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Revision 2286

Added by Jing Tao almost 20 years ago

Add a code to load eml201 parser to fix the bug that couldn't generate access rule for eml201 doc.

View differences:

src/edu/ucsb/nceas/metacat/MetacatReplication.java
40 40
import org.xml.sax.*;
41 41

  
42 42
public class MetacatReplication extends HttpServlet implements Runnable
43
{  
43
{
44 44
  private String deltaT;
45 45
  Timer replicationDaemon;
46 46
  private static MetaCatUtil util = new MetaCatUtil();
47 47
  private Vector fileLocks = new Vector();
48 48
  private Thread lockThread = null;
49 49
  private static final AbstractDatabase dbAdapter = MetaCatUtil.dbAdapter;
50
  
50

  
51 51
  /**
52 52
   * Initialize the servlet by creating appropriate database connections
53 53
   */
54
  public void init(ServletConfig config) throws ServletException 
54
  public void init(ServletConfig config) throws ServletException
55 55
  {
56 56
     //initialize db connections to handle any update requests
57 57
    MetaCatUtil util = new MetaCatUtil();
......
65 65
          public java.net.URLStreamHandler createURLStreamHandler(
66 66
                        final String protocol)
67 67
          {
68
              if ("http".equals(protocol)) 
68
              if ("http".equals(protocol))
69 69
              {
70
                 try 
70
                 try
71 71
                 {
72 72
                    URLStreamHandler urlsh = new HTTPClient.http.Handler();
73 73
                    MetaCatUtil.debugMessage("Using HttpClient Protocol Handler for http", 45);
74 74
                    return urlsh;
75
                  } 
76
                  catch (Exception e) 
75
                  }
76
                  catch (Exception e)
77 77
                  {
78 78
                     MetaCatUtil.debugMessage(
79 79
                          "Error setting URL StreamHandler!", 30);
80 80
                     return null;
81 81
                  }
82 82
               }//if
83
               else if ("https".equals(protocol)) 
83
               else if ("https".equals(protocol))
84 84
               {
85
                 try 
85
                 try
86 86
                 {
87 87
                   URLStreamHandler urlsh = new HTTPClient.https.Handler();
88 88
                   MetaCatUtil.debugMessage("Using HttpClient Protocol Handler for https", 45);
89 89
                   return urlsh;
90
                 } 
91
                 catch (Exception e) 
90
                 }
91
                 catch (Exception e)
92 92
                 {
93 93
                   MetaCatUtil.debugMessage(
94 94
                              "Error setting URL StreamHandler!", 30);
......
98 98
              return null;
99 99
         }//createURLStreamHandler
100 100
     });*/
101
    
101

  
102 102
  }
103
  
104
  public void destroy() 
103

  
104
  public void destroy()
105 105
  {
106 106
    replicationDaemon.cancel();
107 107
   // System.out.println("Replication daemon cancelled.");
108 108
  }
109
  
109

  
110 110
  public void doGet (HttpServletRequest request, HttpServletResponse response)
111
                     throws ServletException, IOException 
111
                     throws ServletException, IOException
112 112
  {
113 113
    // Process the data and send back the response
114 114
    handleGetOrPost(request, response);
115 115
  }
116 116

  
117 117
  public void doPost(HttpServletRequest request, HttpServletResponse response)
118
                     throws ServletException, IOException 
118
                     throws ServletException, IOException
119 119
  {
120 120
    // Process the data and send back the response
121 121
    handleGetOrPost(request, response);
122 122
  }
123
  
124
  private void handleGetOrPost(HttpServletRequest request, 
125
                               HttpServletResponse response) 
126
                               throws ServletException, IOException 
123

  
124
  private void handleGetOrPost(HttpServletRequest request,
125
                               HttpServletResponse response)
126
                               throws ServletException, IOException
127 127
  {
128 128
    //PrintWriter out = response.getWriter();
129 129
    //ServletOutputStream outPut = response.getOutputStream();
130 130
    Hashtable params = new Hashtable();
131 131
    Enumeration paramlist = request.getParameterNames();
132
    
133
   
134
    
132

  
133

  
134

  
135 135
// NOT NEEDED - doesn't provide enough security because of possible IP spoofing
136 136
// REPLACED with running replication comminications over HTTPS
137 137
//    String requestingServerIP = request.getRemoteAddr();
138 138
//    InetAddress iaddr = InetAddress.getByName(requestingServerIP);
139 139
//    String requestingServer = iaddr.getHostName();
140
    
140

  
141 141
    while (paramlist.hasMoreElements()) {
142 142
      String name = (String)paramlist.nextElement();
143 143
      String[] value = request.getParameterValues(name);
144
      params.put(name, value);  
144
      params.put(name, value);
145 145
    }
146
    
146

  
147 147
    String action = ((String[])params.get("action"))[0];
148 148
    String server = null;
149
    
149

  
150 150
    try {
151 151
      // check if the server is included in the list of replicated servers
152
      if ( !action.equals("servercontrol") && 
152
      if ( !action.equals("servercontrol") &&
153 153
           !action.equals("stop") &&
154 154
           !action.equals("start") &&
155 155
           !action.equals("getall") ) {
156 156

  
157 157
        server = ((String[])params.get("server"))[0];
158 158
        if ( getServerCodeForServerName(server) == 0 ) {
159
          System.out.println("Action \"" + action + 
159
          System.out.println("Action \"" + action +
160 160
                             "\" rejected for server: " + server);
161 161
          return;
162 162
        } else {
163
          System.out.println("Action \"" + action + 
163
          System.out.println("Action \"" + action +
164 164
                             "\" accepted for server: " + server);
165 165
        }
166 166
      }
......
169 169
                         e.getMessage() );
170 170
      return;
171 171
    }
172
    if ( action.equals("readdata") ) 
172
    if ( action.equals("readdata") )
173 173
    {
174 174
      OutputStream out=response.getOutputStream();
175 175
      //to get the data file.
176 176
      handleGetDataFileRequest(out, params, response);
177 177
      out.close();
178 178
    }
179
    else if ( action.equals("forcereplicatedatafile") ) 
179
    else if ( action.equals("forcereplicatedatafile") )
180 180
    {
181 181
      //read a specific docid from remote host, and store it into local host
182 182
      handleForceReplicateDataFileRequest(params);
183
     
183

  
184 184
    }
185 185
    else
186 186
    {
......
191 191
      replicationDaemon = new Timer(true);
192 192
      out.println("Replication Handler Stopped");
193 193
      MetacatReplication.replLog("deltaT handler stopped");
194
    
