Revision 205
Added by Matt Jones over 24 years ago
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MetaCat API: Index |
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<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_Q_">Q</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <A HREF="#_X_">X</A> <HR>
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<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_Q_">Q</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <HR> |
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<A NAME="_A_"><!-- --></A><H2> |
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<B>A</B></H2> |
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<DL> |
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html"><B>AccessionNumber</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>.<DD>A class that gets Accession Number, check for uniqueness and register it
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into db connection<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html#AccessionNumber()"><B>AccessionNumber()</B></A> -
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html"><B>AccessionNumber</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>.<DD>A class that generates an Accession Number and will check a submitted
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accession number for uniqueness and register it into the db connection<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html#AccessionNumber()"><B>AccessionNumber()</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A> |
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<DD> |
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html"><B>AccessionNumberException</B></A> - exception edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html">AccessionNumberException</A>.<DD>Exception thrown when an error occurs because an AccessionNumber was |
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invalid or used incorrectly.<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html#AccessionNumberException(java.lang.String)"><B>AccessionNumberException(String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html">AccessionNumberException</A> |
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<DD>Create a new AccessionNumberException. |
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html"><B>AccessionNumberGeneratedException</B></A> - exception edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html">AccessionNumberGeneratedException</A>.<DD>Exception thrown when a new accession number is generated |
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either because none was provided or it was not unique.<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html#AccessionNumberGeneratedException(java.lang.String)"><B>AccessionNumberGeneratedException(String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html">AccessionNumberGeneratedException</A> |
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<DD>Create a new AccessionNumberGeneratedException. |
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#addChildNode(edu.ucsb.nceas.metacat.BasicNode)"><B>addChildNode(BasicNode)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A> |
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<DD>Add a child node to this node |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#atFirstElement()"><B>atFirstElement()</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>get the document processing state |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#attributeDecl(java.lang.String, java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>attributeDecl(String, String, String, String, String)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler that receives notification of attribute declarations |
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</DL> |
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<HR> |
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<A NAME="_B_"><!-- --></A><H2> |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A> |
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<DD>callback method used by the SAX Parser when the text sequences of an |
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xml stream are detected. |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#comment(java.lang.String)"><B>comment(String)</B></A> -
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#comment(char[], int, int)"><B>comment(char[], int, int)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler called once for each comment found: |
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node that comment may occur before or after the root element. |
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<DD>SAX Handler that receives notification of comments in the DTD |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#createQuery(java.lang.String)"><B>createQuery(String)</B></A> - |
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A> |
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<DD>format a simple free-text value query as an XML document that conforms |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html"><B>DBEntityResolver</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A>.<DD>A database aware Class implementing EntityResolver interface for the SAX |
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parser to call when processing the XML stream and intercepting any |
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external entities (including the external DTD subset and external |
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parameter entities, if any) before including them.<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html#DBEntityResolver(java.sql.Connection)"><B>DBEntityResolver(Connection)</B></A> -
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parameter entities, if any) before including them.<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html#DBEntityResolver(java.sql.Connection, edu.ucsb.nceas.metacat.DBSAXHandler)"><B>DBEntityResolver(Connection, DBSAXHandler)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A> |
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<DD>Construct an instance of the DBEntityResolver clas |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#dbg(int)"><B>dbg(int)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A> |
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<DD> |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html"><B>DBQuery</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>.<DD>A Class that searches a relational DB for elements and |
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attributes that have free text matches a query string, |
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or structured query matches to a path specified node in the |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#DBReader(java.sql.Connection)"><B>DBReader(Connection)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A> |
