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From 02/25/2014 to 03/26/2014

03/26/2014

04:05 PM Revision 8714 (metacat): Use OBOE-SBC ontology for looking up concepts (it contains subclasses of our OBOE Characteristic and Standard superclasses). Restrict annotations to only subclasses that fit the OBOE model. Correct the xpointer and individual naming conventions so they are unique, but express the exact entity/attribute being annotated.
ben leinfelder
03:10 PM Revision 8713 (metacat): remove my api key. oops
ben leinfelder
03:02 PM Revision 8712 (metacat): add comment/pointer to BioPortal annotation service.
ben leinfelder
03:00 PM Revision 8711 (metacat): Include method to look up annotation classes from BioPortal. We still have OBOE-SBC in there, and theyhave the SWEET ontology. The suggestions returned are not perfect, but they can be better than nothing. Ideally, we'd only query a few ontologies so we don't end up using terms from medical ontologies that aren't really appropriate for our domain. https://projects.ecoinformatics.org/ecoinfo/issues/6256
ben leinfelder

03/24/2014

04:17 PM Revision 8710 (metacat): Add xpointer FragmentSelectors to each annotation.
Split attribute label into tokens to attempt matching to OBOE concepts. ben leinfelder

03/23/2014

12:11 AM Revision 8709 (metacat): include code to generate random annotations for UI testing. Effective, but can be confusing to see so many unrelated concepts on duplicate EML packages.
ben leinfelder

03/21/2014

05:07 PM Revision 8708 (metacat): include characteristic_sm field with SPARQL query
ben leinfelder
01:21 PM Revision 8707 (metacat): include SSLVerify* directives for client certificates and a pointer for getting the DataONE chain files.
ben leinfelder

03/19/2014

01:26 PM Revision 8706 (metacat): Added an explanation of "metacat context" to the Metacat Themes docs based on questions asked by an actual user following our instructions in the docs.
Lauren Walker

03/18/2014

12:18 PM Revision 8705 (metacat): Edited the docs to incude more details about creating a custom theme
Lauren Walker

03/14/2014

03:33 PM Revision 8704 (metacat): Remove the code to lookup alias dn in the getGroups method.
Jing Tao
01:16 PM Revision 8703 (metacat): Rather than directly to modify the env, we use context.addToEnv.
This fixed a bug in non-tls env, the alias log-in doesn't work. Jing Tao
10:59 AM Revision 8702 (metacat): first pass at generating annotations from EML attribute information. uses the OpenAnnotation model that the metacat-index tests assume which allows us to populate dynamic index fields for the annotation class[es]. There is still much to be done with finding appropriate concepts for each attribute. https://projects.ecoinformatics.org/ecoinfo/issues/6256
ben leinfelder
10:55 AM Revision 8701 (metacat): switch to index standard since it is more likely we will be able to determine this from our existing EML attribute information. https://projects.ecoinformatics.org/ecoinfo/issues/6253
ben leinfelder

03/06/2014

03:28 PM Revision 8700 (metacat): Edited the replicaPolicies script to print out a list of IDs that have a different authoritative member node, the number of successes, and failures at the end.
Lauren Walker

03/05/2014

11:46 AM Revision 8699 (metacat): Add comments to bash script to explain its function and dependencies
Lauren Walker
11:30 AM Revision 8698 (metacat): Added a bash script to call /replicaPolicies/{pid} via the DataONE API for all objects in a MN or a list of ids.
Lauren Walker

03/04/2014

10:23 AM Revision 8697 (metacat): Add the test class for the pisco account.
Jing Tao
10:22 AM Revision 8696 (metacat): Remove the test method for the pisco account since it maybe fails because of the fire wall issue.
Jing Tao
09:48 AM Revision 8695 (metacat): Add the login test of the pisco account.
Jing Tao
09:47 AM Revision 8694 (metacat): Add the pisco account.
Jing Tao

03/03/2014

04:33 PM Revision 8693 (metacat): Do a more thorough check that the characteristic annotation was successfully indexed as expected (semtools)
ben leinfelder
03:56 PM Revision 8692 (metacat): switch to the OpenAnnotation (OA) model for annotating datapackages with measurements/characteristics (semtools)
ben leinfelder
03:55 PM Revision 8691 (metacat): switch to the OpenAnnotation (OA) model for annotating datapackages with measurements/characteristics (semtools)
ben leinfelder
03:54 PM Revision 8690 (metacat): switch to the OpenAnnotation (OA) model for annotating datapackages with measurements/characteristics (semtools)
ben leinfelder
03:41 PM Revision 8689 (metacat): support content from all serverLocations when summarizing entity info (semtools)
ben leinfelder
09:30 AM Revision 8688 (metacat): bump the poms to 2.4.2
ben leinfelder

03/02/2014

06:26 PM Revision 8685 (metacat): merge from trunk: these open layers resources were not committed!
ben leinfelder

03/01/2014

03:28 PM Revision 8682 (metacat): merge from branch: more notes on 2.4.1 release in the readme
ben leinfelder

02/28/2014

04:39 PM Revision 8680 (metacat): Add a pisco test account.
Jing Tao
04:06 PM Revision 8678 (metacat): allow "+" in solr query syntax. https://projects.ecoinformatics.org/ecoinfo/issues/6435
ben leinfelder
01:53 PM Revision 8677 (metacat): Add a comment to warn the users not to change the password file path to a production one since it will be deleted.
Jing Tao
01:11 PM Revision 8675 (metacat): clear test password file so subsequent runs will not fail -- tests assume blank file to begin with.
ben leinfelder

02/27/2014

12:50 PM Revision 8673 (metacat): use local release of OpenLayers api so that it works over https with our secure deployments (openlayers.org does not offer the api from their servers using https).
ben leinfelder

02/26/2014

10:49 PM Revision 8670 (metacat): include read events when re-indexing obsoleted objects. https://projects.ecoinformatics.org/ecoinfo/issues/6424
ben leinfelder
05:05 PM Revision 8668 (metacat): Change the loginForm attributes which is generated by the logout action.
Jing Tao
04:19 PM Revision 8665 (metacat): Use the userManagement variable.
Jing Tao
04:19 PM Revision 8664 (metacat): Set the userManagementURL property.
Jing Tao
03:24 PM Revision 8662 (metacat): make the loginForm and logoutForm the onSubmit "false" and the method "post".
Jing Tao
10:29 AM Revision 8659 (metacat): remove metacarta map layer -- their WMS service is no longer responding.
ben leinfelder
07:55 AM Revision 8656 (metacat): update to use 2.4.1 so the trunk has all artifacts for upgrades.
ben leinfelder
07:47 AM Revision 8655 (metacat): simple upgrade scripts for version 2.4.1
ben leinfelder

02/25/2014

07:46 PM Revision 8652 (metacat): In the authenticate method, if metacat can't get user info, the login still can be successful.
Jing Tao
06:39 PM Revision 8651 (metacat): change a log information.
Jing Tao
06:31 PM Revision 8650 (metacat): In the getALiasedName method, the referral set to ignore. Since the alias name is the local referral, we need to set it to ignore.
Jing Tao
05:44 PM Revision 8649 (metacat): Change the password.
Jing Tao
04:32 PM Revision 8648 (metacat): test that obsoleted objects remain indexed, but are marked as obsoleted. https://projects.ecoinformatics.org/ecoinfo/issues/6424
ben leinfelder
04:14 PM Revision 8647 (metacat): recursively submit obsoleted objects for indexing when instructed. https://projects.ecoinformatics.org/ecoinfo/issues/6424
ben leinfelder
 

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