195 194

  
195

  
196 196
    } else if ( action.equals("start") ) {
197
      
197

  
198 198
      //start the replication server
199 199
      int rate;
200 200
      if ( params.containsKey("rate") ) {
......
211 211
      out.println("New rate is: " + rate + " seconds.");
212 212
      replicationDaemon.cancel();
213 213
      replicationDaemon = new Timer(true);
214
      replicationDaemon.scheduleAtFixedRate(new ReplicationHandler(out), 0, 
214
      replicationDaemon.scheduleAtFixedRate(new ReplicationHandler(out), 0,
215 215
                                            rate * 1000);
216 216
      out.println("Replication Handler Started");
217
      MetacatReplication.replLog("deltaT handler started with rate=" + 
217
      MetacatReplication.replLog("deltaT handler started with rate=" +
218 218
                                    rate + " seconds");
219
     
220 219

  
220

  
221 221
    } else if ( action.equals("getall") ) {
222 222
      //updates this server exactly once
223 223
      replicationDaemon.schedule(new ReplicationHandler(out), 0);
......
227 227
    } else if ( action.equals("forcereplicate") ) {
228 228
      //read a specific docid from remote host, and store it into local host
229 229
      handleForceReplicateRequest(out, params, response);
230
   
230

  
231 231
    } else if ( action.equals("update") ) {
232 232
      //request an update list from the server
233 233
      handleUpdateRequest(out, params, response);
......
255 255
      response.setContentType("text/html");
256 256
      out.println("<html><body>Test successfully</body></html>");
257 257
    }
258
    
258

  
259 259
    out.close();
260 260
    }//else
261 261
  }
262
  
263
  /** 
262

  
263
  /**
264 264
   * This method can add, delete and list the servers currently included in
265 265
   * xml_replication.
266 266
   * action           subaction            other needed params
267 267
   * ---------------------------------------------------------
268 268
   * servercontrol    add                  server
269 269
   * servercontrol    delete               server
270
   * servercontrol    list                 
270
   * servercontrol    list
271 271
   */
272 272
  private void handleServerControlRequest(PrintWriter out, Hashtable params,
273 273
                                          HttpServletResponse response)
......
285 285
      dbConn=DBConnectionPool.
286 286
               getDBConnection("MetacatReplication.handleServerControlRequest");
287 287
      serialNumber=dbConn.getCheckOutSerialNumber();
288
      
288

  
289 289
      // add server to server list
290 290
      if ( subaction.equals("add") ) {
291 291
        replicate = ((String[])params.get("replicate"))[0];
292 292
        server = ((String[])params.get("server"))[0];
293
        
293

  
294 294
        //Get data replication value
295 295
        dataReplicate = ((String[])params.get("datareplicate"))[0];
296 296
        //Get hub value
297 297
        hub = ((String[])params.get("hub"))[0];
298
        
298

  
299 299
        /*pstmt = dbConn.prepareStatement("INSERT INTO xml_replication " +
300 300
                  "(server, last_checked, replicate, datareplicate, hub) " +
301 301
                                      "VALUES ('" + server + "', to_date(" +
......
304 304
                                      + hub +"')");*/
305 305
        pstmt = dbConn.prepareStatement("INSERT INTO xml_replication " +
306 306
                  "(server, last_checked, replicate, datareplicate, hub) " +
307
                                      "VALUES ('" + server + "', "+ 
308
                                      dbAdapter.toDate("01/01/1980", "MM/DD/YYYY") 
307
                                      "VALUES ('" + server + "', "+
308
                                      dbAdapter.toDate("01/01/1980", "MM/DD/YYYY")
309 309
                                      + ", '" +
310 310
                                      replicate +"', '" +dataReplicate+"', '"
311 311
                                      + hub +"')");
312
                                  
312

  
313 313
        pstmt.execute();
314 314
        pstmt.close();
315 315
        dbConn.commit();
316
        out.println("Server " + server + " added"); 
316
        out.println("Server " + server + " added");
317 317
        response.setContentType("text/html");
318 318
        out.println("<html><body><table border=\"1\">");
319 319
        out.println("<tr><td><b>server</b></td><td><b>last_checked</b></td><td>");
......
323 323
        pstmt = dbConn.prepareStatement("SELECT * FROM xml_replication");
324 324
        //increase dbconnection usage
325 325
        dbConn.increaseUsageCount(1);
326
        
326

  
327 327
        pstmt.execute();
328 328
        ResultSet rs = pstmt.getResultSet();
329 329
        boolean tablehasrows = rs.next();
......
333 333
          out.println(rs.getString(4) + "</td><td>");
334 334
          out.println(rs.getString(5) + "</td><td>");
335 335
          out.println(rs.getString(6) + "</td></tr>");
336
          
336

  
337 337
          tablehasrows = rs.next();
338 338
        }
339 339
        out.println("</table></body></html>");
340
        
340

  
341 341
        // download certificate with the public key on this server
342 342
        // and import it as a trusted certificate
343 343
        String certURL = ((String[])params.get("certificate"))[0];
344 344
        downloadCertificate(certURL);
345
        
345

  
346 346
      // delete server from server list
347 347
      } else if ( subaction.equals("delete") ) {
348 348
        server = ((String[])params.get("server"))[0];
......
358 358
        out.println("<b>replicate</b></td>");
359 359
        out.println("<td><b>datareplicate</b></td>");
360 360
        out.println("<td><b>hub</b></td></tr>");
361
  
361

  
362 362
        pstmt = dbConn.prepareStatement("SELECT * FROM xml_replication");
363 363
        //increase dbconnection usage
364 364
        dbConn.increaseUsageCount(1);
......
397 397
          tablehasrows = rs.next();
398 398
        }
399 399
        out.println("</table></body></html>");
400
      } 
400
      }
401 401
      else
402 402
      {
403
       
403

  
404 404
        out.println("<error>Unkonwn subaction</error>");
405
       
405

  
406 406
      }
407 407
      pstmt.close();
408 408
      //conn.close();
409 409

  
410 410
    } catch(Exception e) {
411
      System.out.println("Error in " + 
412
                         "MetacatReplication.handleServerControlRequest " + 
411
      System.out.println("Error in " +
412
                         "MetacatReplication.handleServerControlRequest " +
413 413
                         e.getMessage());
414 414
      e.printStackTrace(System.out);
415 415
    }
......
421 421
      }//try
422 422
      catch (SQLException ee)
423 423
      {
424
        MetaCatUtil.debugMessage("Error in " + 
424
        MetaCatUtil.debugMessage("Error in " +
425 425
                "MetacatReplication.handleServerControlRequest to close pstmt "
426 426
                 + ee.getMessage(), 30);
427 427
      }//catch
......
430 430
        DBConnectionPool.returnDBConnection(dbConn, serialNumber);
431 431
      }//finally
432 432
    }//finally
433
      