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<DD>construct a DBReader instance. |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html"><B>DBSAXDocument</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>.<DD>A Class that writes an XML document main data to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#DBSAXDocument(java.sql.Connection, long, java.lang.String, java.lang.String)"><B>DBSAXDocument(Connection, long, String, String)</B></A> -
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html"><B>DBSAXDocument</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>.<DD>A Class that writes an XML document main data to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#DBSAXDocument(java.sql.Connection)"><B>DBSAXDocument(Connection)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A> |
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<DD>Construct a new document instance, used for deleting documents |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#DBSAXDocument(java.sql.Connection, long, java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>DBSAXDocument(Connection, long, String, String, String, String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A> |
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<DD>Construct a new document instance |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html"><B>DBSAXHandler</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>.<DD>A database aware Class implementing callback bethods for the SAX parser to |
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call when processing the XML stream and generating events<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#DBSAXHandler(java.sql.Connection)"><B>DBSAXHandler(Connection)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>Construct an instance of the handler class |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#DBSAXHandler(java.sql.Connection, java.lang.String, java.lang.String)"><B>DBSAXHandler(Connection, String, String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>Construct an instance of the handler class |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html"><B>DBSAXNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>.<DD>A Class that represents an XML node and its contents and |
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can write its own representation to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#DBSAXNode(java.sql.Connection, java.lang.String)"><B>DBSAXNode(Connection, String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A> |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html"><B>DBTransform</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>.<DD>A Class that transforms XML documents utitlizing XSL style sheets<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#DBTransform(java.sql.Connection)"><B>DBTransform(Connection)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A> |
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<DD>construct a DBTransform instance. |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html"><B>DBValidate</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>.<DD>Name: DBValidate.java |
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Purpose: A Class that validates XML documents |
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This class is designed to be parser independent |
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i.e.<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#DBValidate(java.lang.String)"><B>DBValidate(String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A> |
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<DD>Construct a new validation object |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#DBValidate(java.lang.String, java.lang.String)"><B>DBValidate(String, String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A> |
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<DD>Construct a new validation object |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html"><B>DBWriter</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>.<DD>A Class that reads in an XML text document and |
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write its contents to a database connection using SAX<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#DBWriter(java.io.Reader, java.sql.Connection)"><B>DBWriter(Reader, Connection)</B></A> -
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write its contents to a database connection using SAX<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#DBWriter(java.sql.Connection, java.lang.String)"><B>DBWriter(Connection, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A> |
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<DD>construct a new instance of the class to write an XML file to the database |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#DBWriter(java.lang.String, java.sql.Connection)"><B>DBWriter(String, Connection)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A> |
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<DD> |
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#debugMessage(int)"><B>debugMessage(int)</B></A> - |
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A> |
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<DD>Utility method to print debugging messages |
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#debugMessage(java.lang.String)"><B>debugMessage(String)</B></A> - |
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A> |
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<DD>Utility method to print debugging messages |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#delete(java.lang.String)"><B>delete(String)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A> |
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<DD>Delete an XML file from the database (actually, just make it a revision |
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in the xml_revisions table) |
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#doGet(javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)"><B>doGet(HttpServletRequest, HttpServletResponse)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A> |
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<DD>Handle "GET" method requests from HTTP clients |
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<A NAME="_E_"><!-- --></A><H2> |
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<B>E</B></H2> |
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<DL> |
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<DT><A HREF="edu/ucsb/nceas/metacat/package-summary.html"><B>edu.ucsb.nceas.metacat</B></A> - package edu.ucsb.nceas.metacat<DD> <DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html"><B>ElementNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>.<DD>A Class that represents an XML element and its contents, |
