Metacat

Improvements to Harvester registration web form.

Changed index.jsp to fix bug 1232 so that it works on knb.ecoinformatics.org.

Added code to add and remove cookie from the index.jsp when a person logs in or logs out.

Replaced EML2.0.0 checkout tag from EML_2_0_0_FOR_METACAT to EML_2_0_0_FOR_METACAT_WITH_BUGFIX

Modifications to make JS search functions work in the knb2 skin.

CHnaged CVSROOT to use $USER so it needn't be modified as much.

New URL for metacat in settings file.

New alternative KNB skin. Duplicates much of what is on the KNB site, but
this skin can work standalone with metacat (ie, you do not need the KNB
web site to be installed). Modified the resultset.xsl to do some things
specific to this skin.

Added images to install-skin target.

Add diagnostic output

Get rid of some useless code.

Improve handling of default values.
Call fileNew() if no default Harvest List file is specified.
Improve documentation for default properties.

Scripts for running the Harvest List Editor

Add documentation for the Harvest List Editor.
Display the Harvester Registration web form as a HTML table instead of as text.

Fixed schema loading scripts to use the new ant token for the EML2 namespace.

Added utilities module dependency to the instructions.

New instructions, particularly regarding some of the problems I had on
postgres remembering how to set up the user access control and tcp connections.

Add a new variable httpserver.

Change the systemidserver to http://{httpserver}.

Add File Validate menu item
Add column to display the row number
Add name of file to the title bar
Load properties from .harvestListEditor in home directory instead
of from metacat.properties

Bat file for running the Harvest List Editor

Harvest List Editor, a GUI tool for editing Harvest List XML files

Fixed a bug which was introduced because 'eml2namespace' was replaced by 'eml2_0_0namespace' in metacat.properties

Add eml200 and eml210 namespace here.

Added params for EML2_0_0 and EML2_1_0

Add a example how to setup key.

Adding a new perl script. Running this script creates a new skin.

Store session attributes as username and password for consistency with Metacat

Improvements to Harvester registration form

Made initial changes for accepting EML version 2.1.0 in Metacat

Revised the api and ecogrid can use it easily.

Fixed a bug that couldn't find eml2 data format.

Improve Harvester registration login

fixed the bug that couldn't assign access rule for the data file come with morpho.

Change method accessNumberUsed to static method.

Change eml2 to eml200

Change the code when Eml parser name changed.

New class to replace EmlSAXHandler.

Rename this class to Eml200SAXHandler.

Remove harvester.properties. Harvester properties have been integrated
with metacat.properties.

Revise test suite after moving Harvester properties to metacat.properties.

Revise documentation after relocating Harvester properties to metacat.properties.

Add Harvester properties

Integrate Harvester properties with build.properties and metacat.properties.
Eliminate the need for a separate harvester.properties file.
Improve email message to the site to include more summary information.

Move from dev skin to knb skin

Fixed a bug in an earlier commit

Fixed bug# 1309. Also put a regex check on ending year and beginning year.

Made changes to fix bug # 1365.

Made changes to fix bug# 1303 and 1367.(Both are related)
Following variables can now be specifieD from the cfg file to control behaviour of the skin: hasKeyword, hasMethod, hasSpatial, hasTaxonomic and hasTemporal. Following two also can be used: spatialRequired and temporalRequired

Made changes to fix bug# 1303 and 1367.(Both are related)
Following variables can now be specifieD from the cfg file to control behaviour of the skin: hasKeyword, hasMethod, hasSpatial, hasTaxonomic and hasTemporal. Following two also can be used: spatialRequired and temporalRequired

Made changes to fix bug# 1303 and 1367.(Both are related) - corresponding changes need to be made in tmpl file and testing needs to be done before bugs can be closed.

fixed a bug in a previous commit.

Made changes to fix bug# 1388.

Replaced text field with drop down menu which lists all months and days.

Changes made to fix bug# 1302

Made changes to fix 1301. Works fine with eml2 - need to check if works with emlbeta6.

Initial suite of JUnit tests for Harvester code

Fixed bug # 1298

Fixed bug# 1298

Replaced instances of DocList with HarvestList

Refactored a number of methods to allow for more effective JUnit testing

Made changes to control whether a skin wants to use keywords or not. Keywords probably will be used by all skins alsways. But similar changes can be made for Geographic Coverage or Temporal COverage to control whether a particular section of the insert data template needs to be shown or not. This can be controlled from .cfg file. For example, in nceas.cfg is you define hasKeyword = false, none of the templates will show the keyword part. (Unless, you are using NCEAS skin and you try to modify a document which already has keywords.)

Removed beta6 specific code which is no longer being used.

Removed repetition of code. Also fixed the link to the modified file submitted from responseTemplate

Remove Harvester code from compile and jar targets.
Add testharvester target for independently testing Harvester code.

JUnit files for tseting Harvester code

Changes to comments

Replace Harvester dbDriver property with database property

Add Harvester documentation to the Metacat Tour

Added ou also to getprincipal output. So now organizationUnitName is also returned in getprincipal output.

Made changes so that PISCO and NRS trees are also returned in getPrincipals action.

Remove copy of schema file from harvester target

Allow user to set frequency to 0 for testing purposes

Modify schema location

Remove obsolete schema file

Harvest list schema

Sample harvest list XML file

Remove obsolete file

Fixed getprincipals output. Earlier DNs for LTER were in URL form. Now they appear in DN form.
Earlier:
ldap://knb.lternet.edu:389/DN,base
Now:
DN

Have to make changes so that PISCO and NRS also show up.

Shell script for running Harvester on Unix

Batch file for running Harvester on Windows

Add install-sql property for MS SQL Server
Add copy task to harvester target

Fixed two small bugs.

Made changes in XML that is sent back as result of action=getprincipals. Changes are as following:

1. <authSystem> tag contains organization attribute which specifies organization name
2. <user> tag now has <organization> tag which specifies the organization name of the user. This is being generated as null for LTER as of now.

Perl script for transfering documents from one metacat to another metacat. list_of_docids contains list of names of the documents that will be transfered.

Rename url property to defaultDB

Added the EventLog functionality to the servlet as action=getlog. Valid parameters are ipAddress, principal, docid, event, start, end. All parameters can be repeated except start and end.

Correct minor problems with foreign keys in Harvester tables

Partial implementation of a query facility for the access log. Need to fix problems with the date filtering, and tie this into the servlet action when completed and tested.

Interim checkin of EventLog reporting structure. Still basically incomplete but compiles.

Add three new Harvester tables

Omit HARVEST_OPERATION_TABLE and store harvest operations in properties file instead

Add new Harvest Operation Properties to replace the HARVEST_OPERATION_TABLE

Fixed the returndoctype bug in DBQuery as described in bug 1451. Now,
results are returned even if returndoctype is null, which is the
appropriate behavior.

Implement sending email reports to harvest administrator and site administrator

Patched to make the date-time value insertion work under oracle. Now it
tests fine under both oracle and postgres. Still need to write an
access/query function.

Updated build.xml to add targets for doing the 1.4 database sql upgrades.
Also note I made it work with both oracle and sql, and note that the MS
SQL Server sql scripts seem to be lacking -- some are missing. Need to
resolve this before release.

Added additional logging calls for read, upload, insert, update, delete, and
other commands. Now need to get a reporting function working and this
bug 101 will be largely finished.

Modified EventLog to eliminate the separate revision column and instead fold
that into the docid string. Log now includes read events, but need to update
the data sent there.

New EventLogTest modifying the log call to exclude revision.

Modified SQL scripts to add the new access_log table. I've partially tested this under postgres but have not yet tested under oracle.