433

  
434 434
  }
435
  
436
  // download certificate with the public key from certURL and 
437
  // upload it onto this server; it then must be imported as a 
438
  // trusted certificate 
435

  
436
  // download certificate with the public key from certURL and
437
  // upload it onto this server; it then must be imported as a
438
  // trusted certificate
439 439
  private void downloadCertificate (String certURL)
440 440
                throws FileNotFoundException, IOException, MalformedURLException
441 441
  {
442 442
    MetaCatUtil util = new MetaCatUtil();
443 443
    String certPath = util.getOption("certPath"); //the path to be uploaded to
444
    
444

  
445 445
    // get filename from the URL of the certificate
446 446
    String filename = certURL;
447 447
    int slash = Math.max(filename.lastIndexOf('/'), filename.lastIndexOf('\\'));
448 448
    if ( slash > -1 ) {
449 449
      filename = filename.substring(slash + 1);
450 450
    }
451
    
451

  
452 452
    // open file output strem to write the input into it
453 453
    File f = new File(certPath, filename);
454
    synchronized (f) { 
454
    synchronized (f) {
455 455
      try {
456 456
        if ( f.exists() ) {
457 457
          throw new IOException("File already exist: " + f.getCanonicalFile());
......
464 464
        // or checkWrite method is called for f.canWrite()
465 465
        throw se;
466 466
      }
467
      
467

  
468 468
      // create a buffered byte output stream
469 469
      // that uses a default-sized output buffer
470 470
      FileOutputStream fos = new FileOutputStream(f);
......
486 486
      }
487 487
      // the input and the output streams must be closed
488 488
      bis.close();
489
	    out.flush();
490
	    out.close();
491
	    fos.close();
489
            out.flush();
490
            out.close();
491
            fos.close();
492 492
    } // end of synchronized(f)
493 493
  }
494
  
494

  
495 495
  /**
496 496
   * when a forcereplication request comes in, local host sends a read request
497 497
   * to the requesting server (remote server) for the specified docid.
......
507 507
    int serverCode = 1;
508 508
    DBConnection dbConn = null;
509 509
    int serialNumber = -1;
510
   
510

  
511 511
    try {
512 512
      //if the url contains a dbaction then the default action is overridden
513 513
      if(params.containsKey("dbaction")) {
......
524 524
                +util.getLocalReplicationServerName()
525 525
                +"&action=read&docid=" + docid);
526 526
      String xmldoc = MetacatReplication.getURLContent(u);
527
          
527

  
528 528
      // get the document info from server
529
      URL docinfourl = new URL("https://" + server + 
529
      URL docinfourl = new URL("https://" + server +
530 530
                               "?server="+util.getLocalReplicationServerName()
531 531
                               +"&action=getdocumentinfo&docid=" + docid);
532
    
532

  
533 533
      String docInfoStr = MetacatReplication.getURLContent(docinfourl);
534
  
534

  
535 535
      //dih is the parser for the docinfo xml format
536 536
      DocInfoHandler dih = new DocInfoHandler();
537 537
      XMLReader docinfoParser = ReplicationHandler.initParser(dih);
538 538
      docinfoParser.parse(new InputSource(new StringReader(docInfoStr)));
539 539
      Hashtable docinfoHash = dih.getDocInfo();
540
      
540

  
541 541
      // Get user owner of this docid
542 542
      String user = (String)docinfoHash.get("user_owner");
543 543
      // Get home server of this docid
......
548 548
      MetaCatUtil.debugMessage("docType: "+docType, 34);
549 549
      String parserBase = null;
550 550
      // this for eml2 and we need user eml2 parser
551
      if (docType != null && 
551
      if (docType != null &&
552 552
          (docType.trim()).equals(DocumentImpl.EML2_0_0NAMESPACE))
553 553
      {
554
         MetaCatUtil.debugMessage("This is an eml2 document!", 30);
554
         MetaCatUtil.debugMessage("This is an eml200 document!", 30);
555 555
         parserBase = DocumentImpl.EML200;
556 556
      }
557
      else if (docType != null && (docType.trim()).equals(DocumentImpl.EML2_0_1NAMESPACE))
558
      {
559
         MetaCatUtil.debugMessage("This is an eml2.0.1 document!", 30);
560
         parserBase = DocumentImpl.EML200;
561
      }
562
      else if (docType != null && (docType.trim()).equals(DocumentImpl.EML2_1_0NAMESPACE))
563
      {
564
         MetaCatUtil.debugMessage("This is an eml2.1.0 document!", 30);
565
         parserBase = DocumentImpl.EML210;
566
      }
557 567
      MetaCatUtil.debugMessage("The parserBase is: "+parserBase, 30);
558
           
568

  
559 569
      // Get DBConnection from pool
560 570
      dbConn=DBConnectionPool.
561 571
              getDBConnection("MetacatReplication.handleForceReplicateRequest");
562 572
      serialNumber=dbConn.getCheckOutSerialNumber();
563 573
      // write the document to local database
564 574
      DocumentImplWrapper wrapper = new DocumentImplWrapper(parserBase, false);
565
      wrapper.writeReplication(dbConn, new StringReader(xmldoc), null, null, 
575
      wrapper.writeReplication(dbConn, new StringReader(xmldoc), null, null,
566 576
                               dbaction, docid, user, null, homeServer, server);
567
              
577

  
568 578
      MetacatReplication.replLog("document " + docid + " added to DB with " +
569 579
                                 "action " + dbaction);
570 580
    }//try
571
    catch(Exception e) 
581
    catch(Exception e)
572 582
    {
573
      MetacatReplication.replErrorLog("document " + docid + 
583
      MetacatReplication.replErrorLog("document " + docid +
574 584
                                      " failed to added to DB with " +
575 585
                                      "action " + dbaction + " because "+
576 586
                                       e.getMessage());
577 587
      MetaCatUtil.debugMessage("ERROR in MetacatReplication.handleForceReplicate" +
578 588
                         "Request(): " + e.getMessage(), 30);
579
      
589

  
580 590
    }//catch
581 591
    finally
582 592
    {
......
584 594
      DBConnectionPool.returnDBConnection(dbConn, serialNumber);
585 595
    }//finally
586 596
  }
587
  
597

  
588 598
  /**
589
   * when a forcereplication data file request comes in, local host sends a 
590
   * readdata request to the requesting server (remote server) for the specified 
599
   * when a forcereplication data file request comes in, local host sends a
600
   * readdata request to the requesting server (remote server) for the specified
591 601
   * docid. Then store it in local database and file system
592 602
   */
593 603
  private void handleForceReplicateDataFileRequest(Hashtable params)
594 604
  {
595
    
