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Bug #6102: actor classes not saved properly in KAR files Bug #6175: GenericJobSubmission actor sometimes runs job without completing data transfer. Bug #5120: Provide a toggle for automatic updates Bug #6167: Model Context Menu should have the enableBackwardTypeInference choice Bug #3172: windows mouse wheel doesn't scroll canvas Bug #3931: Get the R actor working with JNI Bug #3973: Additional information for 64-bit users installing 1.0.0 Bug #4010: RExpression2 - tracking for backwards compatibility Bug #4012: update documentation to explain adding actor to library via KAR Bug #4040: make a new module called globus to host globus actors and needed packages. Bug #4048: Get error message when too much code in single R actor Bug #4049: Import actor that already exists appends strange numbering scheme Bug #4056: create developer documentation for svn configuration. Bug #4057: UserInteractiveShell message Bug #4087: No reset/x button to clear component searches Bug #4095: Java Package Ontology (e.g. to facilitate Ptolemy component access) Bug #4097: here are some new svg icons for actors Bug #4104: Need resource manager to handle objects in the resources directories Bug #4112: make kepler use OSX dialog boxes Bug #4113: Kepler changes property position in XML but keeps values Bug #4132: Workflow Run Manager - Open in New Window is just opening the workflow, not the ROML or report Bug #4139: port names are displayed twice Bug #4153: report-overrides Bug #4162: using the alt key makes menus appear in strange places on OSX Bug #4168: User documentation creates bloat in workflows Bug #4203: use port parameters in web service actors Bug #4216: Problems with the File to Array converter Bug #4219: "Kepler Repositories" should be retrieved from the registry Bug #4246: Reorganize code in util, core and gui modules Bug #4260: Add a test suite for the build system Bug #4268: RExpression output ports search entire search path for objects to export Bug #4273: Ctrl+E operates on mouse position, not selection Bug #4281: ant update produces message about running svn cleanup Bug #4285: workflow canvas does not repack to fill empty space when top window is resized Bug #4287: Separate user error messages from developer error messages. Bug #4288: Develop GUI error handling strategy. Bug #4289: Develop strategy for using assertions in the GUI Bug #4290: Separate the GUI from the execution engine. Bug #4291: The main menu bar should not change based on the location of focus. Bug #4292: Menu items should display the same icon as buttons with the same functionality. Bug #4293: Run, Pause, and Stop should be in the menu, not just the toolbar. Bug #4294: Kepler should meet established accessibility guidelines. Bug #4295: Create advanced toolbar support. Bug #4296: All open Kepler windows should be visible from a Window menu item. Bug #4298: The GUI should sensibly support internalization. Bug #4299: Kepler needs to be evaluated to determine when native (AWT) widgets would be preferable to Swing widgets. Bug #4300: Animate at Runtime" checkbox stays checked when director is replaced Bug #4310: ValueListeners receive valueChanged events when values have not changed Bug #4323: Add the "send to back" menu to kepler Bug #4328: change-to command checks out across branches Bug #4339: build system needs to provide more information on modules Bug #4341: rearrange the actors module into smaller modules Bug #4354: Enable the build system to work on multiple SCM systems. Bug #4358: variable setter seems to lock Kepler in the wrapping up stage of a workflow Bug #4360: Kepler gets slow under XP Bug #4371: pipe highlighting under "Animate at Runtime" Bug #4404: DataTurbine actor - instantiating actor without internet gives error msg Bug #4407: RExpression problems with named non-numeric vectors Bug #4429: EML 2 Dataset requires File Extension Filter parameter Bug #4431: Export Archive actions should share code where possible Bug #4434: Workflow Run Manager - add ability to hide/show columns Bug #4458: test for moving kepler directory Bug #4478: Configuring ports Bug #4519: SDF Director cannot schedule when composite actor input port is disconnected Bug #4532: have to manually click Build to rename repositories Bug #4549: String Replace actor "remembers" previous execution values Bug #4561: icon overlays not showing up for actors in the components tree Bug #4564: Model Reference throws error with workflows in the same folder, but still functions Bug #4577: integrate, and separate from save/export, the code for Uploading Bug #4584: CacheManager.getObject(KeplerLSID lsid) returns an object with the wrong LSID Bug #4589: Workflow Run Manager - tagging causes row(s) to unhighlight Bug #4591: ImageJ creating folders based on file paths from prior executions saved in the MOML Bug #4604: Make aesthetic changes to tagging interface Bug #4613: EML 2 Dataset automatically updating to latest package doesn't trigger "workflow change" Bug #4639: add support for -Drev to ant change-to Bug #4642: memory usage & slowdowns Bug #4667: New documentation on modules and extension points for modules Bug #4674: WorkflowRunManager search cells are catching tab keys wherever they occur Bug #4699: Reminder Bug Update FAQ to reflect Kepler 2.0 release Bug #4700: Reminder Update Wiki information to reflect Kepler 2.0 release. Bug #4706: support provenance in master-slave 2.0 Bug #4735: Allow params to be passed to ConfigurationManager from the command line Bug #4736: RFE speed up Suggest Similar Components feature Bug #4740: Create Ontology_Catalog sql table in the CORE persistent database Bug #4749: run google earth within kepler gui Bug #4783: Standardize workflow parsing to get parameters Bug #4785: move cache object from 1.0 to 2.0 Bug #4801: out of memory Bug #4811: No "Get Metadata" item on right-click menu after dragging an EML actor to the canvas Bug #4829: User log4j files Bug #4859: GDALTranslate does not work on Windows 7 (64bit) Bug #4869: changes made to workflows during dialogs before committing (Edit Parameters/Cancel) Bug #4876: RExpression - recursively handle arrays Bug #4883: Need more command line options for kar files Bug #4908: actor/director/attribute .xml file documentation needs to be updated Bug #4919: tag removal sends two tagRemoved events through provenance Bug #4920: dynamically change toolbar buttons Bug #4953: Remote Components category sticks around sometimes Bug #4978: Create additional 'module' property for any menu entries that are inserted by non-core modules Bug #5018: Items with the same LSID show with the same name in the Components Library Bug #5030: RExpression2 actor will fail if the libs are not found Bug #5045: Add a menu to add and configure new remote kepler servers Bug #5048: Can't clean (or do other build system operations) offline Bug #5067: The introduction of basic services so that module names are not referenced. Bug #5068: Investigate jars (why they are necessary) and upgrade whenever possible. Bug #5069: The ability to create user manuals from a wiki that is continuously updated. Bug #5075: Fix the module manager so it can show docs with any name. Bug #5076: Minimize the number of files downloaded from the Ptolemy repository. Bug #5081: A system for adding and removing GUI menus. Bug #5129: adding and removing configuration properties could be made easier Bug #5153: Save As... closes all windows associated with a workflow Bug #5155: To exclude a file or directory requires updating at least four places, only one should be necessary Bug #5170: uploading a workflow requires a refresh Bug #5173: Develop clear criteria for when code in Kepler CORE should be in its own module. Bug #5249: test kepler for memory leaks Bug #5276: component search performance is poor Bug #5281: cannot open 1.0 KARs Bug #5290: originModule not always set Bug #5333: 2.2 rc3: getenv("") doesn't work for mac installation. Feature #5343: Add optional Console view Bug #5354: Integrate Kepler Wiki Into Kepler Help Bug #5444: Kepler can't run workflow if two instances exist at same time Bug #5510: On Ubuntu, Kepler can disappear from the dock while still running Bug #5577: EML 2 Dataset actor EML File and Data File parameters should accept URLs Bug #5581: Make UI improvements to Components Download Bug #5586: Get newest version of local files in EML actor Bug #5590: RExpression forces pdf if 'automatically show graphics' is checked Feature #5626: interacting with kepler.sh to know the status and other information in batch-mode. Bug #5627: List all possible port types in actor Types drop down list Bug #5645: kar uploading should need user account. Bug #5646: Switching some of the add-on modules to core Bug #5652: Geon Scp and spa Ssh2Exec have duplicate code. Bug #5664: Check for duplicate code Feature #5666: Build system needs a target to build all common or blessed non-core modules Bug #5682: ontology classes require unique label Bug #5687: investigate alternatives to workflow versioning Bug #5689: remove configs/.../configuration.xml override Bug #5691: parameter choices are not saved Bug #5699: Change the workflow scheduler server documentation link in the workflow-scheduler-gui module Bug #5715: Actor Reference documentation Bug #5760: saving xml to existing file asks twice on mac Bug #1143: need SAS actor Bug #1548: consolidating data access user