Metacat

    	// Get the xml as a string so we can write to file later

    	String xmlString = StringUtil.readerToString(xml);

                + conn.getUsageCount());

        AccessionNumber ac = new AccessionNumber(accnum, action);

        String docid = ac.getDocid();

        String rev = ac.getRev();

                + serverCode + " override: " + override);

        if ((serverCode != 1 && action.equals("UPDATE")) && !override) {

            // the resident server will not give a lock then we send the user

            // a  message saying that he/she needs to download a new copy of

            // the file and merge the differences manually.

            // check for 'write' permission for 'user' to update this document

            if (!hasWritePermission(user, groups, accnum)) {

                // Force replication the docid

                ForceReplicationHandler frh = new ForceReplicationHandler(

                        accnum, true, null);

                return (accnum);

            }

                // the file is currently locked by another user notify our

                // user to wait a few minutes, check out a new copy and try

                // again.

                        + server + " reason: file already locked");

                throw new Exception(

                        "The file specified is already locked by another "

                // our file is outdated. notify our user to check out a new

                // copy of the file and merge his version with the new version.

                //System.out.println("outdated file");

                        + server + " reason: local file outdated");

                throw new Exception(

                        "The file you are trying to update is an outdated"

                    //false means it is not a revision doc

            conn.setAutoCommit(false);

            parser.parse(new InputSource(xml));

            conn.commit();

            conn.setAutoCommit(true);

            addDocidToIndexingQueue(docid, rev);

        } catch (Exception e) {

            e.printStackTrace();

            conn.rollback();

            conn.setAutoCommit(true);

              pstmt.close();

              conn.increaseUsageCount(1);

          } catch (Exception e){

                                       + "xml_queryresult where docid is "

                                       + docid + " in DBQuery.write: "

                                       + e.getMessage());

        // metacat notify the force replication.

        ForceReplicationHandler frh = new ForceReplicationHandler(accnum,

                action, true, null);

        // clear cache after inserting or updating a document

        if (PropertyService.getProperty("database.queryCacheOn").equals("true"))

        {

     	   DBQuery.clearQueryResultCache();

        }

                + conn.getUsageCount());

        return (accnum);

    }