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Revision 182

Added by Matt Jones over 24 years ago

updated javadoc documentation

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index-all.html
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<HTML>
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<HEAD>
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<TITLE>
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MetaCat API: Index
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</TABLE>
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<!-- =========== END OF NAVBAR =========== -->
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<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <A HREF="#_X_">X</A> <HR>
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<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_Q_">Q</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <A HREF="#_X_">X</A> <HR>
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<A NAME="_A_"><!-- --></A><H2>
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<B>A</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html"><B>AccessionNumber</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>.<DD>A class that gets Accession Number, check for uniqueness and register it
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 into db connection<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html#AccessionNumber()"><B>AccessionNumber()</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#addChildNode(edu.ucsb.nceas.metacat.BasicNode)"><B>addChildNode(BasicNode)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Add a child node to this node
......
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#characters(char[], int, int)"><B>characters(char[], int, int)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called for each XML text node
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#characters(char[], int, int)"><B>characters(char[], int, int)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
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<DD>callback method used by the SAX Parser when the text sequences of an 
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 xml stream are detected.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#comment(java.lang.String)"><B>comment(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler called once for each comment found: 
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 node that comment may occur before or after the root element.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#createQuery(java.lang.String)"><B>createQuery(String)</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>format a simple free-text value query as an XML document that conforms
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 to the pathquery.dtd and is appropriate for submission to the DBQuery
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 structured query engine
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#createQuery(java.lang.String, java.lang.String)"><B>createQuery(String, String)</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>format a simple free-text value query as an XML document that conforms
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 to the pathquery.dtd and is appropriate for submission to the DBQuery
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 structured query engine
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</DL>
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<HR>
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<A NAME="_D_"><!-- --></A><H2>
......
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#dbg(int)"><B>dbg(int)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html"><B>DBQuery</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>.<DD>A Class that searches a relational DB for elements and 
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 attributes that have free text matches a query string,
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 or structured query matches to a path specified node in the 
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 XML hierarchy.<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#DBQuery(java.sql.Connection, java.lang.String)"><B>DBQuery(Connection, String)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>construct an instance of the DBQuery class 
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html"><B>DBReader</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>.<DD>A Class that creates an XML text document
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 from a query to a relational DB containing a DOM representation<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html"><B>DBReader.DoctypeInfo</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>.<DD>A utility class that encapsulates document type information<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#DBReader.DoctypeInfo(edu.ucsb.nceas.metacat.DBReader, java.lang.String, java.lang.String, java.lang.String)"><B>DBReader.DoctypeInfo(DBReader, String, String, String)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
......
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 can write its own representation to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#DBSAXNode(java.sql.Connection, java.lang.String)"><B>DBSAXNode(Connection, String)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
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<DD>Construct a new node instance for DOCUMENT nodes
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#DBSAXNode(java.sql.Connection, java.lang.String, edu.ucsb.nceas.metacat.DBSAXNode)"><B>DBSAXNode(Connection, String, DBSAXNode)</B></A> - 
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#DBSAXNode(java.sql.Connection, java.lang.String, edu.ucsb.nceas.metacat.DBSAXNode, edu.ucsb.nceas.metacat.DBSAXNode, edu.ucsb.nceas.metacat.DBSAXDocument)"><B>DBSAXNode(Connection, String, DBSAXNode, DBSAXNode, DBSAXDocument)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
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<DD>Construct a new node instance for ELEMENT nodes
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html"><B>DBSAXWriter</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html">DBSAXWriter</A>.<DD>A Class that reads in an XML text document and
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 write its contents to a database connection using SAX<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html#DBSAXWriter(java.io.Reader, java.sql.Connection)"><B>DBSAXWriter(Reader, Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html">DBSAXWriter</A>
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<DD>construct a new instance of the class to write an XML file to the database
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html#DBSAXWriter(java.lang.String, java.sql.Connection)"><B>DBSAXWriter(String, Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html">DBSAXWriter</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html"><B>DBSimpleQuery</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>.<DD>A Class that searches a relational DB for elements and attributes that
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 have free text matches to the query string.<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#DBSimpleQuery(java.sql.Connection)"><B>DBSimpleQuery(Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
......
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html"><B>DBTransform</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>.<DD>A Class that transforms XML documents utitlizing XSL style sheets<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#DBTransform(java.sql.Connection)"><B>DBTransform(Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
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<DD>construct a DBTransform instance.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html"><B>DBWriter</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>.<DD>A Class that reads in an XML text document and
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 write its contents to a database connection using SAX<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#DBWriter(java.io.Reader, java.sql.Connection)"><B>DBWriter(Reader, Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
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<DD>construct a new instance of the class to write an XML file to the database
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#DBWriter(java.lang.String, java.sql.Connection)"><B>DBWriter(String, Connection)</B></A> - 
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#doGet(javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)"><B>doGet(HttpServletRequest, HttpServletResponse)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
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<DD>Handle "GET" method requests from HTTP clients
......
