Metacat

include shared method in superclass

include value elements for translations in EML 2.1.1

create another test for various i18n features including eml 2.1.1
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2495

use UTF-8 encoding when getting bytes from the DB and converting them into a string.
http://bugzilla.ecoinformatics.org/show_bug.cgi?id=2495

only call response.getWriter() when we are about to send text/xml to the client, otherwise we end of calling both getWriter() and getOutputStream() - resulting in an illegal state.

uncomment the other test cases and make sure we do the clean up when the tests are complete (delete the uploaded documents)

copy, compile, and run the test classes using UTF-8 encoding since they contain special characters

use detected XML encoding when reading/writing files
use UTF-8 as default when performing queries in the DB (assume DB is using UTF-8)
remove as many PrintWriters (uses system default character encoding only) as possible and construct OutputStreamWriters where explicit encoding can be given....

fixed a bug with trailing slashes

fix for paths with semi-colons or other 'reserved' characters in them for D1 rest services

correct the prolog

changed test to use actual semi-colons instead of colons

add XmlStreamReader test for determining encoding

added semi-colon id test

found a failure when using an InputStreamReader without an encoding

a test to explore character encoding with utf8 chars

-remove owner/org metadata but leave keywords
-include labelWidth param for formatting the left hand labels

fixed bug where comparisons didn't work because of my change this morning

made this method more robust

inclue shorter model summary for the attributes when displaying in the resultset stylesheet

make links more intuitive with () and formatting

remove old annotation details template

separate template for citation; padding for EML details

let subGroup_border (tables) maintain white background even when they are in a shaded container (results set)

fixed bug in new code

fixed bug where permission would get set to -1 for no good reason

use 100% table widths

include more details in the Citation section

typo - "dataset/pubDate"

add pubDate to return fields

don't install into /tmp

refactor/modularize the templates for easier reuse

include annotation id in the xsl:key so that attribute-measurement mappings can be made for each annotation without confusing them across annotations.

remove the containing border - was too busy

include annotation ID in the data table display link so that the style sheet can effectively look up the additional semantic annotation for that data entity.

handle references and original attribute names the same when loading annotation measurements for the column

lookup the annotation details for each column in the data table

use span instead of p tag for showing the full uri of the classes

include template for rendering a single attribute

style the results for ajax stats call

include additional parameters added since sbclter modified these stylesheets.
also remove the duplicate param that caused xslt processors to fail (sometimes)

include citation information at top of page

use the data package title in the header rather than just "Data Set Description"

comment out the "in XXX data catalog system"

use saxon for xpath 2.0 functions since xalan only does 1.0

use EML 2.1.1 and UTF-8

handle i18n translation elements that are included in eml 2.1.1

support EML 2.1.1

include anonymous parameter when getting report

include EML 2.1.1 documents in skin (path query search, mostly)

add support for EML 2.1.1

fix the setaccess() method so that it accepts strings not numbers (i.e. "read" not "4")

do not use replace() XPath function - it is 2.0 (not in Xalan)

increase height of the iframe classes to accommodate content

catch error when jQuery is not included in the page, but do nothing

include loadStats() method in branding.js to be reused more widely (with qformat parameter)

move jquery and jquery plugins from semtools to common directory - reuse in default skin

add download count for data entities (online distribution)

use simple mode - just read events tallied

make call to load stats when displaying the data package information

include stats for annotation and data package

include jquery and loadStats() method (in search.js)

use contextURL parameter

add stats to semtools

added response type

add stylesheet for rendering simple stats for access log

allow public access to log information when docid is given. IP and principal are not returned unless an administrator makes the request.

added the root registry node response

changed d1 url to knb/d1/....

Make resultset more data package centric

select the tree node when exact match is found

check for exact class match when typing into search term - if there is one, then select it as the chosen term

always open the top level node of the tree when it loads

do not show visual indication of "focused" tree - it looks random because it mostly is (at least when refeshing it with the current active domain - the calls are all asynchronous so we don't ever really know which one will be created last and therefore gain the focus)

load search results when page first loads (browsing - no query constraints)

remove special ">>" character from style sheet
use absolute path to the spinner animated gif

organized code for inputstream handling

new client jar

fixed date problem

add a timer to delete the temp file

removed dependency on InputStreamToOutputStream so that exceptions will be passed correctly.

include busy spinner when loading search results

using div tags for the search results now (with some tables too)

commit before trying div-only resultset

hide/show search result details for each matched row.

return the identifier object instead of nothing

made delete serialize the identifier

-use a tab for search options
-search results are in their own container now
-jquery ui and semtools css share same corner radius
-removed form-based "link" in resultset xsl

new values for updated schemas

got getChecksum working. working on delete now. all tests in d1clienttest now pass

use jquery UI tabs to separate the Measurement criteria from E,C,P

-"Clear" button actually clears the form and refreshes the search results w/o constraints
-active domain check boxes are honored when refreshing active domain after selection is made in a different tree

"remember" selected/opened nodes when active domain is filtered on click. also using separate cookies for each tree so that it can remember it's state on page reload.

refresh the other trees with active domain when selection is made.
TODO: remember last selected node in the tree and open the tree to that node

asynchronously load search results after each tree selection event

add checkbox for active domain pruning on each tree.

prune the search tree - keep parents and children of matched nodes

set the selected concept as the value in the search field

remove bioportal search fields

include scroll bars for the jsTrees