605

  
596 606
    //make sure there is some parameters
597 607
    if(params.isEmpty())
598 608
    {
599 609
      return;
600 610
    }
601
    // Get remote server 
602
    String server = ((String[])params.get("server"))[0]; 
611
    // Get remote server
612
    String server = ((String[])params.get("server"))[0];
603 613
    // the docid should include rev number
604
    String docid = ((String[])params.get("docid"))[0]; 
614
    String docid = ((String[])params.get("docid"))[0];
605 615
    // Make sure there is a docid and server
606 616
    if (docid==null || server==null || server.equals(""))
607 617
    {
......
609 619
                              , 20);
610 620
      return;
611 621
    }
612
    
622

  
613 623
    // Overide or not
614 624
    boolean override = false;
615 625
    // dbaction - update or insert
616 626
    String dbaction=null;
617
   
618
    try 
627

  
628
    try
619 629
    {
620 630
      //docid was switch to two parts uinque code and rev
621 631
      String uniqueCode=MetaCatUtil.getDocIdFromString(docid);
622 632
      int rev=MetaCatUtil.getVersionFromString(docid);
623
      if(params.containsKey("dbaction")) 
633
      if(params.containsKey("dbaction"))
624 634
      {
625 635
        dbaction = ((String[])params.get("dbaction"))[0];
626 636
      }
......
628 638
      {
629 639
        dbaction = "update";
630 640
      }
631
      
632
      MetacatReplication.replLog("force replication request from " + server); 
641

  
642
      MetacatReplication.replLog("force replication request from " + server);
633 643
      MetaCatUtil.debugMessage("Force replication request from: "+ server, 34);
634 644
      MetaCatUtil.debugMessage("Force replication docid: "+docid, 34);
635 645
      MetaCatUtil.debugMessage("Force replication action: "+dbaction, 34);
636 646
      // get the document info from server
637
      URL docinfourl = new URL("https://" + server + 
647
      URL docinfourl = new URL("https://" + server +
638 648
                               "?server="+util.getLocalReplicationServerName()
639 649
                               +"&action=getdocumentinfo&docid=" + uniqueCode);
640
     
650

  
641 651
      String docInfoStr = MetacatReplication.getURLContent(docinfourl);
642 652

  
643 653
      //dih is the parser for the docinfo xml format
......
646 656
      docinfoParser.parse(new InputSource(new StringReader(docInfoStr)));
647 657
      Hashtable docinfoHash = dih.getDocInfo();
648 658
      String user = (String)docinfoHash.get("user_owner");
649
     
659

  
650 660
      String docName = (String)docinfoHash.get("docname");
651
     
661

  
652 662
      String docType = (String)docinfoHash.get("doctype");
653
      
663

  
654 664
      String docHomeServer= (String)docinfoHash.get("home_server");
655 665
      MetaCatUtil.debugMessage("docHomeServer of datafile: "+docHomeServer, 34);
656
      
657
      
658
      
666

  
667

  
668

  
659 669
      //if action is delete, we don't delete the data file. Just archieve
660 670
      //the xml_documents
661 671
      if (dbaction.equals("delete"))
......
675 685
        String datafilePath = util.getOption("datafilepath");
676 686
        //register data file into xml_documents table and wite data file
677 687
        //into file system
678
        DocumentImpl.writeDataFileInReplication(url.openStream(), datafilePath, 
688
        DocumentImpl.writeDataFileInReplication(url.openStream(), datafilePath,
679 689
                            docName, docType, docid, user,docHomeServer,server);
680 690
     }
681
    
682
  
683
    
691

  
692

  
693

  
684 694
    MetacatReplication.replLog("datafile " + docid + " added to DB with " +
685 695
                                 "action " + dbaction);
686
    } 
687
    catch(Exception e) 
696
    }
697
    catch(Exception e)
688 698
    {
689
      
690
      MetacatReplication.replErrorLog("Datafile " + docid + 
699

  
700
      MetacatReplication.replErrorLog("Datafile " + docid +
691 701
                                      " failed to added to DB with " +
692 702
                                      "action " + dbaction + " because "+
693 703
                                       e.getMessage());
......
701 711
   * The servlet parameters of interrest are:
702 712
   * docid: the docid of the file the lock is being requested for
703 713
   * currentdate: the timestamp of the document on the remote server
704
   * 
714
   *
705 715
   */
706 716
  private void handleGetLockRequest(PrintWriter out, Hashtable params,
707 717
                                    HttpServletResponse response)
......
709 719

  
710 720
    try
711 721
    {
712
    
722

  
713 723
      String docid = ((String[])params.get("docid"))[0];
714 724
      String remoteRev = ((String[])params.get("updaterev"))[0];
715 725
      DocumentImpl requestDoc = new DocumentImpl(docid);
716 726
      MetacatReplication.replLog("lock request for " + docid);
717 727
      int localRevInt = requestDoc.getRev();
718 728
      int remoteRevInt = Integer.parseInt(remoteRev);
719
      
729

  
720 730
      if(remoteRevInt >= localRevInt)
721 731
      {
722 732
        if(!fileLocks.contains(docid))
......
732 742
        else
733 743
        { //deny the lock
734 744
          out.println("<filelocked><docid>" + docid + "</docid></filelocked>");
735
          MetacatReplication.replLog("lock denied for " + docid + 
745
          MetacatReplication.replLog("lock denied for " + docid +
736 746
                                     "reason: file already locked");
737 747
        }
738 748
      }
739 749
      else
740 750
      {//deny the lock.
741 751
        out.println("<outdatedfile><docid>" + docid + "</docid></filelocked>");
742
        MetacatReplication.replLog("lock denied for " + docid + 
752
        MetacatReplication.replLog("lock denied for " + docid +
743 753
                                   "reason: client has outdated file");
744 754
      }
745 755
      //conn.close();
......
751 761
      e.printStackTrace(System.out);
752 762
    }
753 763
  }
754
  
764

  
755 765
  /**
756 766
   * Sends all of the xml_documents information encoded in xml to a requestor
757 767
   * the format is:
......
759 769
   *                  user_updated, home_server, public_access, rev)/>
760 770
   * all of the subelements of document info are #PCDATA
761 771
   */
762
  private void handleGetDocumentInfoRequest(PrintWriter out, Hashtable params, 
772
  private void handleGetDocumentInfoRequest(PrintWriter out, Hashtable params,
763 773
                                        HttpServletResponse response)
764 774
  {
765 775
    String docid = ((String[])(params.get("docid")))[0];
766 776
    StringBuffer sb = new StringBuffer();
767
  