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<DT><A HREF="edu/ucsb/nceas/metacat/package-summary.html"><B>edu.ucsb.nceas.metacat</B></A> - package edu.ucsb.nceas.metacat<DD> <DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#elementDecl(java.lang.String, java.lang.String)"><B>elementDecl(String, String)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler that receives notification of element declarations |
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<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html"><B>ElementNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>.<DD>A Class that represents an XML element and its contents, |
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and can build itself from a database connection<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html#ElementNode(java.sql.Connection)"><B>ElementNode(Connection)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A> |
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<DD>Construct a new ElementNode instance |
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<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html#ElementNode(java.sql.Connection, long, long, java.lang.String, java.lang.String)"><B>ElementNode(Connection, long, long, String, String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A> |
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<DD>Construct a new ElementNode instance |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endDoctype()"><B>endDoctype()</B></A> -
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endCDATA()"><B>endCDATA()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler that receives notification of end of DTD |
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All events in DTDHandler about all unparsed entities and the |
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event in EntityResolver for the DTD file declaration appear |
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between setDoctype and endDoctype. |
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<DD>SAX Handler that receives notification of the end of CDATA sections |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endDocument()"><B>endDocument()</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler that receives notification of end of the document |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endElement(oracle.xml.parser.v2.NSName)"><B>endElement(NSName)</B></A> -
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endDTD()"><B>endDTD()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler that receives notification of end of DTD |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endElement(java.lang.String, java.lang.String, java.lang.String)"><B>endElement(String, String, String)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler that is called at the end of each XML element |
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#endElement(java.lang.String)"><B>endElement(String)</B></A> -
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#endElement(java.lang.String, java.lang.String, java.lang.String)"><B>endElement(String, String, String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A> |
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<DD>callback method used by the SAX Parser when the end tag of an |
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element is detected. |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endEntity(java.lang.String)"><B>endEntity(String)</B></A> - |
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
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<DD>SAX Handler that receives notification of the end of entities |
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#error(org.xml.sax.SAXParseException)"><B>error(SAXParseException)</B></A> - |
|
241 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
242 |
<DD>SAX Handler that receives notification of recoverable parsing errors |
|
243 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#externalEntityDecl(java.lang.String, java.lang.String, java.lang.String)"><B>externalEntityDecl(String, String, String)</B></A> - |
|
244 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
245 |
<DD>SAX Handler that receives notification of external entity declarations |
|
202 | 246 |
</DL> |
203 | 247 |
<HR> |
204 | 248 |
<A NAME="_F_"><!-- --></A><H2> |
205 | 249 |
<B>F</B></H2> |
206 | 250 |
<DL> |
207 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#fileToURL(java.io.File)"><B>fileToURL(File)</B></A> - |
|
208 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A> |
|
251 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#fatalError(org.xml.sax.SAXParseException)"><B>fatalError(SAXParseException)</B></A> - |
|
252 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
253 |
<DD>SAX Handler that receives notification of fatal parsing errors |
|
254 |
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#fileToURL(java.io.File)"><B>fileToURL(File)</B></A> - |
|
255 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A> |
|
209 | 256 |
<DD>Utility method to convert a file handle into a URL |
210 | 257 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#findDocuments(java.io.Reader)"><B>findDocuments(Reader)</B></A> - |
211 | 258 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A> |
... | ... | |
223 | 270 |
<DL> |
224 | 271 |
<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html#generate(java.lang.String, java.lang.String)"><B>generate(String, String)</B></A> - |
225 | 272 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A> |
226 |
<DD>This method gets Accession Number (if any), check for uniqueness |
|
227 |
and register it into new db connection |
|
228 |
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html"><B>GenericXMLValidate</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>.<DD>Name: GenericXMLValidate.java |
|
229 |
Purpose: A Class that validates XML documents |
|
230 |
This class is designed to be 'parser independent |
|
231 |
i.e.<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#GenericXMLValidate(org.xml.sax.Parser)"><B>GenericXMLValidate(Parser)</B></A> - |
|
232 |
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A> |
|
233 |
<DD> |
|
234 |
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#GenericXMLValidate(org.xml.sax.Parser, java.lang.String)"><B>GenericXMLValidate(Parser, String)</B></A> - |
|
235 |
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A> |
|
236 |
<DD> |
|
273 |
<DD>Get an accession number from the user, check it for uniqueness |
|
274 |
and register it into new db connection. |
|
237 | 275 |
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getAttribute(java.lang.String)"><B>getAttribute(String)</B></A> - |
238 | 276 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A> |
239 | 277 |
<DD>Get an attribute value by name |
... | ... | |