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endElement(oracle.xml.parser.v2.NSName)"><B>endElement(NSName)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called at the end of each XML element
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#endElement(java.lang.String)"><B>endElement(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
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<DD>callback method used by the SAX Parser when the end tag of an 
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 element is detected.
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</DL>
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<HR>
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<A NAME="_F_"><!-- --></A><H2>
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<B>F</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html#fileToURL(java.io.File)"><B>fileToURL(File)</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html">DBSAXWriter</A>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#fileToURL(java.io.File)"><B>fileToURL(File)</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
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<DD>Utility method to convert a file handle into a URL
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#findDocuments(java.io.Reader)"><B>findDocuments(Reader)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>routine to search the elements and attributes looking to match query
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#findDocuments(java.lang.String)"><B>findDocuments(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
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<DD>routine to search the elements and attributes looking to match query
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#findDocuments(java.lang.String, java.lang.String)"><B>findDocuments(String, String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
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<DD>routine to search the elements and attributes looking to match query
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</DL>
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<HR>
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<A NAME="_G_"><!-- --></A><H2>
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<B>G</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html#generate(java.lang.String, java.lang.String)"><B>generate(String, String)</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>
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<DD>This method gets Accession Number (if any), check for uniqueness 
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 and register it into new db connection
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<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html"><B>GenericXMLValidate</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>.<DD>Name: GenericXMLValidate.java
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       Purpose: A Class that validates XML documents
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 			   This class is designed to be 'parser independent
......
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getChildren()"><B>getChildren()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Get the an enumeration of the children of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getDocID()"><B>getDocID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Get the doc id of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getDocID()"><B>getDocID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
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<DD>Get doc id
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDocname()"><B>getDocname()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>get the document name
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDoctype()"><B>getDoctype()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>get the document type
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getDoctypeInfo(long)"><B>getDoctypeInfo(long)</B></A> - 
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getDoctypeInfo(java.lang.String)"><B>getDoctypeInfo(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>Look up the document type information from the database
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<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#getNodeData()"><B>getNodeData()</B></A> - 
......
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getParentID()"><B>getParentID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Get the parent id of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getRootNode(long)"><B>getRootNode(long)</B></A> - 
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#getParentNode()"><B>getParentNode()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
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<DD>get the parent of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getRootNode(java.lang.String)"><B>getRootNode(String)</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>Get the root node id for an XML document given a document id
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getRootNodeID()"><B>getRootNodeID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Get the root node id of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getSystemID()"><B>getSystemID()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>get the system identifier
......
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getTagName()"><B>getTagName()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Get the name of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getTitle()"><B>getTitle()</B></A> - 
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
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<DD>Get the document title
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</DL>
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<HR>
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<A NAME="_I_"><!-- --></A><H2>
......
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
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<DD>the main routine used to test the transform utility.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>the main routine used to test the DBQuery utility.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
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<DD>the main routine used to test the DBWriter utility.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>main routine used for testing.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXWriter.html">DBSAXWriter</A>
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<DD>the main routine used to test the DBSAXWriter utility.
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<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
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<DD>the main routine used to test the DBSimpleQuery utility.
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#main(java.lang.String[])"><B>main(String[])</B></A> - 
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
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<DD>Main routine for testing
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html"><B>MetaCatServlet</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>.<DD>A metadata catalog server implemented as a Java Servlet
278 339

  
279 340
 <DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#MetaCatServlet()"><B>MetaCatServlet()</B></A> - 
......
303 364
<A NAME="_P_"><!-- --></A><H2>
304 365
<B>P</B></H2>
305 366
<DL>
367
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#printSQL()"><B>printSQL()</B></A> - 
368
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
369
<DD>create a SQL serialization of the query that this instance represents
306 370
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#processingInstruction(java.lang.String, java.lang.String)"><B>processingInstruction(String, String)</B></A> - 
307 371
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
308 372
<DD>SAX Handler called once for each processing instruction found: 
309 373
 node that PI may occur before or after the root element.
310 374
</DL>
311 375
<HR>
376
<A NAME="_Q_"><!-- --></A><H2>
377
<B>Q</B></H2>
378
<DL>
379
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html"><B>QuerySpecification</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>.<DD>A Class that represents a structured query, and can be 
380
 constructed from an XML serialization conforming to @see pathquery.dtd.<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#QuerySpecification(java.io.Reader, java.lang.String)"><B>QuerySpecification(Reader, String)</B></A> - 
381
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
382
<DD>construct an instance of the QuerySpecification class
383
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#QuerySpecification(java.lang.String, java.lang.String)"><B>QuerySpecification(String, String)</B></A> - 
384
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
385
<DD>construct an instance of the QuerySpecification class
386
</DL>
387
<HR>
312 388
<A NAME="_R_"><!-- --></A><H2>
313 389
<B>R</B></H2>
314 390
<DL>
315
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#readXMLDocument(long)"><B>readXMLDocument(long)</B></A> - 
391
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#readXMLDocument(java.lang.String)"><B>readXMLDocument(String)</B></A> - 
316 392
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
317 393
<DD>Create an XML document from the database starting with the element 
318 394
 having element_id nodeid
......