777

  
768 778
    try
769 779
    {
770
      
780

  
771 781
      DocumentImpl doc = new DocumentImpl(docid);
772 782
      sb.append("<documentinfo><docid>").append(docid);
773 783
      sb.append("</docid><docname>").append(doc.getDocname());
......
784 794
      sb.append("</rev></documentinfo>");
785 795
      response.setContentType("text/xml");
786 796
      out.println(sb.toString());
787
      
797

  
788 798
    }
789 799
    catch (Exception e)
790 800
    {
791 801
      System.out.println("error in " +
792
                         "metacatReplication.handlegetdocumentinforequest: " + 
802
                         "metacatReplication.handlegetdocumentinforequest: " +
793 803
                          e.getMessage());
794 804
    }
795
    
805

  
796 806
  }
797
   
807

  
798 808
  /**
799 809
   * Sends a datafile to a remote host
800 810
   */
801
  private void handleGetDataFileRequest(OutputStream outPut, 
811
  private void handleGetDataFileRequest(OutputStream outPut,
802 812
                            Hashtable params, HttpServletResponse response)
803
                                 
813

  
804 814
  {
805
    // File path for data file    
815
    // File path for data file
806 816
    String filepath = util.getOption("datafilepath");
807 817
    // Request docid
808 818
    String docId = ((String[])(params.get("docid")))[0];
......
812 822
      util.debugMessage("Didn't specify docid for replication", 20);
813 823
      return;
814 824
    }
815
    
825

  
816 826
    //try to open a https stream to test if the request server's public key
817 827
    //in the key store, this is security issue
818 828
    try
......
835 845
    {
836 846
      return;
837 847
    }//catch
838
  
839
    if(!filepath.endsWith("/")) 
848

  
849
    if(!filepath.endsWith("/"))
840 850
    {
841 851
          filepath += "/";
842 852
    }
843 853
    // Get file aboslute file name
844
    String filename = filepath + docId;      
845
    
854
    String filename = filepath + docId;
855

  
846 856
    //MIME type
847 857
    String contentType = null;
848
    if (filename.endsWith(".xml")) 
858
    if (filename.endsWith(".xml"))
849 859
    {
850 860
        contentType="text/xml";
851
    } 
852
    else if (filename.endsWith(".css")) 
861
    }
862
    else if (filename.endsWith(".css"))
853 863
    {
854 864
        contentType="text/css";
855
    } 
856
    else if (filename.endsWith(".dtd")) 
865
    }
866
    else if (filename.endsWith(".dtd"))
857 867
    {
858 868
        contentType="text/plain";
859
    } 
860
    else if (filename.endsWith(".xsd")) 
869
    }
870
    else if (filename.endsWith(".xsd"))
861 871
    {
862 872
        contentType="text/xml";
863
    } 
864
    else if (filename.endsWith("/")) 
873
    }
874
    else if (filename.endsWith("/"))
865 875
    {
866 876
        contentType="text/html";
867
    } 
868
    else 
877
    }
878
    else
869 879
    {
870 880
        File f = new File(filename);
871
        if ( f.isDirectory() ) 
881
        if ( f.isDirectory() )
872 882
        {
873 883
           contentType="text/html";
874
        } 
884
        }
875 885
        else
876 886
        {
877 887
           contentType="application/octet-stream";
878 888
        }
879 889
     }
880
   
890

  
881 891
   // Set the mime type
882 892
   response.setContentType(contentType);
883
   
893

  
884 894
   // Get the content of the file
885 895
   FileInputStream fin = null;
886
   try 
896
   try
887 897
   {
888 898
      // FileInputStream to metacat
889 899
      fin = new FileInputStream(filename);
......
892 902
      // Read data from file input stream to byte array
893 903
      int b = fin.read(buf);
894 904
      // Write to outStream from byte array
895
      while (b != -1) 
905
      while (b != -1)
896 906
      {
897 907
        outPut.write(buf, 0, b);
898 908
        b = fin.read(buf);
899 909
      }
900 910
      // close file input stream
901 911
      fin.close();
902
   
912

  
903 913
   }//try
904 914
   catch(Exception e)
905 915
   {
......
907 917
                         "handlGetDataFileRequest " + e.getMessage());
908 918
      e.printStackTrace(System.out);
909 919
   }//catch
910
  
920

  
911 921
}
912
  
913
  
922

  
923

  
914 924
  /**
915 925
   * Sends a document to a remote host
916 926
   */
917
  private void handleGetDocumentRequest(PrintWriter out, Hashtable params, 
927
  private void handleGetDocumentRequest(PrintWriter out, Hashtable params,
918 928
                                        HttpServletResponse response)
919 929
  {
920
  
930

  
921 931
    try
922 932
    {
923 933
      //try to open a https stream to test if the request server's public key
......
935 945
        out.close();
936 946
        return;
937 947
      }
938
      
948

  
939 949
      String docid = ((String[])(params.get("docid")))[0];
940
      
950

  
941 951
      DocumentImpl di = new DocumentImpl(docid);
942 952
      response.setContentType("text/xml");
943 953
      out.print(di.toString(null, null, true));
944
   
954

  
945 955
      MetacatReplication.replLog("document " + docid + " sent");
946
    
956

  
947 957
    }
948 958
    catch(Exception e)
949 959
    {
......
953 963
      response.setContentType("text/xml");
954 964
      out.println("<error>"+e.getMessage()+"</error>");
955 965
    }
956
    
966

  
957 967
  }
958
  
968

  
959 969
  /**
960 970
   * Sends a list of all of the documents on this sever along with their
961
   * revision numbers.  
971
   * revision numbers.
962 972
   * The format is:
963 973
   * <!ELEMENT replication (server, updates)>
964 974
   * <!ELEMENT server (#PCDATA)>
......
971 981
   * note that the rev in deletedDocument is always empty.  I just left
972 982
   * it in there to make the parser implementation easier.
973 983
   */
974
  private void handleUpdateRequest(PrintWriter out, Hashtable params, 
984
  private void handleUpdateRequest(PrintWriter out, Hashtable params,
975 985
                                    HttpServletResponse response)
976 986
  {
977
    // Checked out DBConnection 
987
    // Checked out DBConnection
978 988
    DBConnection dbConn = null;
979 989
    // DBConenction serial number when checked it out
980 990
    int serialNumber = -1;
981 991
    PreparedStatement pstmt = null;
982 992
    // Server list to store server info of xml_replication table
983 993
    ReplicationServerList serverList = null;
984
  
994

  
985 995
    try
986 996
    {
987 997
      // Check out a DBConnection from pool
......
990 1000
      serialNumber=dbConn.getCheckOutSerialNumber();
991 1001
      // Create a server list from xml_replication table
992 1002
      serverList = new ReplicationServerList();
993
      
