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Corinna Gries, 01/16/2014 01:52 PM
First Community Workshop¶
Goals¶
- Develop ideas for larger synthesis across systems
- Introduce scientists to the concept of workflow systems
- Introduce scientists to open data and methods sharing
- Gather requirements for collaboration tools that would allow scientists to use them and share data and workflows.
Participants¶
Ilkay Altintas, UC San Diego, altintas at sdsc.edu
Carl Boettiger, UC Davis, cboettig at gmail.com
Erica Christensen, Utah State, erica.christensen at weecology.org
Elsa Cleland, UCSD, ecleland at ucsd.edu
Scott Collins, U New Mexico, scollins at sevilleta.unm.edu
Sam Fey, Dartmouth, Samuel.B.Fey.GR at dartmouth.edu
Corinna Gries, U Wisconsin, cgries at wisc.edu
Lauren Hallett, Berkeley, lauren.m.hallett at gmail.com
Stan Harpole, Iowa State, harpole at iastate.edu
Dave Harris, UC Davis, harry491 at gmail.com
Matt Jones, UC Santa Barbara, jones at nceas.ucsb.edu
Sydney Jones, U New Mexico, syd at sevilleta.unm.edu
Julie Ripplinger, Arizona State University, julie.ripplinger at asu.edu
Andrew Rypel, WDNR, andrew.rypel at wisconsin.gov
David Seekell, UVa, das9xx at virginia.edu
Elizabeth Siddon, U. Alaska Fairbanks, ecsiddon at alaska.edu
Eric Sokol, Virginia Tech, sokole at vt.edu
Lizzie Wolkovitch, UCSD/Harvard, lizzie at biodiversity.ubc.ca, wolkovich at fas.harvard.edu
Agenda¶
| Wednesday February 5, 2014 | ||
|---|---|---|
| 8:30 am - 9:00 am | Welcome and introductions | Corinna |
| 9:00 am - 9:20 am | Project overview | Corinna, Scott, Matt |
| 9:20 am - 10:00 am | Intro to community metrics | Scott |
| 10:00 am - 10:30 am | Coffee Break | |
| 10:30 am - 11:00 am | Automating community metrics, data and workflow repositories and workflows | Matt |
| 11:00 am - 12:00 pm | Hands-on Kepler exercise 'making workflows portable' | Matt |
| 12:00 pm - 1:00 pm | Lunch | on your own |
| 1:00 pm - 2:00 pm | Round-the-room brainstorm community metrics | Scott plenary |
| 2:00 pm - 2:30 pm | Prioritize community metrics | Scott plenary |
| 2:30 pm - 3:00 pm | form working groups | plenary |
| 3:00 pm - 3:30 pm | Afternoon Break | |
| 3:30 pm - 5:30 pm | Community metrics implementation hackathons (R) | working groups |
| Thursday February 6, 2014 | ||
| 8:30 am - 10:00 am | Community metrics implementation hackathons (R) | working groups |
| 10:00 am - 10:30 am | Coffee Break | |
| 10:30 am - 12:00 pm | Community metrics implementation hackathons (Kepler) | working groups |
| 12:00 pm - 1:00 pm | Lunch | on your own |
| 1:00 pm - 2:00 pm | Discussion hackathon outcomes | plenary |
| 2:00 pm - 3:00 pm | Executing and sharing community metrics workflows | working groups |
| 3:00 pm - 3:30 pm | Afternoon Break | |
| 3:30 pm - 4:30 pm | Desiderata for sharing community metrics | working groups |
| 4:30 pm - 5:30 pm | Next steps - requirements for sharing workflows | plenary |
| Friday February 7, 2014 | ||
| 8:30 am - 10:00 am | Next steps - prioritized list of datasets, analyses, data operations, visualizations | plenary |
| 10:00 am - 10:30 am | Coffee Break | |
| 10:30 am - 12:00 pm | Next steps - research questions to be answered with diverse data and identified community metrics | plenary |
| 12:00 pm | Adjourn | |
Outcome¶
- Repository design requirements for sharing workflows
- list of community metrics
- list of data sets
- list of data transformation operations to get from raw data to analyses
- list of visualizations
- research collaborations: Ideas for ecological questions that can be answered with these data and metrics
Updated by Corinna Gries almost 11 years ago · 21 revisions