include BioPortal lookup for Entity matches using the data table description. TODO: only associate measurements to the entity observation if they apply.
04/21/2014
- 11:12 AM Metacat Revision 8742 (metacat): recompile with java 1.6 for compatibility with our servers.
04/17/2014
Also available in: Atom