1003

  
994 1004
      // Get remote server name from param
995 1005
      String server = ((String[])params.get("server"))[0];
996 1006
      // If no servr name in param, return a error
......
1001 1011
        out.close();
1002 1012
        return;
1003 1013
      }//if
1004
      
1014

  
1005 1015
      //try to open a https stream to test if the request server's public key
1006 1016
      //in the key store, this is security issue
1007 1017
      URL u = new URL("https://" + server + "?server="
......
1016 1026
        out.close();
1017 1027
        return;
1018 1028
      }
1019
      
1020
      
1029

  
1030

  
1021 1031
      // Check if local host configure to replicate xml documents to remote
1022 1032
      // server. If not send back a error message
1023 1033
      if (!serverList.getReplicationValue(server))
......
1028 1038
        out.close();
1029 1039
        return;
1030 1040
      }//if
1031
      
1041

  
1032 1042
      // Store the sql command
1033 1043
      StringBuffer docsql = new StringBuffer();
1034 1044
      // Stroe the docid list
......
1037 1047
      StringBuffer delsql = new StringBuffer();
1038 1048
      // Store the data set file
1039 1049
      Vector packageFiles = new Vector();
1040
      
1050

  
1041 1051
      // Append local server's name and replication servlet to doclist
1042 1052
      doclist.append("<?xml version=\"1.0\"?><replication>");
1043 1053
      doclist.append("<server>").append(util.getOption("server"));
1044 1054
      doclist.append(util.getOption("replicationpath"));
1045 1055
      doclist.append("</server><updates>");
1046
      
1056

  
1047 1057
      // Get correct docid that reside on this server according the requesting
1048 1058
      // server's replicate and data replicate value in xml_replication table
1049 1059
      docsql.append("select docid, rev, doctype from xml_documents ");
......
1054 1064
        docsql.append("where server_location = 1");
1055 1065
      }
1056 1066
      MetaCatUtil.debugMessage("Doc sql: "+docsql.toString(), 30);
1057
      
1067

  
1058 1068
      // Get any deleted documents
1059 1069
      delsql.append("select distinct docid from ");
1060 1070
      delsql.append("xml_revisions where docid not in (select docid from ");
......
1066 1076
        delsql.append("and server_location = 1");
1067 1077
      }
1068 1078
      MetaCatUtil.debugMessage("Deleted sql: "+delsql.toString(), 30);
1069
      
1070
      
1071
      
1079

  
1080

  
1081

  
1072 1082
      // Get docid list of local host
1073 1083
      pstmt = dbConn.prepareStatement(docsql.toString());
1074 1084
      pstmt.execute();
......
1087 1097
          //because if a package file is read before all of the files it
1088 1098
          //refers to are loaded then there is an error
1089 1099
          if(recordDoctype != null && !packagedoctypes.contains(recordDoctype))
1090
          {   
1100
          {
1091 1101
              //If this is not data file
1092 1102
              if (!recordDoctype.equals("BIN"))
1093 1103
              {
......
1110 1120
                doclist.append(MetaCatUtil.getOption("datafileflag"));
1111 1121
                doclist.append("</datafile>");
1112 1122
                doclist.append("</updatedDocument>");
1113
              }//else 
1123
              }//else
1114 1124
          }//if packagedoctpes
1115 1125
          else
1116 1126
          { //the package files are saved to be put into the xml later.
......
1127 1137
        while(tablehasrows)
1128 1138
        {
1129 1139
          String recordDoctype = rs.getString(3);
1130
          if(!recordDoctype.equals("BIN")) 
1140
          if(!recordDoctype.equals("BIN"))
1131 1141
          { //don't replicate data files
1132 1142
            Vector packagedoctypes = MetaCatUtil.getOptionList(
1133 1143
                                     MetaCatUtil.getOption("packagedoctype"));
......
1152 1162
         tablehasrows = rs.next();
1153 1163
        }//while
1154 1164
      }//else
1155
      
1165

  
1156 1166
      pstmt = dbConn.prepareStatement(delsql.toString());
1157 1167
      //usage count should increas 1
1158 1168
      dbConn.increaseUsageCount(1);
1159
      
1169

  
1160 1170
      pstmt.execute();
1161 1171
      rs = pstmt.getResultSet();
1162 1172
      tablehasrows = rs.next();
......
1167 1177
        //note that rev is always empty for deleted docs
1168 1178
        tablehasrows = rs.next();
1169 1179
      }
1170
      
1180

  
1171 1181
      //now we can put the package files into the xml results
1172 1182
      for(int i=0; i<packageFiles.size(); i++)
1173 1183
      {
......
1179 1189
        doclist.append("</rev>");
1180 1190
        doclist.append("</updatedDocument>");
1181 1191
      }
1182
      
1192

  
1183 1193
      doclist.append("</updates></replication>");
1184 1194
      MetaCatUtil.debugMessage("doclist: " + doclist.toString(), 40);
1185 1195
      pstmt.close();
1186 1196
      //conn.close();
1187 1197
      response.setContentType("text/xml");
1188 1198
      out.println(doclist.toString());
1189
     
1199

  
1190 1200
    }
1191 1201
    catch(Exception e)
1192 1202
    {
......
1212 1222
        DBConnectionPool.returnDBConnection(dbConn, serialNumber);
1213 1223
      }//finally
1214 1224
    }//finally
1215
 
1225

  
1216 1226
  }//handlUpdateRequest
1217
  
1227

  
1218 1228
  /**
1219 1229
   * Returns the xml_catalog table encoded in xml
1220 1230
   */
......
1222 1232
  {
1223 1233
    return handleGetCatalogRequest(null, null, null, false);
1224 1234
  }
1225
  
1235

  
1226 1236
  /**
1227 1237
   * Sends the contents of the xml_catalog table encoded in xml
1228 1238
   * The xml format is:
......
1230 1240
   * <!ELEMENT row (entry_type, source_doctype, target_doctype, public_id,
1231 1241
   *                system_id)>
1232 1242
   * All of the sub elements of row are #PCDATA
1233
   
1243

  
1234 1244
   * If printFlag == false then do not print to out.
1235 1245
   */
1236
  private static String handleGetCatalogRequest(PrintWriter out, 
1246
  private static String handleGetCatalogRequest(PrintWriter out,
1237 1247
                                                Hashtable params,
1238 1248
                                                HttpServletResponse response,
1239 1249
                                                boolean printFlag)
......
1242 1252
    int serialNumber = -1;
1243 1253
    PreparedStatement pstmt = null;
1244 1254
    try
1245
    { 
1255
    {
1246 1256
      /*conn = MetacatReplication.getDBConnection("MetacatReplication." +
1247 1257
                                                "handleGetCatalogRequest");*/
1248 1258
      dbConn=DBConnectionPool.
......
1264 1274
        sb.append("</target_doctype><public_id>").append(rs.getString(4));
1265 1275
        sb.append("</public_id><system_id>").append(rs.getString(5));
1266 1276
        sb.append("</system_id></row>");
1267
      
