A B C D E F G I M N O P R S T U V W X

A

addChildNode(BasicNode) - Method in class edu.ucsb.nceas.metacat.BasicNode

Add a child node to this node

B

BasicNode - class edu.ucsb.nceas.metacat.BasicNode.

A Class that represents an XML node and its contents

BasicNode() - Constructor for class edu.ucsb.nceas.metacat.BasicNode

Construct a Basic Node

BasicNode(long, String, long, int) - Constructor for class edu.ucsb.nceas.metacat.BasicNode

Construct a Basic Node

BasicNode(String) - Constructor for class edu.ucsb.nceas.metacat.BasicNode

Construct a Basic Node

BasicNode(String, long, int) - Constructor for class edu.ucsb.nceas.metacat.BasicNode

Construct a Basic Node

C

characters(char[], int, int) - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that is called for each XML text node

comment(String) - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler called once for each comment found: node that comment may occur before or after the root element.

D

DBDTDHandler - class edu.ucsb.nceas.metacat.DBDTDHandler.

A database aware Class implementing DTDHandler interface for the SAX parser to call when processing the XML stream and intercepting notations and unparsed entities

DBDTDHandler(Connection) - Constructor for class edu.ucsb.nceas.metacat.DBDTDHandler

Construct an instance of the DBDTDHandler clas

DBEntityResolver - class edu.ucsb.nceas.metacat.DBEntityResolver.

A database aware Class implementing EntityResolver interface for the SAX parser to call when processing the XML stream and intercepting any external entities (including the external DTD subset and external parameter entities, if any) before including them.

DBEntityResolver(Connection) - Constructor for class edu.ucsb.nceas.metacat.DBEntityResolver

Construct an instance of the DBEntityResolver clas

dbg(int) - Method in class edu.ucsb.nceas.metacat.DBTransform

DBReader - class edu.ucsb.nceas.metacat.DBReader.

A Class that creates an XML text document from a query to a relational DB containing a DOM representation

DBReader.DoctypeInfo - class edu.ucsb.nceas.metacat.DBReader.DoctypeInfo.

A utility class that encapsulates document type information

DBReader.DoctypeInfo(DBReader, String, String, String) - Constructor for class edu.ucsb.nceas.metacat.DBReader.DoctypeInfo

Constructor

DBReader(Connection) - Constructor for class edu.ucsb.nceas.metacat.DBReader

construct a DBReader instance.

DBSAXDocument - class edu.ucsb.nceas.metacat.DBSAXDocument.

A Class that writes an XML document main data to a database connection

DBSAXDocument(Connection, long, String, String) - Constructor for class edu.ucsb.nceas.metacat.DBSAXDocument

Construct a new document instance

DBSAXHandler - class edu.ucsb.nceas.metacat.DBSAXHandler.

A database aware Class implementing callback bethods for the SAX parser to call when processing the XML stream and generating events

DBSAXHandler(Connection) - Constructor for class edu.ucsb.nceas.metacat.DBSAXHandler

Construct an instance of the handler class

DBSAXNode - class edu.ucsb.nceas.metacat.DBSAXNode.

A Class that represents an XML node and its contents and can write its own representation to a database connection

DBSAXNode(Connection, String) - Constructor for class edu.ucsb.nceas.metacat.DBSAXNode

Construct a new node instance for DOCUMENT nodes

DBSAXNode(Connection, String, DBSAXNode) - Constructor for class edu.ucsb.nceas.metacat.DBSAXNode

Construct a new node instance for ELEMENT nodes

DBSAXWriter - class edu.ucsb.nceas.metacat.DBSAXWriter.

A Class that reads in an XML text document and write its contents to a database connection using SAX

DBSAXWriter(Reader, Connection) - Constructor for class edu.ucsb.nceas.metacat.DBSAXWriter

construct a new instance of the class to write an XML file to the database

DBSAXWriter(String, Connection) - Constructor for class edu.ucsb.nceas.metacat.DBSAXWriter

DBSimpleQuery - class edu.ucsb.nceas.metacat.DBSimpleQuery.

A Class that searches a relational DB for elements and attributes that have free text matches to the query string.

DBSimpleQuery(Connection) - Constructor for class edu.ucsb.nceas.metacat.DBSimpleQuery

construct an instance of the DBSimpleQuery class

DBTransform - class edu.ucsb.nceas.metacat.DBTransform.

