Metacat

Began work on a web interface for configuring metacat at runtime. This system
checks the 'configured' property when metacat starts up. If configured=false, then
it loads an HTML form containing the properties that need to be set. The user configures the properties and they are written into the metacat.properties file. Then metacat needs to be restarted. ...

Eliminated the 'release' ant tag from the rest of the files. The 'release' property is still used in build.xml for creating releases, but the filter is no longer presnt. Now, when updating the metacat files for a release, you have to set the release version in both the build.xml and the metacat.properties files.

Eliminated unneeded log information in source code file.

Eliminated the MetacatUtil.printMessage() method in favor of using the Log4J debugging methods.

Removed the release ant token from all files in 'src'.

Changed the filename that is used when data files are downloaded and when XML files are downloaded in XML format. Now, data files use the format "docid-docname". See bug #2566.

initial import of html versions of spatial option documentation

initial import of html versions of spatial option documentation

Only run spatial cache regeneration once. Plus some fixes to spatial_query action api.

install.spatial no longer optional since metacat servlet requires some geotools libs. Spatial option can be still be turned off in metacat.properties

added new namespace to the kepler skin

Changed float object handling in spatial components in order to compile on jdk 1.4.2

Ensure that spatial cache respects changed access constraints for updated documents

Ensure that spatial cache respects changed access constraints for updated documents

example build properties files for win and ubuntu platforms

Added some install docs specific to ubuntu and windows setups

Trimmed down initial shapefiles. They must exist in order to start geoserver properly but there's no need for them to have actual data, just a dummy feature with the proper geometry type (multipoint, multipolygon).

Removed most (all?) of the deprecated spatial metacat code from head

Modified backup script to exclude the backup archives themselves rom the tar file.
This recursion had caused a disk full error at KNP.

changed the name of the repository

adding xml-apis

adding xalan.jar

fixed errors in xalan.jar location

read the schema-specific doc title from metacat properties

Correctly cache doc title in the spatial cache

Temporary fix for KML output; geoserver can only handle the points layer

fix to docid overrides to handle an empty result set

Fixed geometry logic to swap north and south if n < s

Reverting to previous QueryTerm.java that uses 'LIKE' for comparisons. This
allows substring matching to work properly, but prevents the postgres index
from being used. As a result, full table scans are done on the tables, causing
a major performance hit. Need to determine how to eliminate the use of LIKE...

Modifications to the table definitions to add indices that should be used
when searching the database. Added an upgrade script to create these
indices as well. Modified QueryTerm.java to use the '=' comparator rather
than 'LIKE' so that we can do index scans rather than table scans. This needs...

fixed point centroid calculation to reflect bboxs that cross the dateline

fixed point centroid calculation to reflect bboxs that cross the dateline

Fixed up some hardcoded paths in html map templates.

Make spatial query more accurate by actually intersecting geometries in addition to a simple bbox filter. Important for testing intersection of irregular shaped objects or multi-geometries

Added docid override mechanism to DBQuery. Bypasses the queryspec.printSQL method and creates an optimized docid query in cases (like the spatial query) where you know the docids a priori

updated SpecNet Home link to http://www.specnet.info

Updated spatial query to also look at point spatial cache as some documents may only be represented as a single point.

Rewrote spatial query handler to use geotools directly against the spatial cache.

Allow only public readable docs in the spatial cache

Remove geoserver error pages from web.xml and allow exceptions to pass through

Integrate map interface with knb2 skin

Added javadoc comments for all new spatial classes. Optimized the title query in SpatialDocument.

Removed old spatial classes

Minor cartographic fixes to geoserver SLDs

Fixed polygon generator for cases where bbox crosses the dateline or the poles

Fixed up mapbuilder config for knp skin

refactory java classes for spatial harvester

initial import of changes to metacat source and config files to support spatial option

inital import of html templates for web mapping

initial import of spatial libs, try2

adding xalan jars to the classpath so tht the compile works without errors.

changed the set of stylesheets which will be used for displaying eml-2.0.0 documents

Fixed parameter order for call to createSpatialQuery and fixed bounding box intersection logic.

