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/**
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* '$RCSfile$'
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* Copyright: 2004 Regents of the University of California and the
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* National Center for Ecological Analysis and Synthesis
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*
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* '$Author: jones $'
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* '$Date: 2005-11-18 17:10:41 -0800 (Fri, 18 Nov 2005) $'
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* '$Revision: 2769 $'
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*
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* This program is free software; you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation; either version 2 of the License, or
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* (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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*/
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/*
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* Drop all of the objects in proper order
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*/
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set echo off
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DROP SEQUENCE xml_nodes_id_seq;
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DROP SEQUENCE xml_revisions_id_seq;
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DROP SEQUENCE xml_catalog_id_seq;
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DROP SEQUENCE xml_relation_id_seq;
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DROP SEQUENCE xml_replication_id_seq;
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DROP SEQUENCE identifier_id_seq;
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DROP SEQUENCE access_log_id_seq;
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DROP SEQUENCE xml_returnfield_id_seq;
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DROP SEQUENCE xml_queryresult_id_seq;
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DROP SEQUENCE xml_path_index_id_seq;
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/* Drop triggers are not necessary */
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DROP TRIGGER xml_nodes_before_insert;
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DROP TRIGGER xml_revisions_before_insert;
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DROP TRIGGER xml_catalog_before_insert;
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DROP TRIGGER xml_relation_before_insert;
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DROP TRIGGER xml_replication_before_insert;
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DROP TRIGGER identifier_before_insert;
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DROP TRIGGER access_log_before_insert;
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DROP TRIGGER xml_returnfield_before_insert;
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DROP TRIGGER xml_queryresult_before_insert;
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DROP TABLE xml_index;
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DROP TABLE xml_access;
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DROP TABLE xml_accesssubtree;
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DROP TABLE xml_revisions;
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DROP TABLE xml_relation;
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DROP TABLE xml_documents CASCADE CONSTRAINTS;
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DROP TABLE xml_nodes;
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DROP TABLE xml_nodes_revisions;
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DROP TABLE xml_replication;
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DROP TABLE xml_catalog;
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DROP TABLE identifier;
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DROP TABLE access_log;
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DROP TABLE harvest_site_schedule;
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DROP TABLE harvest_detail_log;
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DROP TABLE harvest_log;
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DROP TABLE xml_queryresult;
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DROP TABLE xml_returnfield;
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DROP TABLE xml_path_index;
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/*
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*Replication -- table to store servers that metacat is replicated to
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*/
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CREATE TABLE xml_replication (
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serverid NUMBER(20),
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server VARCHAR2(512),
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last_checked DATE,
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replicate NUMBER(1),
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datareplicate NUMBER(1),
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hub NUMBER(1),
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CONSTRAINT xml_replication_pk PRIMARY KEY (serverid)
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);
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CREATE SEQUENCE xml_replication_id_seq;
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CREATE TRIGGER xml_replication_before_insert
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BEFORE INSERT ON xml_replication FOR EACH ROW
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BEGIN
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SELECT xml_replication_id_seq.nextval
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INTO :new.serverid
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FROM dual;
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END;
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/
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INSERT INTO xml_replication (server, replicate, datareplicate, hub)
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VALUES ('localhost', '0', '0', '0');
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/*
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* Nodes -- table to store XML Nodes (both elements and attributes)
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*/
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CREATE SEQUENCE xml_nodes_id_seq;
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CREATE TABLE xml_nodes (
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nodeid NUMBER(20), -- the unique node id (pk)
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nodeindex NUMBER(10), -- order of nodes within parent
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nodetype VARCHAR2(20), -- type (DOCUMENT, COMMENT, PI,
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-- ELEMENT, ATTRIBUTE, TEXT)
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nodename VARCHAR2(250), -- the name of an element or attribute
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nodeprefix VARCHAR2(50), -- the namespace prefix of an element
