Metacat

some new code for debugging mmp

updated the populator

added code to run an squery for listObjects instead of an anyfield query

always re-write web.xml in case geoserver has been redeployed
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4307

Modified MetacatPopulator to deal with change in D1Client static methods.

added more code for new mmp requests

bug fixes

refactor checksum and some other stuff

include a default location for the Geoserver data directory (under the metcat deployment)

added some debug lines

rework geoserver configuration:
-geoserver context is set to 'geoserver' by default, but can be reconfigured
-data directory is set in the geoserver web.xml file (we have a template, set the value accordingly, then overwrite the deployed version in the geoserver webapp)...

add boolean return to indicate whether or not a property was modified

trying to get the new MMP handler working with ResourceHandler

updating commons-fileupload to 1.2.2

replicate works on metacat now. just waiting for roberts changes to the mmp clients

use local shape files if the Geoserver env variable is not set. They might also be the same

geoserver upgrade:
-remove embedded geoserver
-include geotools api and update spatial harvesting
-include simple template for using maps in skin (openlayers now, not mapbuilder)

new mmp code

refactored MMP handling

implementing replicate

removing code I just added

adding default url to test against

fixes for creating SM for legacy docs

fixing generateSystemMetadata

updated replicate to only use GET requests. added notes for tomorrows standup

use the detected document encoding when getting the outputstream writer from the response
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2495

fixed bug with http/https port

adding additional debugging info

undoing last commit

added additional debugging info

adding war version replacement token

fix for member variables but in the request wrapper

adding war version to node response

implemented health api

use debug level for request encoding message

new class

implemented ping

added url decoding to the filter

use detected document encoding or Metacat's default encoding (UTF-8)

use UTF-8 encoding when getting bytes from the DB and converting them into a string.
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2495

only call response.getWriter() when we are about to send text/xml to the client, otherwise we end of calling both getWriter() and getOutputStream() - resulting in an illegal state.

use detected XML encoding when reading/writing files
use UTF-8 as default when performing queries in the DB (assume DB is using UTF-8)
remove as many PrintWriters (uses system default character encoding only) as possible and construct OutputStreamWriters where explicit encoding can be given....

fixed a bug with trailing slashes

fix for paths with semi-colons or other 'reserved' characters in them for D1 rest services

added semi-colon id test

fixed bug where comparisons didn't work because of my change this morning

made this method more robust

fixed bug in new code

fixed bug where permission would get set to -1 for no good reason

typo - "dataset/pubDate"

add pubDate to return fields

use EML 2.1.1 and UTF-8

add support for EML 2.1.1

fix the setaccess() method so that it accepts strings not numbers (i.e. "read" not "4")

added response type

allow public access to log information when docid is given. IP and principal are not returned unless an administrator makes the request.

added the root registry node response

changed d1 url to knb/d1/....

organized code for inputstream handling

fixed date problem

add a timer to delete the temp file

removed dependency on InputStreamToOutputStream so that exceptions will be passed correctly.

return the identifier object instead of nothing

made delete serialize the identifier

got getChecksum working. working on delete now. all tests in d1clienttest now pass

changes for new d1 schemas

implemented crud.delete

changed date format a bit to get the parser to like it

implemented describeObject

filter ou=Account parameters as per #5244

Bug fix for #5241: OAI-PMH: ListRecords verb returns content containing XML processing instructions.

implemented crud.describe

adding getChecksum method

added milliseconds back onto date format

remove temp files after multipart read

got the streaming mime multipart working

still working on mmp stream parsing

working on integrating streaming mmp into resourceHandler

more work on streaming mmp support

getting closer to a non-memory bound solution for mime multipart de/encoding

fixed a couple bugs with dates and fixed a major bug where metacat was reading the entire document from the database everytime a DocumentImpl instance was created even though it didn't need to

changes for dataone .5 schema updates

updated all exception codes to match spec

fixed task 729

fixed a bunch of small errors, did some reformatting, and fixed a bug that I thought was fixed last week

fixed redmine task 864. Metacat will now download an http:// referenced schema when a reference is put in the xml_catalog table.

fixing redmine task 738

fixing trac bug 828

profiler code for metacat

exception to throw when the sax parse should stop

changed log labels per trac 843

fixed bug 818

updated the metacatpopulator to use the d1 eml parser to create system metadata in a smarter fashion.

better log message

more debugging for objectInfo problem

checking for a null objectformat

checking for a null objectformat

checking for a null objectformat

backtracking

add some error output