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  • svn:ignore: build
  • svn:mergeinfo: /branches/D1_0_6_2_BRANCH:6107-6121

# Date Author Comment
9237 07/09/2015 02:09 PM ben leinfelder

use v1 and v2 xsl as appropriate for rendering d1 types (object format list, mostly)

9236 07/09/2015 01:59 PM Jing Tao

Add an iso text file.

9235 07/08/2015 05:03 PM ben leinfelder

use MediaType from v2.SystemMetadata and v2.ObjectFormat to better determine mime-type, charset and filename for the get() method. https://redmine.dataone.org/issues/3309

9234 07/08/2015 05:01 PM ben leinfelder

correct logout method (old change still in workspace)

9233 07/08/2015 02:42 PM Jing Tao

Add a junit test case to test the write/read of new fields in the system metadata.

9232 07/08/2015 01:07 PM Jing Tao

Add the test suite.

9231 07/08/2015 11:53 AM Jing Tao

Fixed a bug that two columns were missing in the sql command.

9230 07/07/2015 04:35 PM Jing Tao

Add the code to read/write the new system metadata fields - file name, media type and media type properties into the db tables.

9229 07/06/2015 04:22 PM Jing Tao

Add code to update smmediatypeproperties table.

9228 06/23/2015 08:48 AM ben leinfelder

add logout implementation - calls server and clears cookie jar.

9227 06/01/2015 02:25 PM Jing Tao

Add the code to create smMediaTypeProperties table.

9226 05/29/2015 10:01 PM Jing Tao

Add the code to create a new table smMediaTypeProperties.

9225 05/29/2015 10:00 PM Jing Tao

Change the name of the foreign key on the smMediaTypeProperties.

9224 05/29/2015 09:49 PM Jing Tao

Add a new table smMediaTypeProperties to store the properties associated with a media type.

9223 05/29/2015 02:59 PM Jing Tao

Add a new version of the schema.

9220 05/28/2015 03:11 PM Jing Tao

Throw an exception if the saving system metadata fails.

9219 05/28/2015 01:19 PM Jing Tao

Add the code to roll back the saved system metadata if the object can't be saved.

9218 05/20/2015 02:49 PM Jing Tao

Add the media_type and file_name columns.

9217 05/20/2015 02:49 PM Jing Tao

Add the media_type and file_name columns.

9216 05/20/2015 02:48 PM Jing Tao

Add two columns media_type and file_name.

9215 05/20/2015 02:47 PM Jing Tao

Add the media_type and file_name columns.

9214 05/15/2015 10:19 AM Lauren Walker

Index science metadata fields for the Dublin Core Extended metadata format. - Use d1_cn_index_processor 1.4.5 in metacat-index and update beans with new dcx subprocessor and xsi namespace

9212 05/13/2015 04:25 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.

9211 05/13/2015 04:24 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.
Fixed the bug the new column should be series_id rather than guid.

9210 05/13/2015 04:23 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.

9209 05/13/2015 04:22 PM Jing Tao

Add the code to add dataone schema v2 in the xml_catalog table.

9208 05/13/2015 03:35 PM Jing Tao

Add the data schema from dataone svn trunk. It maybe needs to be updated in future.

9207 05/13/2015 02:39 PM Jing Tao

Add a hash of a new index schema.

9206 05/11/2015 10:43 PM Jing Tao

Don't use ssClient as a class field. Now it is a local variable. This fixed an issue that two statements using the client caused the exception - java.net.SocketTimeoutException: Read timed out.

9205 05/11/2015 05:19 PM Jing Tao

Uncomment the code to copy the log4j.properties file to web-inf.

9204 05/11/2015 02:09 PM rnahf

refs: #7092. found another unclosed inputStream, this time in ReplicationService.handleForceReplicationDataFileRequest(...).

9203 05/11/2015 12:28 PM rnahf

fixes #7092: added finally clause to ReplicationHandler.update method to unconditionally close the inputStreams it keeps in a Vector. Needs testing.

9202 05/08/2015 11:11 AM Jing Tao

Use the wild card in the class path. So it will not be pain if the jar files were changed.

9201 05/07/2015 06:14 PM Jing Tao

Add the code to test scenario that a user tries to update an archived object.