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-- or attribute
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nodedata VARCHAR2(4000), -- the data for this node (e.g.,
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-- for TEXT it is the content)
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parentnodeid NUMBER(20), -- index of the parent of this node
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rootnodeid NUMBER(20), -- index of the root node of this tree
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docid VARCHAR2(250), -- index to the document id
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date_created DATE,
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date_updated DATE,
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nodedatanumerical NUMBER, -- the data for this node if
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-- it is a number
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CONSTRAINT xml_nodes_pk PRIMARY KEY (nodeid),
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CONSTRAINT xml_nodes_root_fk
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FOREIGN KEY (rootnodeid) REFERENCES xml_nodes,
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CONSTRAINT xml_nodes_parent_fk
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FOREIGN KEY (parentnodeid) REFERENCES xml_nodes
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);
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CREATE TRIGGER xml_nodes_before_insert
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BEFORE INSERT ON xml_nodes FOR EACH ROW
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BEGIN
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SELECT xml_nodes_id_seq.nextval
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INTO :new.nodeid
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FROM dual;
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END;
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/
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/*
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* Indexes of rootnodeid, parentnodeid, and nodename in xml_nodes
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*/
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CREATE INDEX xml_nodes_idx1 ON xml_nodes (rootnodeid);
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CREATE INDEX xml_nodes_idx2 ON xml_nodes (parentnodeid);
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CREATE INDEX xml_nodes_idx3 ON xml_nodes (nodename);
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/*
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* xml_nodes_revisions -- table to store nodes from xml_nodes which are of old revisions and deleted document
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*/
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CREATE TABLE xml_nodes_revisions (
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nodeid NUMBER(20), -- the unique node id (pk)
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nodeindex NUMBER(10), -- order of nodes within parent
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nodetype VARCHAR2(20), -- type (DOCUMENT, COMMENT, PI,
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-- ELEMENT, ATTRIBUTE, TEXT)
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nodename VARCHAR2(250), -- the name of an element or attribute
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nodeprefix VARCHAR2(50), -- the namespace prefix of an element
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-- or attribute
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nodedata VARCHAR2(4000), -- the data for this node (e.g.,
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-- for TEXT it is the content)
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parentnodeid NUMBER(20), -- index of the parent of this node
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rootnodeid NUMBER(20), -- index of the root node of this tree
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docid VARCHAR2(250), -- index to the document id
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date_created DATE,
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date_updated DATE,
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nodedatanumerical NUMBER, -- the data for this node if
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-- it is a number
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CONSTRAINT xml_nodes_revisions_pk PRIMARY KEY (nodeid),
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CONSTRAINT xml_nodes_revisions_root_fk
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FOREIGN KEY (rootnodeid) REFERENCES xml_nodes_revisions,
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CONSTRAINT xml_nodes_revisions_parent_fk
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FOREIGN KEY (parentnodeid) REFERENCES xml_nodes_revisions
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);
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/*
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* Indexes of rootnodeid, parentnodeid, and nodename in xml_nodes_revision
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*/
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CREATE INDEX xml_nodes_revisions_idx1 ON xml_nodes_revisions (rootnodeid);
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CREATE INDEX xml_nodes_revisions_idx2 ON xml_nodes_revisions (parentnodeid);
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CREATE INDEX xml_nodes_revisions_idx3 ON xml_nodes_revisions (nodename);
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/*
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* XML Catalog -- table to store all external sources for XML documents
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*/
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CREATE TABLE xml_catalog (
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catalog_id NUMBER(20), -- the id for this catalog entry
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entry_type VARCHAR2(500), -- the type of this catalog entry
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-- (e.g., DTD, XSD, XSL)
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source_doctype VARCHAR2(500), -- the source public_id for transforms
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target_doctype VARCHAR2(500), -- the target public_id for transforms
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public_id VARCHAR2(500), -- the unique id for this type
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system_id VARCHAR2(1000), -- the local location of the object
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CONSTRAINT xml_catalog_pk PRIMARY KEY (catalog_id),
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CONSTRAINT xml_catalog_uk UNIQUE
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(entry_type, source_doctype, target_doctype, public_id)
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);
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CREATE SEQUENCE xml_catalog_id_seq;
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CREATE TRIGGER xml_catalog_before_insert
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BEFORE INSERT ON xml_catalog FOR EACH ROW
