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Revision 5539

Added by ben leinfelder over 14 years ago

list the currently registered ontologies (in case someone wants to unregister them?)

View differences:

ontologies.jsp
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<%@ page language="java"%>
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<%@page import="org.ecoinformatics.sms.ontology.bioportal.OntologyService,org.ecoinformatics.sms.ontology.bioportal.OntologyBean,java.util.List"%>
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<%@page import="org.ecoinformatics.sms.SMS,org.ecoinformatics.sms.ontology.Ontology"%>
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<%
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/**
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 *
......
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		dropDown.append("</option>");
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	}
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%>


  		




  
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<%


  		




  
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	//show the currently registered ontologies in metacat's plugin


  		




  
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	StringBuffer registeredDropDown = new StringBuffer();


  		




  
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	List<String> ontologies = SMS.getInstance().getOntologyManager().getOntologyIds();


  		




  
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	for (String uri: ontologies) {


  		




  
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		Ontology ontology = SMS.getInstance().getOntologyManager().getOntology(uri);


  		




  
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		String label = SMS.getInstance().getOntologyManager().getOntologyLabel(ontology);


  		




  
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		registeredDropDown.append("<option value='");


  		




  
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		registeredDropDown.append(uri);


  		




  
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		registeredDropDown.append("'>");


  		




  
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		registeredDropDown.append(label);


  		




  
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		registeredDropDown.append("</option>");


  		




  
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	}


  		




  
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%>


  		




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<html>


  		




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<head>


  		




  ......




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<h2>Ontology Management (Metacat)</h2>


  		




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<p>Ontologies should be registered in Metacat before they can be used in Annotation-based searches.</p>


  		




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<h3>Currently Registered Ontologies</h3>


  		




  
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<form method="POST" action="<%=SERVLET_URL%>" target="_top" id="existingRegistrationForm" name="existingRegistrationForm" ">


  		




  
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	<input name="qformat" value="semtools" type="hidden" />


  		




  
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	<table>


  		




  
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		<tr>


  		




  
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			<td>Action:</td>


  		




  
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			<td>


  		




  
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				<select name="action" id="action" disabled="disabled">


  		




  
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					<option value="registerOntology">Register Ontology</option>


  		




  
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					<option value="unregisterOntology" selected="selected">Unregister Ontology</option>


  		




  
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				</select>


  		




  
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			</td>


  		




  
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		</tr>


  		




  
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		<tr>


  		




  
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			<td>Ontology:</td>


  		




  
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			<td>


  		




  
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				<select name='id' id='id'>


  		




  
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					<%=registeredDropDown.toString()%>


  		




  
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				</select>


  		




  
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			</td>


  		




  
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		</tr>


  		




  
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		<tr>


  		




  
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			<td colspan="2"><input type="submit" value="Submit"/></td>


  		




  
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		</tr>


  		




  
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	</table>


  		




  
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</form>


  		




  
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<h3>Available BioPortal Ontologies</h3>


  		




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<form method="POST" action="<%=SERVLET_URL%>" target="_top" id="bioportalRegistrationForm" name="bioportalRegistrationForm" ">


  		




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	<input name="qformat" value="semtools" type="hidden" />


  		












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