1277

  
1268 1278
        tablehasrows = rs.next();
1269 1279
      }
1270 1280
      sb.append("</xml_catalog>");
......
1279 1289
    }
1280 1290
    catch(Exception e)
1281 1291
    {
1282
      
1283
      System.out.println("error in MetacatReplication.handleGetCatalogRequest:"+ 
1292

  
1293
      System.out.println("error in MetacatReplication.handleGetCatalogRequest:"+
1284 1294
                          e.getMessage());
1285 1295
      e.printStackTrace(System.out);
1286 1296
      if(printFlag)
......
1305 1315
        DBConnectionPool.returnDBConnection(dbConn, serialNumber);
1306 1316
      }//finally
1307 1317
    }//finally
1308
      
1318

  
1309 1319
    return null;
1310 1320
  }
1311
  
1321

  
1312 1322
  /**
1313 1323
   * Sends the current system date to the remote server.  Using this action
1314
   * for replication gets rid of any problems with syncronizing clocks 
1324
   * for replication gets rid of any problems with syncronizing clocks
1315 1325
   * because a time specific to a document is always kept on its home server.
1316 1326
   */
1317
  private void handleGetTimeRequest(PrintWriter out, Hashtable params, 
1327
  private void handleGetTimeRequest(PrintWriter out, Hashtable params,
1318 1328
                                    HttpServletResponse response)
1319 1329
  {
1320 1330
    SimpleDateFormat formatter = new SimpleDateFormat ("MM/dd/yy HH:mm:ss");
1321 1331
    java.util.Date localtime = new java.util.Date();
1322 1332
    String dateString = formatter.format(localtime);
1323 1333
    response.setContentType("text/xml");
1324
    
1334

  
1325 1335
    out.println("<timestamp>" + dateString + "</timestamp>");
1326 1336
  }
1327
  
1337

  
1328 1338
  /**
1329
   * this method handles the timeout for a file lock.  when a lock is 
1339
   * this method handles the timeout for a file lock.  when a lock is
1330 1340
   * granted it is granted for 30 seconds.  When this thread runs out
1331 1341
   * it deletes the docid from the queue, thus eliminating the lock.
1332 1342
   */
......
1334 1344
  {
1335 1345
    try
1336 1346
    {
1337
      MetaCatUtil.debugMessage("thread started for docid: " + 
1347
      MetaCatUtil.debugMessage("thread started for docid: " +
1338 1348
                               (String)fileLocks.elementAt(0), 45);
1339
      
1349

  
1340 1350
      Thread.sleep(30000); //the lock will expire in 30 seconds
1341
      MetaCatUtil.debugMessage("thread for docid: " + 
1342
                             (String)fileLocks.elementAt(fileLocks.size() - 1) + 
1351
      MetaCatUtil.debugMessage("thread for docid: " +
1352
                             (String)fileLocks.elementAt(fileLocks.size() - 1) +
1343 1353
                              " exiting.", 45);
1344
      
1354

  
1345 1355
      fileLocks.remove(fileLocks.size() - 1);
1346 1356
      //fileLocks is treated as a FIFO queue.  If there are more than one lock
1347 1357
      //in the vector, the first one inserted will be removed.
1348 1358
    }
1349 1359
    catch(Exception e)
1350 1360
    {
1351
      MetaCatUtil.debugMessage("error in file lock thread from " + 
1361
      MetaCatUtil.debugMessage("error in file lock thread from " +
1352 1362
                                "MetacatReplication.run: " + e.getMessage(), 30);
1353 1363
    }
1354 1364
  }
1355
  
1365

  
1356 1366
  /**
1357 1367
   * Returns the name of a server given a serverCode
1358 1368
   * @param serverCode the serverid of the server
......
1371 1381
                  getDBConnection("MetacatReplication.getServer");
1372 1382
      serialNumber=dbConn.getCheckOutSerialNumber();
1373 1383
      String sql = new String("select server from " +
1374
                              "xml_replication where serverid = " + 
1384
                              "xml_replication where serverid = " +
1375 1385
                              serverCode);
1376 1386
      pstmt = dbConn.prepareStatement(sql);
1377 1387
      //System.out.println("getserver sql: " + sql);
......
1383 1393
        //System.out.println("server: " + rs.getString(1));
1384 1394
        return rs.getString(1);
1385 1395
      }
1386
      
1396

  
1387 1397
      //conn.close();
1388 1398
    }
1389 1399
    catch(Exception e)
1390 1400
    {
1391
      System.out.println("Error in MetacatReplication.getServer: " + 
1401
      System.out.println("Error in MetacatReplication.getServer: " +
1392 1402
                          e.getMessage());
1393 1403
    }
1394 1404
    finally
......
1407 1417
        DBConnectionPool.returnDBConnection(dbConn, serialNumber);
1408 1418
      }//fianlly
1409 1419
    }//finally
1410
        
1411
      
1412
        
1420

  
1421

  
1422

  
1413 1423
    return null;
1414 1424
      //return null if the server does not exist
1415 1425
  }
1416
  
1426

  
1417 1427
  /**
1418 1428
   * Returns a server code given a server name
1419 1429
   * @param server the name of the server
......
1438 1448
      pstmt.execute();
1439 1449
      ResultSet rs = pstmt.getResultSet();
1440 1450
      boolean tablehasrows = rs.next();
1441
      if ( tablehasrows ) {  
1451
      if ( tablehasrows ) {
1442 1452
        serverCode = rs.getInt(1);
1443 1453
        pstmt.close();
1444 1454
        //conn.close();
1445 1455
        return serverCode;
1446 1456
      }
1447
      
1457

  
1448 1458
    } catch(Exception e) {
1449 1459
      throw e;
1450 1460

  
1451 1461
    } finally {
1452
      try 
1462
      try
1453 1463
      {
1454 1464
        pstmt.close();
1455 1465
        //conn.close();
1456 1466
       }//try
1457
       catch(Exception ee) 
1467
       catch(Exception ee)
1458 1468
       {
1459 1469
         MetaCatUtil.debugMessage("Error in MetacatReplicatio.getServerCode: "
1460 1470
                                  +ee.getMessage(), 30);
1461
                           
1471

  
1462 1472
       }//catch
1463 1473
       finally
1464 1474
       {
1465 1475
         DBConnectionPool.returnDBConnection(dbConn, serialNumber);
1466 1476
       }//finally
1467 1477
    }//finally
1468
    