interfaces Bug #1587: Define and implement EcoGrid "dataQuery" method Bug #1655: DIALOGS: Implement New UI for Sources Dialog (was "integrate ecogrid registry into kepler ecogrid client") Bug #1749: Global toggle for port name display Bug #1884: Enable drag and drop of ports and relations Bug #1890: Add query builder to generic db actor Bug #1911: Provide real-time feedback/animation for workflow progress as a default Bug #1914: Implement the 'most recently used' concept for workflows and actors Bug #1915: Define a published interface for a semantic search service Bug #1916: Implement semantic search for data and actors in local files Bug #1917: Design and implement workflow semantic type check. Bug #1918: Search based on the semantic annotation of an actor's port Bug #1919: choose language for semantic annotations in kepler archives Bug #1920: Search based on semantic annotations of a dataset's attributes Bug #1921: Define the Kepler GUI components required for semantic mediation in Kepler Bug #1922: Develop strategies for GUI extenstions for the semantics stuff Bug #1923: Develop ontologies; engage KR group Bug #1981: Extend database query actor to handle datatypes Bug #1997: Support Getting Metadata for Darwin Core search result item Bug #2005: associate an visual text annotation with a specific actor Bug #2011: MENUS: Context Menus - Add Cut/Copy/Paste to all right click popup menus Bug #2012: Incorporate combo boxes with pick lists in as many places as possible to minimize user typing and provide knowledge of acceptable choices Bug #2015: Provide more meaningful error messages Bug #2024: provide natural language summary of workflow Bug #2027: provide ability to assign checkpoints in the workflow Bug #2028: provide ability to easily visualize data at various places in workflow Bug #2029: consider guided analysis wizard Bug #2033: provide indication of actor compatibility Bug #2036: provide different levels of turning displaying annotations Bug #2056: Port labels appear 'twice' when DataSource actor added Bug #2104: add concept search for data Bug #2105: add taxon concept search for data Bug #2106: allow user to save search results Bug #2109: make double-click open composite actor Bug #2113: provide mechanism for saving queries Bug #2116: alert user when new ontology is available Bug #2117: mechanism for user to query for semantically compatible actors Bug #2118: allow users to create units based on units in current ontology Bug #2119: create user guide to ontologies for ecologists Bug #2120: add visual indicators for non-annotated ports Bug #2121: add features to support structural incompatibility Bug #2122: add features to support semantic incompatiblity Bug #2129: Data sources' schema attribute should not be stored in MoML Bug #2133: Need ability to update data searches Bug #2140: need dataset extraction WF for documentation/example purposes Bug #2225: EML parser does not handle attribute list reference Bug #2230: EML actor doesn't handle footer line in data file Bug #2241: {de-}serialize semantic annotations to and from EML Bug #2245: TRACKING: Batik SVG Rendering - remaining tasks Bug #2246: TOOLBAR: status on opening workflows and blank frames Bug #2247: TRACKING: Popup Dialog Changes Bug #2249: Need to support a useful subset of PHYLIP (PHYlogeny Inference Package) Bug #2250: Need documentation for collection-oriented workflow approach Bug #2251: Need to document how to use Kepler for phylogenetics Bug #2257: DIALOGS: Implement New Workflow Dialog Bug #2258: DIALOGS: Implement New Director Dialog Bug #2259: DIALOGS: Implement New Actor Dialog Bug #2260: DIALOGS: Implement New "Advanced Search for Components" Dialog Bug #2261: DIALOGS: Implement New "Advanced Search for Data" Dialog Bug #2262: DIALOGS: Implement New "Search Ecogrid for Component Sources" Dialog Bug #2263: DIALOGS: Implement New "Search Ecogrid for Data Sources" Dialog Bug #2264: DIALOGS: Implement New "Semantic Annotation" Dialog Bug #2265: Simple Kepler features movie to be displayed at the 1st time installation Bug #2270: TRACKING: Localization and Improvement of User-Visible Messaging Strings Bug #2271: Changing the Color Scheme Bug #2302: Problem unzipping hierarchical data Bug #2307: Mac OSX code missing for several JNI actors Bug #2324: SVG - old-style icon still displayed for certain actors Bug #2337: TRACKING - MENUS: Top-Level Menu Revision Bug #2338: TRACKING - MENUS: pop-up context menu revision Bug #2342: MENUS: Top-Level Menu - some toolbar buttons showing text Bug #2348: Rewrite disk based GIS code for speed increase Bug #2349: Actors should have preconditions to test for long runs Bug #2359: enable/disable menu items and toolbar items as