249 | 287 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getDocID()"><B>getDocID()</B></A> - |
250 | 288 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A> |
251 | 289 |
<DD>Get doc id |
290 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#getDocname()"><B>getDocname()</B></A> - |
|
291 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
292 |
<DD>get the document name |
|
252 | 293 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDocname()"><B>getDocname()</B></A> - |
253 | 294 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A> |
254 | 295 |
<DD>get the document name |
255 | 296 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDoctype()"><B>getDoctype()</B></A> - |
256 | 297 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A> |
257 | 298 |
<DD>get the document type |
299 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getDoctype()"><B>getDoctype()</B></A> - |
|
300 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A> |
|
301 |
<DD>Get doctype |
|
258 | 302 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getDoctypeInfo(java.lang.String)"><B>getDoctypeInfo(String)</B></A> - |
259 | 303 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A> |
260 | 304 |
<DD>Look up the document type information from the database |
... | ... | |
270 | 314 |
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getNodeType()"><B>getNodeType()</B></A> - |
271 | 315 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A> |
272 | 316 |
<DD>Get the type of this node |
317 |
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#getOption(java.lang.String)"><B>getOption(String)</B></A> - |
|
318 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A> |
|
319 |
<DD>Utility method to get an option value from the properties file |
|
273 | 320 |
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getParentID()"><B>getParentID()</B></A> - |
274 | 321 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A> |
275 | 322 |
<DD>Get the parent id of this node |
... | ... | |
309 | 356 |
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#init(javax.servlet.ServletConfig)"><B>init(ServletConfig)</B></A> - |
310 | 357 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A> |
311 | 358 |
<DD>Initialize the servlet by creating appropriate database connections |
359 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#internalEntityDecl(java.lang.String, java.lang.String)"><B>internalEntityDecl(String, String)</B></A> - |
|
360 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
361 |
<DD>SAX Handler that receives notification of internal entity declarations |
|
312 | 362 |
</DL> |
313 | 363 |
<HR> |
314 | 364 |
<A NAME="_M_"><!-- --></A><H2> |
... | ... | |
320 | 370 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#main(java.lang.String[])"><B>main(String[])</B></A> - |
321 | 371 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A> |
322 | 372 |
<DD>the main routine used to test the DBQuery utility. |
373 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#main(java.lang.String[])"><B>main(String[])</B></A> - |
|
374 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A> |
|
375 |
<DD>main method for testing |
|
376 |
|
|
323 | 377 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#main(java.lang.String[])"><B>main(String[])</B></A> - |
324 | 378 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A> |
325 | 379 |
<DD>the main routine used to test the DBWriter utility. |
326 | 380 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#main(java.lang.String[])"><B>main(String[])</B></A> - |
327 | 381 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A> |
328 | 382 |
<DD>main routine used for testing. |
329 |
<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html#main(java.lang.String[])"><B>main(String[])</B></A> - |
|
330 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A> |
|
331 |
<DD> |
|
332 | 383 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#main(java.lang.String[])"><B>main(String[])</B></A> - |
333 | 384 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A> |
334 | 385 |
<DD>the main routine used to test the DBSimpleQuery utility. |
... | ... | |
342 | 393 |
<DD> |
343 | 394 |
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html"><B>MetaCatUtil</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>.<DD>A suite of utility classes for the metadata catalog server<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#MetaCatUtil()"><B>MetaCatUtil()</B></A> - |
344 | 395 |
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A> |
345 |
<DD>
|
|
396 |
<DD>Construct an instance of the utility class
|
|
346 | 397 |
</DL> |
347 | 398 |
<HR> |
348 | 399 |
<A NAME="_N_"><!-- --></A><H2> |
... | ... | |
356 | 407 |
<A NAME="_O_"><!-- --></A><H2> |
357 | 408 |
<B>O</B></H2> |
358 | 409 |
<DL> |
410 |
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#openDBConnection()"><B>openDBConnection()</B></A> - |
|
411 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A> |
|
412 |
<DD>Utility method to establish a JDBC database connection using connection |
|
413 |
info from the properties file |
|
359 | 414 |
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#openDBConnection(java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>openDBConnection(String, String, String, String)</B></A> - |
360 | 415 |
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A> |
361 | 416 |
<DD>Utility method to establish a JDBC database connection |
... | ... | |
398 | 453 |
except the top-level document entity (including the external DTD subset, |
399 | 454 |
external entities referenced within the DTD, and external entities |
400 | 455 |
referenced within the document element) |
401 |
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#returnErrors()"><B>returnErrors()</B></A> -
|
|
402 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A>
|
|
403 |
<DD>
|
|
456 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#returnErrors()"><B>returnErrors()</B></A> -
|
|
457 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>
|
|
458 |
<DD>provide a list of errors fromthe validation process
|
|
404 | 459 |
</DL> |
405 | 460 |
<HR> |
406 | 461 |
<A NAME="_S_"><!-- --></A><H2> |
407 | 462 |
<B>S</B></H2> |
408 | 463 |
<DL> |
464 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#saveDocument(java.lang.String)"><B>saveDocument(String)</B></A> - |
|
465 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A> |
|
466 |
<DD>Save a document entry in the xml_revisions table |
|
409 | 467 |
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setAttribute(java.lang.String, java.lang.String)"><B>setAttribute(String, String)</B></A> - |
410 | 468 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A> |
411 | 469 |
<DD>Add a new attribute to this node, or set its value |
... | ... | |
415 | 473 |
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setDocID(java.lang.String)"><B>setDocID(String)</B></A> - |
416 | 474 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A> |
417 | 475 |