336 412
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#setAttribute(java.lang.String, java.lang.String)"><B>setAttribute(String, String)</B></A> - 
337 413
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
338 414
<DD>Add a new attribute to this node, or set its value
415
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setDocID(java.lang.String)"><B>setDocID(String)</B></A> - 
416
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
417
<DD>Set the doc id of this node
339 418
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#setDoctype(oracle.xml.parser.v2.DTD)"><B>setDoctype(DTD)</B></A> - 
340 419
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
341 420
<DD>SAX Handler that receives notification of DTD.
......
354 433
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setParentID(long)"><B>setParentID(long)</B></A> - 
355 434
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
356 435
<DD>Set the parent id of this node
436
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setRootNodeID(long)"><B>setRootNodeID(long)</B></A> - 
437
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
438
<DD>Set the root node id of this node
357 439
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setTagName(java.lang.String)"><B>setTagName(String)</B></A> - 
358 440
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
359 441
<DD>Set the name of this node
442
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#setTitle(java.lang.String)"><B>setTitle(String)</B></A> - 
443
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
444
<DD>Set the document title
445
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#setTitleFromChildElement()"><B>setTitleFromChildElement()</B></A> - 
446
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
447
<DD>Look up the title of the first child element named "title"
448
 and record it as the document title
360 449
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startDocument()"><B>startDocument()</B></A> - 
361 450
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
362 451
<DD>SAX Handler that receives notification of beginning of the document
363 452
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startElement(oracle.xml.parser.v2.NSName, oracle.xml.parser.v2.SAXAttrList)"><B>startElement(NSName, SAXAttrList)</B></A> - 
364 453
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
365 454
<DD>SAX Handler that is called at the start of each XML element
455
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#startElement(java.lang.String, org.xml.sax.AttributeList)"><B>startElement(String, AttributeList)</B></A> - 
456
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
457
<DD>callback method used by the SAX Parser when the start tag of an 
458
 element is detected.
366 459
</DL>
367 460
<HR>
368 461
<A NAME="_T_"><!-- --></A><H2>
369 462
<B>T</B></H2>
370 463
<DL>
371
<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html"><B>TextNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>.<DD>A Class that represents an XML element and its contents,
372
 and can build itself from a database connection<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#TextNode(java.sql.Connection, long, long, java.lang.String, java.lang.String)"><B>TextNode(Connection, long, long, String, String)</B></A> - 
464
<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html"><B>TextNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>.<DD>A Class that represents an XML Text node and its contents,<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#TextNode(long, long, java.lang.String, java.lang.String)"><B>TextNode(long, long, String, String)</B></A> - 
373 465
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>
374 466
<DD>Construct a new TextNode instance
375 467
<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#toString()"><B>toString()</B></A> - 
......
379 471
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>
380 472
<DD>String representation for display purposes (recursively descends through
381 473
 children to create an XML subtree)
474
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#toString()"><B>toString()</B></A> - 
475
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
476
<DD>create a String description of the query that this instance represents.
382 477
<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#transformXMLDocument(java.lang.String, java.lang.String, java.lang.String, java.io.PrintWriter)"><B>transformXMLDocument(String, String, String, PrintWriter)</B></A> - 
383 478
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
384 479
<DD>Transform an XML document using the stylesheet reference from the db
......
413 508
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeChildNodeToDB(java.lang.String, java.lang.String, java.lang.String)"><B>writeChildNodeToDB(String, String, String)</B></A> - 
414 509
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
415 510
<DD>creates SQL code and inserts new node into DB connection
511
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeDocID(java.lang.String)"><B>writeDocID(String)</B></A> - 
512
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
513
<DD>creates SQL code to put doc ID for the document node and for 
514
 comment/PI nodes under document node into DB connection
416 515
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeNodename(java.lang.String)"><B>writeNodename(String)</B></A> - 
417 516
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
418 517
<DD>creates SQL code to put nodename for the document node 
419 518
 into DB connection
519
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeRootNodeID(long)"><B>writeRootNodeID(long)</B></A> - 
520
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
521
<DD>creates SQL code to put root node id for the document node 
522
 into DB connection
420 523
</DL>
421 524
<HR>
422 525
<A NAME="_X_"><!-- --></A><H2>
......
434 537
<DD>&nbsp;
435 538
</DL>
436 539
<HR>
437
<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <A HREF="#_X_">X</A> 
540
<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_Q_">Q</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <A HREF="#_X_">X</A> 
438 541
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