Metacat

Added an attribute to the metacat shapefile called area_coef which is a function
of the areal extent of the datapackage -- so a datapackage which was related to
a global collection would have a large extent, whereas a 3-foot squared plot
would have a small extent. Also fixed a bug related to the ID field that was...

Added a function to strip out the whitespace that was around the bounding
coordinates retrieved from metacat, and also now writing the full set of
bounding coordiantes (east,west,south,north).

a test dataset with coordinate harvested from metacat october 1, 2005.

bug fix so that error is displayed if station or reserve is not selected

fix for the bug entered in previous fix

Fix for bug in QueryGroup. Didnt check if the QueryGroup returned empty string. E.g. in case of a % search.

Fixed javascript bugs

fixed the qformat.

Move the compile.path to init so it can get some property value.

Fixed bug in the trigger of xml_path_index table

Fixed bug which currentDocument maybe null.

Fixed bug which currentDocument may be null.

fixe bug which currentDoc maybe null.

Add code to transfer string to date type.

Add function transfer string to date.

Add date info.

Add info about date.

Changes according add data info.

Rewrite replication for revision document.

Add code to get date info

Fixed the bug in xml segment is not correct to express revision document list.

Remove the print out statement.

user jdbc-jar-name to replace the hard code zip file name

Fixed some bug in replication.

Added code to enter publication date into the dataset.

Add some drop command and fix the bug in creating xml_path_index table.

Fix for 2214. Allow 0 in coordinates now.

Fix for bug 2215. Error message is displayed if project name is not selected in the nceas skin.

Fix for bug 2217

Add the copy command for jdbc to war file. Otherwise in oracle, the servlet couldn't find jdbc driver.

Fix for bug 2218

Add code to handle deleted document replication.

Add code to handle replicate the deleted document.

Add method to get revision list in xml_revisions table for a given docid.

Add code to handle replication deleted docs.

Change setString to setInt for ticket account because driver changes.

Fixed a typo.

My thoughts on the metacat spatial architecture.

Refactored the build to use a <path> element for the classpath rather
than ant properties. This makes the classpath easier to manage, but required
changes throughout the build. I think everything should still build fine --
it works for me.

Upgraded the JDBC driver for postgres to the version 8 driver....

Added a target called metacat spatial to build the spatial stuff.

Add code to get revision table info

New class to handle replicated deleted doc.

Add default constructor and change some viriable to protected.

added code to define LOG_CONFIG_NAME

Added code to start threads which initiate indexing once insertion to xml_nodes is complete.

Removing the code that calls the indexing thread. This call will be made from documentImpl.java once document insertion and update is finished.

Added support for log4j to MetaCatUtil so that it can be used by Metacat code for logging.

Add a new indicator - is revision document.

Replacing debugMessage in metacat code with log4j methods for logging

Replacing debugMessage with log4j methods for logging

changing qformat to xml

Add code to check the if the user has permission to start or stop timed replication.

Add some null checking code in onList method.

Adding log4j jar file and log4j.properties file to lib dir

Add log4j jar to the lib path

Change sessionHash to static variable and add a static get method.

Use a util function to get replication server.

Fix for bug 2060.

Moved the call to starting of indexing thread from endDocument to DocumentImpl after commit has been done. This way when ever a document is indexed it has already been entered in xml_nodes and xml_documents

Use a util class to get local replication url.

Add code to trim server name white space.

Added three new options for specifying the moderators, allowed submitters and submitters who are not allowed

Modified MetaCatUtil to read metacat access control lists from metacat.properties. Also coded various methods which can be used to find out if a user is an admin, moderator or on allowed/denied submitter list.

Modified MetaCatServlet to check if a user is allowed to insert/update before insert and update is done.

Add another servlet url mapping for replication.

Add code to trim white space in server name.

Remove output stream from the constructor.

Persistant timed replication parameter.

Add new parameter into start action.

Formatting cleanup, fixed a missing 'private' declaration. Preparing for LSID integration work.

Use milliseconds.

This is a stand-alone app for converting utm coordinates to geocoordinates.

Small bugfixes to the oracle upgrade script for metacat 1.6

Add code to check if adminstor list is null.

Changed the headers.

This is the c++ code that is used to write the shapefile. This code requires
the shapelib.

Filed used my the Metacat Spatial Option. Generally these files represent
the portion of the spatial option that harvests spatial elements from a
Metacat, and stores the elements as a shapefile on the file system. This
option, at this point, is pretty much independent of the metacat application....

Removing support for site from pathquery.dtd

Removing support for 'site' from pathquery

Replaced SQL queries in getMaxDocid() which used INSTR with queries which dont use INSTR. Now the INSTR related computation is done in Java code

Modified the code so that users show up outside the groups also in the tree constructed by action=getPrincipals.

Added new methods to MetaCatUtil: isAdministrator and isModerator.

These methods are used to check if a given username is part of the admin and moderator list specified in metacat.properties

Modified DocumentImpl and MetaCatServlet to use these functions.

Added fix for http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2172.

normalize method now checks for & in the text passed to the method

Added the patch provided by Johnoel. Check out the following link to bugzilla for more info: http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2081

Add some method to setting replication start time.

Add new method to set options.

Change the format of replication start time.

add new timed replication setting properties.

Add some new properties for the timed replication setting.

Add some new filter for timed replication seting.

Added mapping for the replication servlet which were missing earlier.

Changes to the OBFS index and header html code so that restricted search on name, title, abstract, keywords etc is done. action=squery is used for this instead of action=query.

Changes to the NCEAS index and header html code so that restricted search on name, title, abstract, keywords etc is done. action=squery is used for this instead of action=query.

Changes to the NRS index and header html code so that restricted search on name, title, abstract, keywords etc is done. action=squery is used for this instead of action=query.

Bug fix in the javascript code for the esa skin

Following fixes to the ESA's index.html

> Changing the checkbox label to read 'Include data from the Knowledge Network for Biocomplexity'
> Change in Javascript so that KNB is searched when checkbox for Search KNB is clicked
-> Change so that the search term doesnt disappear after hitting the enter button.

Changes made to Basic Information so that it is cleas that the first name and last name fields refer to the metadata provider rather than the owner

(Commit by Saurabh Garg for Callie Bowdish)

Fixed the link to OBFS

The template for displaying the error is not executed when passwords are not same. Hence the user doesnt know what the error was. Fixed this.

Added px to the css files.

Modified the index.html file to have a link for search.

added b {
font-weight: bold:
} to accommodate Mac Safari browser

Added literalLayout, para and geographic Description to the list of paths to be indexed