<DD>Set the doc id of this node |
418 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#setDoctype(oracle.xml.parser.v2.DTD)"><B>setDoctype(DTD)</B></A> - |
|
419 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
420 |
<DD>SAX Handler that receives notification of DTD. |
|
421 | 476 |
<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#setNodeData(java.lang.String)"><B>setNodeData(String)</B></A> - |
422 | 477 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A> |
423 | 478 |
<DD>Set the node data to the given string |
... | ... | |
446 | 501 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A> |
447 | 502 |
<DD>Look up the title of the first child element named "title" |
448 | 503 |
and record it as the document title |
504 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startCDATA()"><B>startCDATA()</B></A> - |
|
505 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
506 |
<DD>SAX Handler that receives notification of the start of CDATA sections |
|
449 | 507 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startDocument()"><B>startDocument()</B></A> - |
450 | 508 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
451 | 509 |
<DD>SAX Handler that receives notification of beginning of the document |
452 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startElement(oracle.xml.parser.v2.NSName, oracle.xml.parser.v2.SAXAttrList)"><B>startElement(NSName, SAXAttrList)</B></A> -
|
|
510 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startDTD(java.lang.String, java.lang.String, java.lang.String)"><B>startDTD(String, String, String)</B></A> -
|
|
453 | 511 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
512 |
<DD>SAX Handler that receives notification of DOCTYPE. |
|
513 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startElement(java.lang.String, java.lang.String, java.lang.String, org.xml.sax.Attributes)"><B>startElement(String, String, String, Attributes)</B></A> - |
|
514 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
454 | 515 |
<DD>SAX Handler that is called at the start of each XML element |
455 |
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#startElement(java.lang.String, org.xml.sax.AttributeList)"><B>startElement(String, AttributeList)</B></A> -
|
|
516 |
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#startElement(java.lang.String, java.lang.String, java.lang.String, org.xml.sax.Attributes)"><B>startElement(String, String, String, Attributes)</B></A> -
|
|
456 | 517 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A> |
457 | 518 |
<DD>callback method used by the SAX Parser when the start tag of an |
458 | 519 |
element is detected. |
520 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startEntity(java.lang.String)"><B>startEntity(String)</B></A> - |
|
521 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
522 |
<DD>SAX Handler that receives notification of the start of entities |
|
459 | 523 |
</DL> |
460 | 524 |
<HR> |
461 | 525 |
<A NAME="_T_"><!-- --></A><H2> |
... | ... | |
491 | 555 |
<A NAME="_V_"><!-- --></A><H2> |
492 | 556 |
<B>V</B></H2> |
493 | 557 |
<DL> |
494 |
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#validate(java.lang.String)"><B>validate(String)</B></A> - |
|
495 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A> |
|
496 |
<DD> |
|
497 |
<DT><A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html#validateString(java.lang.String)"><B>validateString(String)</B></A> - |
|
498 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/GenericXMLValidate.html">GenericXMLValidate</A> |
|
499 |
<DD> |
|
500 |
<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html#validating"><B>validating</B></A> - |
|
501 |
Variable in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A> |
|
502 |
<DD> |
|
558 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#validate(java.lang.String)"><B>validate(String)</B></A> - |
|
559 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A> |
|
560 |
<DD>validate an xml document against its DTD |
|
561 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#validateString(java.lang.String)"><B>validateString(String)</B></A> - |
|
562 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A> |
|
563 |
<DD>validate an xml document against its DTD |
|
503 | 564 |
</DL> |
504 | 565 |
<HR> |
505 | 566 |
<A NAME="_W_"><!-- --></A><H2> |
506 | 567 |
<B>W</B></H2> |
507 | 568 |
<DL> |
569 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#warning(org.xml.sax.SAXParseException)"><B>warning(SAXParseException)</B></A> - |
|
570 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A> |
|
571 |
<DD>SAX Handler that receives notification of warnings |
|
572 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#write(java.io.Reader, java.lang.String, java.lang.String)"><B>write(Reader, String, String)</B></A> - |
|
573 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A> |
|
574 |
<DD>Insert XML stream to the database |
|
575 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#write(java.lang.String, java.lang.String, java.lang.String)"><B>write(String, String, String)</B></A> - |
|
576 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A> |
|
577 |
<DD>Insert an XML file to the database |
|
508 | 578 |
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeChildNodeToDB(java.lang.String, java.lang.String, java.lang.String)"><B>writeChildNodeToDB(String, String, String)</B></A> - |
509 | 579 |
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A> |
510 | 580 |
<DD>creates SQL code and inserts new node into DB connection |
... | ... | |
522 | 592 |
into DB connection |
523 | 593 |
</DL> |
524 | 594 |
<HR> |
525 |
<A NAME="_X_"><!-- --></A><H2> |
|
526 |
<B>X</B></H2> |
|
527 |
<DL> |
|
528 |
<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html"><B>XMLValidate</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A>.<DD>XMLValidate.java |
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Purpose: A Class that validates XML documents |
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This class is uses a specific parser |
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and calls the GenericXMLValidate class |
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to do the actual validation |
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Copyright: 2000 Regents of the University of California and the |
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National Center for Ecological Analysis and Synthesis |
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April 28, 2000<DT><A HREF="edu/ucsb/nceas/metacat/XMLValidate.html#XMLValidate(java.lang.String)"><B>XMLValidate(String)</B></A> - |
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/XMLValidate.html">XMLValidate</A> |
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<DD> |
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</DL> |
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<HR> |
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