1478

  
1469 1479
    return serverCode;
1470 1480
  }
1471
  
1481

  
1472 1482
  /**
1473 1483
   * Method to get a host server information for given docid
1474 1484
   * @param conn a connection to the database
......
1516 1526
      boolean tableHasRows = rs.next();
1517 1527
      if (tableHasRows)
1518 1528
      {
1519
        
1529

  
1520 1530
          String server = rs.getString(1);
1521 1531
          String last_checked = rs.getString(2);
1522 1532
          if(!server.equals("localhost"))
1523 1533
          {
1524 1534
            sl.put(server, last_checked);
1525 1535
          }
1526
        
1536

  
1527 1537
      }
1528 1538
      else
1529 1539
      {
......
1554 1564
      {
1555 1565
        DBConnectionPool.returnDBConnection(dbConn, serialNumber);
1556 1566
      }
1557
    
1567

  
1558 1568
    }//finally
1559 1569
    return sl;
1560 1570
  }
1561
  
1571

  
1562 1572
  /**
1563 1573
   * Returns a home server location  given a accnum
1564 1574
   * @param accNum , given accNum for a document
1565
   * 
1575
   *
1566 1576
   */
1567 1577
  public static int getHomeServerCodeForDocId(String accNum) throws Exception
1568 1578
  {
......
1573 1583
    //MetaCatUtil ut = new MetaCatUtil();
1574 1584
    String docId=MetaCatUtil.getDocIdFromString(accNum);
1575 1585

  
1576
    try 
1586
    try
1577 1587
    {
1578 1588

  
1579 1589
      // Get DBConnection
1580 1590
      dbConn=DBConnectionPool.
1581 1591
                  getDBConnection("ReplicationHandler.getServerLocation");
1582 1592
      serialNumber=dbConn.getCheckOutSerialNumber();
1583
      pstmt=dbConn.prepareStatement("SELECT server_location FROM xml_documents " 
1593
      pstmt=dbConn.prepareStatement("SELECT server_location FROM xml_documents "
1584 1594
                              + "WHERE docid LIKE '" + docId + "'");
1585 1595
      pstmt.execute();
1586 1596
      ResultSet rs = pstmt.getResultSet();
1587 1597
      boolean tablehasrows = rs.next();
1588 1598
      //If a document is find, return the server location for it
1589
      if ( tablehasrows ) 
1590
      {  
1599
      if ( tablehasrows )
1600
      {
1591 1601
        serverCode = rs.getInt(1);
1592 1602
        pstmt.close();
1593 1603
        //conn.close();
......
1601 1611
        //conn.close();
1602 1612
        return serverCode;
1603 1613
      }
1604
      
1605
    } 
1606
    catch(Exception e) 
1614

  
1615
    }
1616
    catch(Exception e)
1607 1617
    {
1608
      
1618

  
1609 1619
      throw e;
1610 1620

  
1611
    } 
1612
    finally 
1621
    }
1622
    finally
1613 1623
    {
1614
      try 
1624
      try
1615 1625
      {
1616 1626
        pstmt.close();
1617 1627
        //conn.close();
1618
        
1619
      } 
1620
      catch(Exception ee) 
1628

  
1629
      }
1630
      catch(Exception ee)
1621 1631
      {
1622 1632
        MetaCatUtil.debugMessage("Erorr in Replication.getServerLocation "+
1623 1633
                     "to close pstmt"+ee.getMessage(), 30);
......
1629 1639
    }//finally
1630 1640
   //return serverCode;
1631 1641
  }
1632
  
1633
  
1634
  
1642

  
1643

  
1644

  
1635 1645
  /**
1636 1646
   * This method returns the content of a url
1637 1647
   * @param u the url to return the content from
......
1654 1664
    }
1655 1665
    istream.close();
1656 1666
    input.close();
1657
   
1667

  
1658 1668
    return serverResponse.toString();
1659 1669
  }
1660
  
1670

  
1661 1671
  /**
1662
   * Method for writing replication messages to a log file specified in 
1672
   * Method for writing replication messages to a log file specified in
1663 1673
   * metacat.properties
1664 1674
   */
1665 1675
  public static void replLog(String message)
......
1684 1694
      //e.printStackTrace(System.out);
1685 1695
    }
1686 1696
  }
1687
  
1697

  
1688 1698
  /**
1689
   * Method for writing replication messages to a log file specified in 
1699
   * Method for writing replication messages to a log file specified in
1690 1700
   * metacat.properties
1691 1701
   */
1692 1702
  public static void replErrorLog(String message)
......
1711 1721
      //e.printStackTrace(System.out);
1712 1722
    }
1713 1723
  }
1714
  
1724

  
1715 1725
  /**
1716 1726
   * Returns true if the replicate field for server in xml_replication is 1.
1717 1727
   * Returns false otherwise
......
1726 1736
      dbConn=DBConnectionPool.
1727 1737
                  getDBConnection("MetacatReplication.repltoServer");
1728 1738
      serialNumber=dbConn.getCheckOutSerialNumber();
1729
      pstmt = dbConn.prepareStatement("select replicate from " + 
1739
      pstmt = dbConn.prepareStatement("select replicate from " +
1730 1740
                                    "xml_replication where server like '" +
1731 1741
                                     server + "'");
1732 1742
      pstmt.execute();
......
1751 1761
    }
1752 1762
    catch(Exception e)
1753 1763
    {
1754
      System.out.println("error in MetacatReplication.replToServer: " + 
1764
      System.out.println("error in MetacatReplication.replToServer: " +
1755 1765
                         e.getMessage());
1756 1766
    }
1757 1767
    finally
......
1774 1784
    return false;
1775 1785
    //the default if this server does not exist is to not replicate to it.
1776 1786
  }
1777
  
1778
  
1787

  
1788

  
1779 1789
}
src/edu/ucsb/nceas/metacat/ReplicationHandler.java
24 24
 * along with this program; if not, write to the Free Software
25 25
 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
26 26
 */
27
 
27

  
28 28
package edu.ucsb.nceas.metacat;
29 29

  
30 30
import edu.ucsb.nceas.dbadapter.AbstractDatabase;
31 31
import java.sql.*;
32 32
import java.util.*;
33
import java.lang.Thread; 
33
import java.lang.Thread;
34 34
import java.io.*;
35 35
import java.net.*;
36 36
import java.text.*;
......
57 57
{
58 58
  int serverCheckCode = 1;
59 59
  MetaCatUtil util = new MetaCatUtil();
60
  ReplicationServerList serverList = null; 
60
  ReplicationServerList serverList = null;
61 61
  PrintWriter out;
62 62
  private static final AbstractDatabase dbAdapter = MetaCatUtil.dbAdapter;
63
  
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