appropriate Bug #2362: DataSourceIcon: use new SVG Icons dynamically, instead of drawing icon Bug #2367: MENUS: Context Menus - Additional context menu designs needed Bug #2382: Documentation kar does not appear in actor tree Bug #2388: Incorporating the SRB actors with the gsi authentication framework Bug #2393: Need ability to disable 'add port' to actors where not supported Bug #2397: TOOLTIPS: dual screen setup - tooltip sometimes shown on wrong screen Bug #2400: Need ability to set parameter ranges and relationships. Bug #2410: need feature in UI for users to assign icon to an actor Bug #2414: Opening a preexisting model should open in a blank viewer Bug #2416: ICONS: Tracking bug - Rearranging and regenerating icons Bug #2445: DataSource: add code to assign & display new raster thumbnail Icons for search results list Bug #2446: ICONS: Handle missing thumbnails elegantly Bug #2449: Animate at Runtime... action only partially works Bug #2450: consider better mechanism for navigating multi-level workflow Bug #2451: consider providing data-centric/data management feature in Kepler Bug #2452: consider providing management console for workflow engineer Bug #2459: Need for actor/attribute that detects OS/executables Bug #2494: Problem with Microsoft zip extractor and Kepler zip Bug #2509: FSM & Modal Model Menu selections do not work Bug #2562: add unit info to eml2Data source actor Bug #2570: port's context menu should contain renaming Bug #2672: actor search term should be trimmed + searching with multiple terms Bug #2828: Actor names inconsistent Bug #2895: Distributed Execution Tracking Bug Bug #2921: Way to temporarily comment out actors or connections Bug #2963: Add data structure for tabular data and associated metadata Bug #2987: Kepler Library (actor repository) Issues Bug #2989: Changes in actor ontology does not cause the actor library to rebuild Bug #2990: file|open dialog should open in workflows directory Bug #2997: Icons stop working after using kepler for a while Bug #3028: Need for new IPCC/Hydro1K data (and metadata) on EarthGrid Bug #3038: Save in Library Dialog problem with default Category Bug #3062: Need ASC grid Utilities actor Bug #3066: actor sdk Bug #3095: add data mining actors (weka) and cheminformatics actors Bug #3106: Out of memory while opening all demos, is -Xss5m or SVG the problem? Bug #3116: Web page rendering needs to be made w3c compliant Bug #3143: dataFrame_R cache problem under parallels Bug #3149: cannot add arbitrary jars when exporting archive Bug #3152: Use EcoGridServicesController with EcoGridWriter actor Bug #3158: RBNBToKepler actors need to timeout more quickly Bug #3160: RBNBToKepler actors should work within SDF, PN and DDF Bug #3161: progress meter when downloading data with RBNBToKepler actors Bug #3183: Return/Enter does not select default button in dialog boxes Bug #3187: RExpression actor does not share focus Bug #3189: CommandLineExec needs ability to kill spawned process Bug #3192: behavior of documentation actor Bug #3194: add actors to support Sun Grid Bug #3204: Kepler should have FSM examples Bug #3205: gdalTranslate actor crashes on bad format and won't work with all gdal formats Bug #3208: consolidate matlab actors Bug #3210: add netCDF support to Kepler Bug #3220: "Save" from TextEditor interferes with workflow save-before-closing prompt Bug #3221: offset new windows Bug #3222: save new workflow template Bug #3223: interactive graphics in R Bug #3226: Eval: subplots from RExpression overly condensed Bug #3228: Kepler need a central place to handle network disconnection Bug #3230: Matrix Viewer actor does not accept RExpression matrices Bug #3231: 3-way table output (multiway cross tabulation actor?) Bug #3235: Add an Edit, Select All menu item and respective accelerator Bug #3265: ascToRaw needs more error handling Bug #3266: ENM/GARP_MultipleSpecies-V.xml problems Bug #3275: EML200DataSource interface Bug #3278: Search result count is inflated when using both KNB sources ([un]authenticated) Bug #3290: DarwinCore_test workflow takes forever to downloading data Bug #3291: IPCC_ChangeNightlyBuildTest got an exception Bug #3292: ENM/GDAL_h1K_NS workflow giving an exception Bug #3295: Python/Ptolemnizer welcome text does not display Bug #3333: "configure actor" dialog box changes after "documentation->display" Bug #3361: parameters lose their Display Name when copy and pasted Bug #3388: error running simihofi.xml workflow in Kepler 1.0.0 Bug #3392: Need scrollbars in Documentation > Customize Documentation window Bug #3407: reset debugging windows, add timestamps Bug #3408: create icon for DDF Boolean Select Bug #3440: add Up and Down buttons to change port order on an actor