A Class that transforms XML documents utitlizing XSL style sheets

DBTransform(Connection) - Constructor for class edu.ucsb.nceas.metacat.DBTransform

construct a DBTransform instance.

doGet(HttpServletRequest, HttpServletResponse) - Method in class edu.ucsb.nceas.metacat.MetaCatServlet

Handle "GET" method requests from HTTP clients

doPost(HttpServletRequest, HttpServletResponse) - Method in class edu.ucsb.nceas.metacat.MetaCatServlet

Handle "POST" method requests from HTTP clients

E

edu.ucsb.nceas.metacat - package edu.ucsb.nceas.metacat

ElementNode - class edu.ucsb.nceas.metacat.ElementNode.

A Class that represents an XML element and its contents, and can build itself from a database connection

ElementNode(Connection) - Constructor for class edu.ucsb.nceas.metacat.ElementNode

Construct a new ElementNode instance

ElementNode(Connection, long) - Constructor for class edu.ucsb.nceas.metacat.ElementNode

Construct a new ElementNode instance

ElementNode(Connection, long, long, String, String) - Constructor for class edu.ucsb.nceas.metacat.ElementNode

Construct a new ElementNode instance

endDoctype() - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that receives notification of end of DTD All events in DTDHandler about all unparsed entities and the event in EntityResolver for the DTD file declaration appear between setDoctype and endDoctype.

endDocument() - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that receives notification of end of the document

endElement(NSName) - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that is called at the end of each XML element

F

fileToURL(File) - Static method in class edu.ucsb.nceas.metacat.DBSAXWriter

Utility method to convert a file handle into a URL

findDocuments(String) - Method in class edu.ucsb.nceas.metacat.DBSimpleQuery

routine to search the elements and attributes looking to match query

G

GenericXMLValidate - class edu.ucsb.nceas.metacat.GenericXMLValidate.

Name: GenericXMLValidate.java Purpose: A Class that validates XML documents This class is designed to be 'parser independent i.e.

GenericXMLValidate(Parser) - Constructor for class edu.ucsb.nceas.metacat.GenericXMLValidate

GenericXMLValidate(Parser, String) - Constructor for class edu.ucsb.nceas.metacat.GenericXMLValidate

getAttribute(String) - Method in class edu.ucsb.nceas.metacat.BasicNode

Get an attribute value by name

getAttributes() - Method in class edu.ucsb.nceas.metacat.BasicNode

Get the attributes as a string

getChildren() - Method in class edu.ucsb.nceas.metacat.BasicNode

Get the an enumeration of the children of this node

getDocname() - Method in class edu.ucsb.nceas.metacat.DBReader.DoctypeInfo

get the document name

getDoctype() - Method in class edu.ucsb.nceas.metacat.DBReader.DoctypeInfo

get the document type

getDoctypeInfo(long) - Method in class edu.ucsb.nceas.metacat.DBReader

Look up the document type information from the database

getNodeData() - Method in class edu.ucsb.nceas.metacat.TextNode

Get the node data as a string value

getNodeID() - Method in class edu.ucsb.nceas.metacat.BasicNode

Get the id of this node

getNodeIndex() - Method in class edu.ucsb.nceas.metacat.BasicNode

Get nodeIndex of the node

getNodeType() - Method in class edu.ucsb.nceas.metacat.BasicNode

Get the type of this node

getParentID() - Method in class edu.ucsb.nceas.metacat.BasicNode

Get the parent id of this node

getRootNode(long) - Method in class edu.ucsb.nceas.metacat.DBReader

Get the root node id for an XML document given a document id

getSystemID() - Method in class edu.ucsb.nceas.metacat.DBReader.DoctypeInfo

get the system identifier

getSystemId(String, String, String) - Method in class edu.ucsb.nceas.metacat.DBTransform

Lookup a stylesheet reference from the db catalog

getTagName() - Method in class edu.ucsb.nceas.metacat.BasicNode

Get the name of this node

I

ignorableWhitespace(char[], int, int) - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that is called for each XML text node that is Ignorable white space

incChildNum() - Method in class edu.ucsb.nceas.metacat.BasicNode

increase childNum when new child for the node is created

init(ServletConfig) - Method in class edu.ucsb.nceas.metacat.MetaCatServlet

Initialize the servlet by creating appropriate database connections

M

main(String[]) - Static method in class edu.ucsb.nceas.metacat.DBTransform

the main routine used to test the transform utility.

main(String[]) - Static method in class edu.ucsb.nceas.metacat.DBReader

main routine used for testing.

main(String[]) - Static method in class edu.ucsb.nceas.metacat.DBSAXWriter

the main routine used to test the DBSAXWriter utility.

main(String[]) - Static method in class edu.ucsb.nceas.metacat.XMLValidate

main(String[]) - Static method in class edu.ucsb.nceas.metacat.DBSimpleQuery

the main routine used to test the DBSimpleQuery utility.