9200 05/07/2015 06:13 PM Jing Tao

Add the code to check if the client is trying to update an archived object. If it is, reject it.

9199 05/07/2015 12:22 PM Lauren Walker

Move the dataset metadata label for metacatui EML

9198 05/07/2015 10:41 AM Lauren Walker

Mark the entity metadata sections in metacatui EML transformations

9197 05/06/2015 05:35 PM Jing Tao

Use the ecogrid 1.2.3 tag to replace the branch.

9195 05/06/2015 05:04 PM Jing Tao

Fixed an null pointer issue in this class.

9194 05/05/2015 04:29 PM Lauren Walker

Changed the FGDC MetacatUI theme translation so that it displays nicely in MetacatUI and works correctly

9193 05/05/2015 09:48 AM Jing Tao

comment the statement related to the removed file lib/oa4mp_client.xml.

9192 05/01/2015 04:56 PM Jing Tao

Add a new method -updateSystemMetadata. It only can be called by CNs.

9191 05/01/2015 04:27 PM Jing Tao

Add more scenario for check isAuthorized.

9190 05/01/2015 04:25 PM Jing Tao

Refactory the authorize methods on D1NodeService.
Add the check for whom can call mn.updatesystemMetadata.

9189 05/01/2015 02:59 PM Jing Tao

Committed the change which Andreit did.
1. Add the code for synchronize(not implemented)
2. Add the code for addForm.

9188 05/01/2015 02:27 PM Jing Tao

Make target and source code to be compatiable to java 1.7 rather than 1.6.

9187 05/01/2015 11:37 AM Jing Tao

Get the node id from the metacat.properties instead of the hard coded one.

9186 05/01/2015 11:08 AM Jing Tao

Modified the dataone.nodeid from blank to urn:node:METACAT_TEST. Now the mn.updateSystemMetadata only allows be called on the authoritative node of a pid. In order to make junit test work, we need to have a value there.

9185 04/30/2015 02:11 PM Jing Tao

Remove the obsoleted test class.

9184 04/30/2015 02:10 PM Jing Tao

Removed the obsoleted test class.

9183 04/30/2015 01:28 PM ben leinfelder

remove portal servlet and configuration - no need for this if we are supporting auth tokens from authentication service.

9182 04/30/2015 01:22 PM ben leinfelder

defer to D1 PortalCertificateManager to pull authentication credentials from the request before defering to old Metacat cookie session

9181 04/30/2015 10:40 AM Jing Tao

Now for the untrusted certificate, the client throws an exception rather than returning null.

9180 04/30/2015 09:52 AM Jing Tao

Add a initial test.

9179 04/30/2015 09:38 AM Jing Tao

Add a test in it. Otherwise it failed and said there is not tests found.

9178 04/29/2015 04:41 PM Jing Tao

Add the code to check the authorization of the client which is reindexing a pid.

9177 04/22/2015 05:01 PM Jing Tao

Created the updateSystemMetadata method.

9176 04/22/2015 03:52 PM Jing Tao

Add the code to check if the current node is the authoritative node for the the given pid.

9175 04/21/2015 02:35 PM Jing Tao

Add the check of permission to update the system metadata.

9174 04/15/2015 10:33 AM ben leinfelder

include 2.4.3 release notes from branch

9173 04/14/2015 04:40 PM ben leinfelder

add whoami endpoint to make debugging authn/authz easier as we use additional mechanisms for proving identity.

9172 04/14/2015 02:46 PM ben leinfelder

include 2.4.3 upgrade scripts in the trunk (merged from branch)

9171 04/14/2015 02:44 PM Jing Tao

Change the test case base on the change on checking sid of the create method.

9170 04/14/2015 02:43 PM Jing Tao

Remove the code to check sid on create and registerSystemMetadata.

9169 04/14/2015 02:35 PM ben leinfelder

remove d1_annotator servlet from web xml - not used anymore

9168 04/14/2015 02:29 PM Jing Tao

Fixed a bug that put the detail code in a wrong position.

9167 04/13/2015 06:19 PM Jing Tao

Add the junit test for testing the updateSystemMetadata method.

9166 04/13/2015 06:18 PM Jing Tao

Add the code to check if a user tries to modify an immutable field on system metadata.

9165 04/10/2015 04:19 PM Jing Tao

If an Event object is null in the v1 log entry, we won't add it to the log.