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BEGIN
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SELECT xml_catalog_id_seq.nextval
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INTO :new.catalog_id
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FROM dual;
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END;
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/
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/*
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* Documents -- table to store XML documents
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*/
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CREATE TABLE xml_documents (
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docid VARCHAR2(250), -- the document id #
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rootnodeid NUMBER(20), -- reference to root node of the DOM
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docname VARCHAR2(100), -- usually the root element name
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doctype VARCHAR2(100), -- public id indicating document type
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user_owner VARCHAR2(100), -- the user owned the document
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user_updated VARCHAR2(100), -- the user updated the document
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server_location NUMBER(20), -- the server on which this document
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-- originates
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rev NUMBER(10) DEFAULT 1,--the revision number of the docume
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date_created DATE,
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date_updated DATE,
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public_access NUMBER(1), -- flag for public access
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catalog_id NUMBER(20), -- reference to xml_catalog
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CONSTRAINT xml_documents_pk PRIMARY KEY (docid),
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CONSTRAINT xml_documents_rep_fk
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FOREIGN KEY (server_location) REFERENCES xml_replication,
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CONSTRAINT xml_documents_root_fk
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FOREIGN KEY (rootnodeid) REFERENCES xml_nodes,
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CONSTRAINT xml_documents_catalog_fk
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FOREIGN KEY (catalog_id) REFERENCES xml_catalog
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);
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/*
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* Index of <docid,doctype> in xml_document
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*/
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CREATE INDEX xml_documents_idx1 ON xml_documents (docid, doctype);
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/*
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* Revised Documents -- table to store XML documents saved after an UPDATE
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* or DELETE
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*/
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CREATE TABLE xml_revisions (
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revisionid NUMBER(20), -- the revision number we are saving
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docid VARCHAR2(250), -- the document id #
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rootnodeid NUMBER(20), -- reference to root node of the DOM
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docname VARCHAR2(100), -- usually the root element name
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doctype VARCHAR2(100), -- public id indicating document type
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user_owner VARCHAR2(100),
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user_updated VARCHAR2(100),
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server_location NUMBER(20),
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rev NUMBER(10),
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date_created DATE,
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date_updated DATE,
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public_access NUMBER(1), -- flag for public access
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catalog_id NUMBER(20), -- reference to xml_catalog
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CONSTRAINT xml_revisions_pk PRIMARY KEY (revisionid),
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CONSTRAINT xml_revisions_rep_fk
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FOREIGN KEY (server_location) REFERENCES xml_replication,
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CONSTRAINT xml_revisions_root_fk
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FOREIGN KEY (rootnodeid) REFERENCES xml_nodes_revisions,
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CONSTRAINT xml_revisions_catalog_fk
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FOREIGN KEY (catalog_id) REFERENCES xml_catalog
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);
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CREATE SEQUENCE xml_revisions_id_seq;
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CREATE TRIGGER xml_revisions_before_insert
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BEFORE INSERT ON xml_revisions FOR EACH ROW
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BEGIN
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SELECT xml_revisions_id_seq.nextval
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INTO :new.revisionid
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FROM dual;
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END;
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/
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/*
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* ACL -- table to store ACL for XML documents by principals
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*/
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CREATE TABLE xml_access (
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docid VARCHAR2(250), -- the document id #
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accessfileid VARCHAR2(250), -- the document id # for the access file
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principal_name VARCHAR2(100), -- name of user, group, etc.
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permission NUMBER(1), -- "read", "write", "all"
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perm_type VARCHAR2(32), -- "allowed" or "denied"
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perm_order VARCHAR2(32), -- "allow first" or "deny first"
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begin_time DATE, -- the time that permission begins
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end_time DATE, -- the time that permission ends
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ticket_count NUMBER(5), -- ticket counter for that permission
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subtreeid VARCHAR2(32), -- sub tree id
