Project

General

Profile

First Community Workshop

Venue

Goals

  • Develop ideas for larger synthesis across systems
  • Introduce scientists to the concept of workflow systems
  • Introduce scientists to open data and methods sharing
  • Gather requirements for collaboration tools that would allow scientists to use them and share data and workflows.

Participants

Ilkay Altintas, UC San Diego, altintas at sdsc.edu
Carl Boettiger, UC Davis, cboettig at gmail.com
Erica Christensen, Utah State, erica.christensen at weecology.org
Elsa Cleland, UCSD, ecleland at ucsd.edu
Scott Collins, U New Mexico, scollins at sevilleta.unm.edu
Sam Fey, Dartmouth, Samuel.B.Fey.GR at dartmouth.edu
Corinna Gries, U Wisconsin, cgries at wisc.edu
Lauren Hallett, Berkeley, lauren.m.hallett at gmail.com
Stan Harpole, Iowa State, harpole at iastate.edu
Dave Harris, UC Davis, harry491 at gmail.com
Matt Jones, UC Santa Barbara, jones at nceas.ucsb.edu
Sydney Jones, U New Mexico, syd at sevilleta.unm.edu
Julie Ripplinger, Arizona State University, julie.ripplinger at asu.edu
Andrew Rypel, WDNR, andrew.rypel at wisconsin.gov
David Seekell, UVa, das9xx at virginia.edu
Elizabeth Siddon, U. Alaska Fairbanks, ecsiddon at alaska.edu
Eric Sokol, Virginia Tech, sokole at vt.edu
Lizzie Wolkovitch, UCSD/Harvard, lizzie at biodiversity.ubc.ca, wolkovich at fas.harvard.edu

Agenda

Wednesday February 5, 2014
8:30 am - 9:00 am Welcome and introductions Corinna
9:00 am - 9:20 am Project overview Corinna, Scott, Matt
9:20 am - 10:00 am Intro to community metrics Scott
10:00 am - 10:30 am Coffee Break
10:30 am - 11:00 am Automating community metrics workflows - data and workflow repositories Matt
11:00 am - 12:00 pm Hands-on Kepler exercise 'making workflows portable' Matt
12:00 pm - 1:00 pm Lunch on your own
1:00 pm - 2:00 pm Round-the-room brainstorm community metrics Scott
2:00 pm - 2:30 pm Prioritize community metrics Scott
2:30 pm - 3:00 pm form working groups plenary
3:00 pm - 3:30 pm Afternoon Break
3:30 pm - 5:30 pm Community metrics implementation hackathons (R) working groups
Thursday February 6, 2014
8:30 am - 10:00 am Community metrics implementation hackathons (R) working groups
10:00 am - 10:30 am Coffee Break
10:30 am - 12:00 pm Community metrics implementation hackathons (Kepler) working groups
12:00 pm - 1:00 pm Lunch on your own
1:00 pm - 2:00 pm Discussion hackathon outcomes plenary
2:00 pm - 3:00 pm Executing and sharing community metrics workflows working groups
3:00 pm - 3:30 pm Afternoon Break
3:30 pm - 4:30 pm Desiderata for sharing community metrics working groups
4:30 pm - 5:30 pm Next steps - requirements for sharing workflows plenary
Friday February 7, 2014
8:30 am - 10:00 am Next steps - prioritized list of datasets, analyses, data operations, visualizations plenary
10:00 am - 10:30 am Coffee Break
10:30 am - 12:00 pm Next steps - research questions to be answered with diverse data and identified community metrics plenary
12:00 pm Adjourn

Outcome

  • Repository design requirements for sharing workflows
  • list of community metrics
  • list of data sets
  • list of data transformation operations to get from raw data to analyses
  • list of visualizations
  • research collaborations: Ideas for ecological questions that can be answered with these data and metrics

Meeting Notes