9164 04/10/2015 10:21 AM ben leinfelder

use singleton for getting JWT token - refactor in d1_portal project

9163 04/08/2015 04:18 PM Lauren Walker

Remove the "#none" href attribute from links in the MetacatUI metadata entry form.

9162 04/07/2015 09:33 AM ben leinfelder

add notes about when metacat-index.war and metacatui.war files should be deployed.

9161 04/03/2015 10:38 AM ben leinfelder

use secure context url for loading XSLTs in db transform

9160 04/01/2015 06:03 AM ben leinfelder

remove d1_annotator and tests from project -- should be used elsewhere.

9159 03/31/2015 04:07 PM ben leinfelder

include d1_annotator dependency

9158 03/31/2015 04:06 PM Jing Tao

Add a code to test the getLogRecord method handling SID.

9157 03/24/2015 01:24 PM Jing Tao

Change the schema test according the change on the schema itself.

9156 03/24/2015 01:14 PM rnahf

ReplicationServices.getUrlStream(url) callers were not closing the inputstream properly, as was revealed when switching to libclient v2 (a pooling connection manager in HttpClient) and encountering reasource leaks.

9155 03/19/2015 11:20 AM ben leinfelder

merge CN annotation context files to metacat (MN) to support semantic index fields.

9154 03/19/2015 09:45 AM ben leinfelder

merge CN solr schema to metacat (MN) to support prov and semantic index fields.

9153 03/18/2015 02:26 PM ben leinfelder

remove classes annotator classes that have moved to a different project under dataone's github.

9152 03/18/2015 12:09 PM rnahf

bullet-proofed exception handling in ReplicationService.getURLStream, to make sure client communication exceptions are handled and logged.

9151 03/17/2015 04:57 PM rnahf

fixed getSSLClient method.

9150 03/17/2015 02:47 PM rnahf

fixed class name typo.

9149 03/17/2015 02:15 PM rnahf

fixed private getSSLClient method for HttpClient v4.3 compatibility. Now also caching the RestClient for reuse to save overhead.

9148 03/09/2015 06:29 PM Jing Tao

Make the REST api work for views.

9147 03/09/2015 05:21 PM Jing Tao

Add the junit test method for listViews.

9146 03/09/2015 05:19 PM Jing Tao

Add the code to support CNView interface in CNodeService. Both CNodeService and MNodeService share the same code base.

9145 03/09/2015 03:37 PM Lauren Walker

Add classes and attributes to the object name and online distribution link elements in the MetacatUI theme.

9144 03/06/2015 05:38 PM Jing Tao

Add a test method to test v1.getFormat.

9143 03/06/2015 05:29 PM Jing Tao

Transform the ObjectFormat from v2 to v1 in getFormat method.

9142 03/06/2015 02:48 PM ben leinfelder

do not require site parameter if registry.show.siteList=false.
https://projects.ecoinformatics.org/ecoinfo/issues/6687

9141 03/06/2015 02:10 PM Jing Tao

Make them executable.

9140 03/05/2015 11:05 PM Jing Tao

Add a script file to restore knb db from a dumped file.

9139 03/05/2015 11:02 PM Jing Tao

Add a script to dump the knb database.

9138 03/05/2015 02:47 PM ben leinfelder

add step about enabling CGI module.
https://projects.ecoinformatics.org/ecoinfo/issues/6678

9137 03/05/2015 02:18 PM Jing Tao

Add a read timeout for the connection. See bug https://projects.ecoinformatics.org/ecoinfo/issues/6684:wq

9136 03/04/2015 03:23 PM ben leinfelder

remove unnecessary Make step in registry installation instructions.
https://projects.ecoinformatics.org/ecoinfo/issues/6678

9135 02/27/2015 02:44 PM Lauren Walker
  • Use the cite tag for the MetacatUI skin citation
  • Take out extra divs in the MetacatUI skin that are not necessary
  • Add a placeholder for the package contents table in the MetacatUI skin
  • Classify more of the HTML tags with their content type so MetacatUI can find content more efficiently...
9134 02/25/2015 12:35 PM Lauren Walker

Display text nodes in EML when the value is directly in the text node or in a <section> tag or in a <para> tag (in metacatui skin)