Bug #3531: Save As dialog inconsistent between linux and mac Bug #3539: wierd behaviors of port parameter Bug #3546: Automatically load trace for a completed run into the provenance browser Bug #3552: Annotation elements in trace file do not appear in details pane of provenance browser Bug #3555: enhancements to Trace File view in provenance browser Bug #3557: Provide data dependency graph view in provenance browser Bug #3558: Store each workflow run trace in it's own directory Bug #3559: month field in trace file name is off by one Bug #3560: Color-code contents of CollectionDisplay Bug #3566: order collection contents displayed in provenance browser? Bug #3568: support for writing COMAD-style trace files from the Provenance Recorder Bug #3573: Support for importing file contents automatically using CollectionSource Bug #3574: Support for importing directory contents using CollectionSource Bug #3575: A representation of COMAD collections on the file-system Bug #3576: support for accessing cascading metadata from within CompositeCoactor Bug #3577: FilterUI actor has problems Bug #3578: optimize timing of data download by EML and other data source actors Bug #3585: Provide API for creating output files during a workflow run Bug #3595: Exporting an actor should prompt user to semantically annotate it if it's not already Bug #3652: Ensure all Provenance Recording Types record the same things Bug #3655: create a Workflow Run Manager with ability to export Publication Ready Archives Bug #3668: Define contents of "Publication Ready Archive" Bug #3671: Configurable workspace directory for holding workflows, data, and run products Bug #3693: MultiInstanceComposite actor deadlocks sometimes Bug #3694: Sharing installation among users fails, users must have write permission Bug #3705: some actor icons don't denote that they are a composite Bug #3706: Add "Open the container" toolbar button Bug #3724: composite's ports cannot be renamed from within composite--add context menu? Bug #3766: Improve menu options in text editor Bug #3774: Hello World demo causes UI to become unresponsive and require restart Bug #3785: Unclear Java requirements for Kepler installer on Vista 64-bit Bug #3802: actor icons prevent channel connectors to align straight Bug #3803: Cannot open a workflow through the command prompt, open with, or send to menus Bug #3899: web service actor does not work through proxy Bug #3903: Use Java logging utilities instead of Apache commons logging facility Bug #3915: The error dialogue won't go away. Bug #3921: Exported KAR files do not correctly export private classes Bug #3930: error importing hello-world tutorial actor into kepler-1.0 suite Bug #3943: error importing more than one actor created in one suite using kepler-1.0 Bug #3944: External script editors Bug #4002: RExpression2 - handle arbitrary R data structures Bug #4003: Support for non-GUI Kepler installer. Bug #4035: MoMLSimpleApplication does not filter Display actor or any GUI Kepler actors. Bug #4039: matlab actor always stops matlab process in wrapup Bug #4041: synchronization in matlab actor Bug #4046: ComadTest should report more details when detecting an error Bug #4052: Should be able to store native libraries in a kar file Bug #4108: Do more extenstive testing before designating a revision of Ptolemy as stable Bug #4131: Workflow Run Manager - Open in New Window allows opening same wf multiple times Bug #4137: Workflow Run Manager - resizing width of column while in edit mode of search cell does not resize edit field Bug #4138: Workflow Run Manager - search cell edit focus isn't lost appropriately Bug #4254: wrapping up, never ending workflow! (PN inside PN) Bug #4306: add command line params to the configuration Bug #4363: wrm does not properly handle ModelReference actor Bug #4480: can't view more than one of workflow editor, report designer, and report viewer at a time Bug #3633: New token type: By Reference / By Value Bug #4240: Report Designer - Menus with Copy, Cut, and Paste as related to Text Fields / Section Headers Bug #4533: printing from the report viewer prints the workflow editor content Bug #2123: need a way to uniquely identify actor in a workflow and locate it Bug #2962: Add metadata to data tokens so that it can be used downstream Bug #2964: Change RExpression plotting actors to allow custom axis and title labels Bug #2968: Ability to join tables within same EML data package Bug #2969: Ability to join tables _across_ EML data packages Bug #4764: ProvenanceRecorder.changeExecuted slow after workflow run Bug #4795: RExpression & cache cleaning Bug #4806: add output port to Throw Exception Bug #4809: Kepler storing authenticated search results