MetaCatServlet - class edu.ucsb.nceas.metacat.MetaCatServlet.

A metadata catalog server implemented as a Java Servlet

MetaCatServlet() - Constructor for class edu.ucsb.nceas.metacat.MetaCatServlet

MetaCatUtil - class edu.ucsb.nceas.metacat.MetaCatUtil.

A suite of utility classes for the metadata catalog server

MetaCatUtil() - Constructor for class edu.ucsb.nceas.metacat.MetaCatUtil

N

notationDecl(String, String, String) - Method in class edu.ucsb.nceas.metacat.DBDTDHandler

Notation declarations are not signaled

O

openDBConnection(String, String, String, String) - Static method in class edu.ucsb.nceas.metacat.MetaCatUtil

Utility method to establish a JDBC database connection

P

processingInstruction(String, String) - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler called once for each processing instruction found: node that PI may occur before or after the root element.

R

readXMLDocument(long) - Method in class edu.ucsb.nceas.metacat.DBReader

Create an XML document from the database starting with the element having element_id nodeid

resolveEntity(String, String) - Method in class edu.ucsb.nceas.metacat.DBEntityResolver

The Parser call this method before opening any external entity except the top-level document entity (including the external DTD subset, external entities referenced within the DTD, and external entities referenced within the document element)

returnErrors() - Method in class edu.ucsb.nceas.metacat.GenericXMLValidate

S

setAttribute(String, String) - Method in class edu.ucsb.nceas.metacat.BasicNode

Add a new attribute to this node, or set its value

setAttribute(String, String) - Method in class edu.ucsb.nceas.metacat.DBSAXNode

Add a new attribute to this node, or set its value

setDoctype(DTD) - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that receives notification of DTD.

setNodeData(String) - Method in class edu.ucsb.nceas.metacat.TextNode

Set the node data to the given string

setNodeID(long) - Method in class edu.ucsb.nceas.metacat.BasicNode

Set the id of this node

setNodeIndex(int) - Method in class edu.ucsb.nceas.metacat.BasicNode

Set the node index of this node

setNodeType(String) - Method in class edu.ucsb.nceas.metacat.BasicNode

Set the type of this node

setParentID(long) - Method in class edu.ucsb.nceas.metacat.BasicNode

Set the parent id of this node

setTagName(String) - Method in class edu.ucsb.nceas.metacat.BasicNode

Set the name of this node

startDocument() - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that receives notification of beginning of the document

startElement(NSName, SAXAttrList) - Method in class edu.ucsb.nceas.metacat.DBSAXHandler

SAX Handler that is called at the start of each XML element

T

TextNode - class edu.ucsb.nceas.metacat.TextNode.

A Class that represents an XML element and its contents, and can build itself from a database connection

TextNode(Connection, long, long, String, String) - Constructor for class edu.ucsb.nceas.metacat.TextNode

Construct a new TextNode instance

toString() - Method in class edu.ucsb.nceas.metacat.TextNode

String representation of this text node

toString() - Method in class edu.ucsb.nceas.metacat.ElementNode

String representation for display purposes (recursively descends through children to create an XML subtree)

transformXMLDocument(String, String, String, PrintWriter) - Method in class edu.ucsb.nceas.metacat.DBTransform

Transform an XML document using the stylesheet reference from the db

U

unparsedEntityDecl(String, String, String, String) - Method in class edu.ucsb.nceas.metacat.DBDTDHandler

All are reported after startDocument and before first startElement event

V

validate(String) - Method in class edu.ucsb.nceas.metacat.GenericXMLValidate

validateString(String) - Method in class edu.ucsb.nceas.metacat.GenericXMLValidate

validating - Variable in class edu.ucsb.nceas.metacat.XMLValidate

W

writeChildNodeToDB(String, String, String) - Method in class edu.ucsb.nceas.metacat.DBSAXNode

creates SQL code and inserts new node into DB connection

writeNodename(String) - Method in class edu.ucsb.nceas.metacat.DBSAXNode

creates SQL code to put nodename for the document node into DB connection

X

XMLValidate - class edu.ucsb.nceas.metacat.XMLValidate.

XMLValidate.java Purpose: A Class that validates XML documents This class is uses a specific parser and calls the GenericXMLValidate class to do the actual validation Copyright: 2000 Regents of the University of California and the National Center for Ecological Analysis and Synthesis April 28, 2000

XMLValidate(String) - Constructor for class edu.ucsb.nceas.metacat.XMLValidate

A B C D E F G I M N O P R S T U V W X