Added OSUBS to the list of organizations.

Added OSUSB to the list.

updated README with changes for the current day.

added exception handler for normalize function. if StringIndexOutOfBoundsException is thrown then it is reported and nodedata value is forwarded without normalization.

Cleaned up the code with proper debug statements..

Replaced getIdentifyingName and ldapAuthenticate with new code. ldapAuthenticate will first try to form a secure connection. If the secure connection fails then based on the value specified
in metacat.properties, an insecure connection will be made. authenticate() function first tries to connect using the dn specified with the default ldap base and url. in case that fails,...

Added variables to specify whether only secure ldap connections should be allowed for aunthentication.

Added list of changes which are made for the 1.6 release

Update to reflect newer versions of ant, java sdk and postgres

removed the code which copies eml-2.0.09 stylesheets

Remove CR characters that were accidentally added with last commit.

Modified the sql commands such that eml-2.0.1 stylesheets are used for displaying eml-2.0.0 documents

changed padding-left value of .tablehead selector to pixel rather than percent value to fix IE autostretch problem

Correct problem with image files in skins sub-directories being corrupted by token filtering. The exclude and include tags needed to have relative paths that include sub-directories.

Remove unused images from lter skin.

updated the tag which has to be checked out for eml-2.0.1

Add qformat parameter in call to executeAdvancedSearch() method.

Refactor code to get the relative paths of the resultset XSL and search results JSP from the MetacatHelper class rather than hard-coded.

Change relative path to the login page.

Add new methods getResultsetXSL and getResultsJSP.

Add qformat parameter to runQuery() and executeAdvancedSearch() methods.

Omit unused StringTokenizer objects.

Add qformat parameter to resultsetToHTML() method. Set the qformat paramater in the transformer if it is specified.

Add serialVersionUID class variable to eliminate Eclipse warnings.

Major upgrade of lter skin. The skin now integrates the functionality of the advanced query web application (previously a separate web app) directly into the skin.

Allow admin to update any document

check for nullpointerexception

Fix for a bug in MetacatServlet. Metacat assumed that it is supposed to get the schema information from the second line of the document. This is based
on the assumption that xml decleration will always be present. This is good practice but not required. Hence the fix -> Metacat should ignore the...

Add some new fields into index element properties which david asked.

Omit the html, head, title, and body tags from the advanced search results jsp. These tags are generated in the resultset.xml stylesheet, so they are redundant here.

added message explaining procedure to obtain organization-affiliated accounts

Add new index elements for ecogrid registry in order to improve search speed.

Fix for bug# 2371

Modified code so that database is queried just once when a document is read. Currently the read is being done in the constructor and then again in
the function.

Two changes to Metacat Harvester implementation:

(1) Removed call to deprecated Thread.stop() method. Added boolean class variable, Harvester.keepRunning. When the thread is destroyed, set Harvester.keepRunning to false.

(2) Access the harvestList.xsd schema file by finding it locally in the web application rather than via a URL to cvs.ecoinformatics.org.

added function to get list of projects for NCEAS from a given project list

Add info for deploy ecogrid.

fixed bugs in teh client that were preventing the lsid service from working right

altered build file to reflect the non-existence of build_new.xml in the ecogrid

modified the client so it will work consistently with the web service

updated the client so it throws a DocumentNotFoundException if you attempt to read a docuemnt that doesn't exist

fix to the earlier commit. the code was dependent on 1.5. this one isnt

fix to the generateDocid() function so that the docid generated always is bigger than the earlier one.

Missed a period.

Patch to make the getLastDocid function actually work on the text node.

Patch for making getlastdocid work when the identifier is a large number
greater than can be encompassed by an int. Now it uses a long to
represent the number, which doesn't solve the problem but probably does
make it work for the vast majority of cases.

Added ref to the FGDC schema that I forgot to check in earlier.

Fixed typos in the build that were preventing the tests from running.

Added new function getLastDocid to the metacat client so that it is
accessible to clients that need it.