Bug #4810: [right click]->Save Archive (KAR) on composite actor borks port attributes Bug #4812: local repository KAR [right click]->Delete fails when file does not exist Bug #4815: Need a target to build kepler-styles.jar Bug #4827: RExpression does not handle matrix tokens correctly. Bug #4870: searching for packages with the same name from multiple sources sometimes loses results Bug #4879: RExpression replaces ) in string vectors with } when outputting to a port Bug #4880: RExpression cannot output matrix of strings Bug #4881: RExpression outputs [false] for any matrix of booleans Bug #4887: If a module is added to a configuration, the error message should include the fix Bug #4909: Actor documentation: updates ignored, duplicate info, how to refer to other actors/models? Bug #4930: Failing to download a dependent module still indicates success Bug #4934: Certain non-user triggered actor icon changes are not reflected immediately in the zoom widget Bug #4995: ant installer fails under Linux Bug #5012: highlighted OK button in 'Annimate at runtime ...' menu item does not work. Bug #5027: Users should be able to build installers for the Kepler-2.0 branch Bug #5036: All workflows that do not work should be moved. Bug #5064: Kepler 2.1 Tracking Bug Bug #5122: Develop an approval process for patches Bug #5123: Create an ant task to display commits since last patch of a given module Bug #5148: Remove println from XSLTActor Bug #5149: kar file saving problems. Bug #5150: errors to save an actor as kar if its name has forward slash ('/'). Bug #5151: kar files are not openable if they are generated from actors. Bug #5152: Errors when saving more than one actors in a kar. Bug #5162: Kepler quits with JVM error (no use-case for reproducing error) Bug #5163: Items of Interest pane in reporting cannot be used when a sensor site is executing Bug #5177: Enhance displaying workflow in kepler server library skin Bug #5187: GUI should make apparent unsaved changes Bug #5189: When File -> Exit is choosen Kepler closes all workflows without warning Bug #5192: Module Manager reacts badly to dot files in resources/configuration directory Bug #5195: Help | Module Documentation is empty Bug #5258: kepler start exception when soft links are in KeplerData/workflows/MyWorkflows Bug #5267: Changing a ptolemy.kernel.util.Attribute in Kepler gui doesn't work Bug #5268: Dragging modified version of Sinewave actor to canvas causes gui oddity Bug #5269: Selectordialog and Case actors do not work well together Bug #5271: No-gui mode needs a way to access private data source Bug #5285: NPE on restart using newly created suite Bug #5289: Change report instance margins from transparent to white Bug #5298: rendered west and east dynamic item label problems Bug #5299: can't drag using report designer item icons Bug #5304: Report designer - make "+ Get Image..." button much smaller Bug #5305: Report designer - make north and south dynamic item labels left justified Bug #5306: Report designer - make dynamic report item label textfields smaller Bug #5307: Report designer - fix drag and drop outline sizes Bug #5314: Closing last workflow window closes Kepler application Bug #5327: Need to fix documentation system Bug #5329: Workflow Run Manager - launch Provenance Browser from run-row Bug #5336: If a user chooses "no metadata" as output format in Database Query actor, the query result only shows one column no matter the query specifies to select two or more columns Bug #5338: In Database Query actor, the output behavior will be different if there is no result set found when you check or uncheck outputEachRowSeparately Bug #5339: In Database Query actor, the output port will be string type if you choose the output type to be "record" Bug #5340: Miss a dollar sing ($) when an actor references a parameter. Bug #5344: Kepler ships open source software and needs to include license files Bug #5357: invocation problems with Distributed Composite Actor Options dialog Bug #5401: Workflow archiving dataturbine data to metacat should check the last archiving time through repository Bug #5423: Put kepler-server war file and kepler executatlbe as part of normal installation procedure Bug #5435: passing string into a parameter for headless execution doesn't work Bug #5474: Make the eml actor on kepler handle multiple physical representations in an entity Bug #5482: Module manager should run patch checker before restart Bug #5483: Another Kepler GUI will nuke the ~/.kepler/cache generated by the kepler in workflow run engine Bug #5511: If Kepler-2.2 is running, then opening a .kar in Kepler trunk produces exceptions Bug #5538: Eclipse uses different .class files from ant run Bug #5541: Kepler crashes on startup with NoClassDefFoundError Bug #5554: Build system doesn't recompile using dependencies by default Bug #5555: Add reverse index in ArrayElement Bug #5556: Add key bind to GUI to avoid connecting edge prematurely Bug #5557: Replace hardcoded path separator with File.pathSeparator Bug #5558: Add kepler-tasks target to build.xml and use depend in kepler-tasks.xml Bug #5559: Curation Package User Manual PDF Bug #5584: Create a Date To Long actor Bug #5585: Add date format E MMM d HH:mm:ss zzz yyyy to DateToString Bug #5593: use setDefaultWidth in actors Bug #5596: Kepler UI freezes after Login Anonymously Bug #5611: LinearModel actor doesn't handle input variables properly Bug #5612: String index out of range in R actor Bug #5614: Build system should not require svn binary Bug #5628: possible to get NPE when right-clicking on kar in Components tree Bug #5639: ant update ptolemy -Drev=stable doesn't update you to latest "stable" Bug #5667: reevaluate how opening kars vs. XML should work from actor library. Bug #5670: see if runtimemonitor module can be deleted, contains duplicate code Bug #5671: Workflow Run Manager tries to connect to keplerDevRepository as a database instead of kar store Bug #5672: java -jar sensorview-utils-1.0.jar should invoke a simple java app that prints help Bug #5673: if user has newer version of module than exists in repository, old version will be downloaded Bug #5674: The patch downloader dialog can fail to automatically restart Kepler Bug #5690: problems with updateActorDocs Bug #5692: Values not committed to actors Bug #5693: decide on issuing patches so older versions of kepler can upload accessible items to Metacats > 2.0 Bug #5695: more automatic module update process. Bug #5697: Workflow Run Manager can fail to Force Open a run kar that Kepler can Bug #5721: Add ModelRepaintController to the Kepler library Bug #5724: Display actor's suppressBlankLines parameter not working Bug #5834: Fix Kepler Javadoc warnings Bug #4327: Workflow Run Manager - ability to import run archives Bug #4361: Workflow Run Manager column "Workflow Name" can be confusing Bug #4693: Ability to save just a report instance Bug #4746: ability to create a Site Layout report Bug #4897: Arrow key navigation of Workflow Run Manager can stop working Bug #4933: Improve solution to avoid ConcurrentModificationException when tagging more than 1 run Bug #4981: RIO pdfs don't show up in the Component Library Bug #5086: Report instance does not show in viewer after kar open Bug #5090: Report Layout interface is confusing wrt locking and switching to old layouts Bug #5095: test kepler and wrp for memory leaks Bug #5175: Fix remaining issues with exporting multiple runs into one KAR Bug #5284: Set uploadToServer to be true at configuration.xml Bug #5330: Workflow Run Manager - include provenance trace file in run-kar Bug #5413: large run deletion via the WRM with hsql provenance store takes a very long time and no gui feedback Bug #5425: error when running -nocache and no .kepler Bug #5429: improve default provenance store performance Bug #5591: Workflow Run Manager error downloading run for which module dependencies not satisfied Bug #5594: use input and output port icons in Items of Interest Bug #5640: associate timezones with all timestamps recorded in provenance tables Bug #5641: once timezones are added to provenance, Workflow Run Manager must utilize them Bug #4741: create icons for engineering view components Bug #4747: import & export site layout to SensorML Bug #4750: create wiring table gui Bug #4758: search for site components in kepler's data tab Bug #4763: create gui to access datalogger program Bug #4773: Data processing on the GPP Bug #5116: add lat/lon to sensor metadata and use during import Bug #5171: link workflow in components tree to workflow in scheduler view Bug #5202: update existing site layout with span changes Bug #5210: Focus stolen from user trying to drag components around during execution Bug #5252: Plotting bugs Bug #5313: fix Import Sensor Site and Export Site to KML menu item issues Bug #5341: Belkin f5u409 usb=>serial dongle periodically stops working Bug #5347: DataTurbine actor should support Start Time with sub-second accuracy Bug #5362: Create a GUI so user can easily archive a senosr's data from a dataturbine to a metacat Bug #5363: spanTodt performance Bug #5364: DataTurbine server memory error Bug #5377: DataTurbine actor fetch time outs (blockTimeout param not used?) Bug #5400: User can specify the interval of data chunk in the workflow archiving dataturbine data to metacat Bug #5582: DataTurbine server crashing the JRE
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