ENM/GARP_SingleSpecies_BestRuleSet-IV.xml crashes Ubuntu Kepler.
On mac execution completes but gives ImageJ "Unrecognized comand: ASC TextReader" messages.
#3 Updated by Dan Higgins over 11 years ago
The Mac error 'ImageJ "Unrecognized comand: ASC
TextReader" also occurs on the GARP Model ImageJ workflow. It looks like this is another problem due to rearranging the files on the Mac. ImageJ looks for plugins in the working directory. If the 'plugins" dir is moved out of the 'Kepler.app' dir on the Mac and into the containing 'Kepler' dir the error does not occur because ImageJ can then find the ASC reader plugin code
#5 Updated by Chad Berkley over 11 years ago
I was finally able to reproduce the crash on ubuntu by installing a fresh version of ubuntu in a VM and running kepler from there. It appears they changed the libexpat and libscew versions in the new release which is causing problems with garp. I recompiled scew and expat and it seems to be working. I don't think we can distribute expat or scew though, so I think we're just going to have to put a note in the workflow or in a readme to let people know that they might have problems on linux.
#7 Updated by Aaron Aaron over 11 years ago
GARP_SingleSpecies_BestRuleSet-IV.xml runs on windows v3 installer and Mac os X v3 installer.
garpModel_ImageJ.xml runs on win & mac v3 installers.
garpModel_ImageJ_withData.xml - the data source was taking so long to load (on win and mac) I did not finish testing...