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startnodeid NUMBER(20), -- start node for sub tree
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endnodeid NUMBER(20), -- end node for sub tree
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CONSTRAINT xml_access_ck CHECK (begin_time < end_time),
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CONSTRAINT xml_access_accessfileid_fk
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FOREIGN KEY (accessfileid) REFERENCES xml_documents
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);
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/*
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* Index of Nodes -- table to store precomputed paths through tree for
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* quick searching in structured searches
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*/
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CREATE TABLE xml_index (
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nodeid NUMBER(20), -- the unique node id
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path VARCHAR2(1000), -- precomputed path through tree
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docid VARCHAR2(250), -- index to the document id
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doctype VARCHAR2(100), -- public id indicating document type
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parentnodeid NUMBER(20), -- id of the parent of the node
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-- represented by this row
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CONSTRAINT xml_index_pk PRIMARY KEY (nodeid,path),
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CONSTRAINT xml_index_nodeid_fk FOREIGN KEY (nodeid) REFERENCES xml_nodes,
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CONSTRAINT xml_index_docid_fk
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FOREIGN KEY (docid) REFERENCES xml_documents
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);
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/*
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* Index of the paths in xml_index
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*/
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CREATE INDEX xml_index_idx1 ON xml_index (path);
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/*
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* Index of Paths - table to store nodes with paths specified by userst in metacat.properties
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*/
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CREATE TABLE xml_path_index (
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nodeid NUMBER(20), -- the unique node id
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docid VARCHAR2(250), -- index to the document id
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path VARCHAR2(1000), -- precomputed path through tree
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nodedata VARCHAR2(4000), -- the data for this node e.g.,
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nodedatanumerical NUMBER(20), -- the data for this node if
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parentnodeid NUMBER(20), -- index of the parent of this node
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CONSTRAINT xml_path_index_pk PRIMARY KEY (nodeid),
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CONSTRAINT xml_path_index_docid_fk FOREIGN KEY (docid) REFERENCES xml_documents
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);
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/*
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* create sequence an trigger
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*/
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CREATE SEQUENCE xml_path_index_id_seq;
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CREATE TRIGGER xml_path_index_before_insert
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BEFORE INSERT ON xml_path_index FOR EACH ROW
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BEGIN
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SELECT xml_path_index_id_seq.nextval
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INTO :new.nodeid
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FROM dual;
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END;
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/
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349
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/*
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* Index of the path, nodedata, nodedatanumerical in xml_path_index
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*/
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CREATE INDEX xml_path_index_idx1 ON xml_path_index (path);
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CREATE INDEX xml_path_index_idx2 ON xml_path_index (nodedata);
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355
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CREATE INDEX xml_path_index_idx3 ON xml_path_index (nodedatanumerical);
|
|
356
|
|
|
357
|
|
|
358
|
|
|
359
|
CREATE TABLE xml_relation (
|
|
360
|
relationid NUMBER(20) PRIMARY KEY, -- unique id
|
|
361
|
docid VARCHAR2(250), -- the docid of the package file
|
|
362
|
-- that this relation came from
|
|
363
|
packagetype VARCHAR2(250), -- the type of the package
|
|
364
|
subject VARCHAR2(512) NOT NULL, -- the subject of the relation
|
|
365
|
subdoctype VARCHAR2(128), -- the doctype of the subject
|
|
366
|
relationship VARCHAR2(128) NOT NULL,-- the relationship type
|
|
367
|
object VARCHAR2(512) NOT NULL, -- the object of the relation
|
|
368
|
objdoctype VARCHAR2(128), -- the doctype of the object
|
|
369
|
CONSTRAINT xml_relation_uk UNIQUE (docid, subject, relationship, object),
|
|
370
|
CONSTRAINT xml_relation_docid_fk
|
|
371
|
FOREIGN KEY (docid) REFERENCES xml_documents
|
|
372
|
);
|
|
373
|
|
|
374
|
CREATE SEQUENCE xml_relation_id_seq;
|
|
375
|
|
|
376
|
CREATE TRIGGER xml_relation_before_insert
|
|
377
|
BEFORE INSERT ON xml_relation FOR EACH ROW
|
|
378
|
BEGIN
|
|
379
|
SELECT xml_relation_id_seq.nextval
|
|
380
|
INTO :new.relationid
|
|
381
|
FROM dual;
|
|
382
|
END;
|
|
383
|
/
|
|
384
|
|
|
385
|
/*
|
|
386
|
* Table used to store all document identifiers in metacat. Each identifier
|
|
387
|
* consists of 4 subparts, an authority, namespace, object, and revision as
|
|
388
|
* defined in the LSID specification.
|
|
389
|
*/
|
|
390
|
CREATE SEQUENCE identifier_id_seq;
|
|
391
|
CREATE TABLE identifier (
|
|
392
|
id NUMBER(20) PRIMARY KEY, -- primary key
|
|
393
|
authority VARCHAR2(255), -- the authority issuing the identifier
|
|
394
|
namespace VARCHAR2(255), -- the namespace qualifying the identifier
|
|
395
|
object VARCHAR2(255), -- the local part of the identifier for a particular object
|
|
396
|
revision VARCHAR2(255) -- the revision part of the identifier
|
|
397
|
);
|
|
398
|
CREATE TRIGGER identifier_before_insert
|
|
399
|
BEFORE INSERT ON identifier FOR EACH ROW
|
|
400
|
BEGIN
|
|
401
|
SELECT identifier_id_seq.nextval
|
|
402
|
INTO :new.id
|
|
403
|
FROM dual;
|
|
404
|
END;
|
|
405
|
/
|
|
406
|
|
|
407
|
/*
|
|
408
|
* accesssubtree -- table to store access subtree info
|
|
409
|
*/
|
|
410
|
CREATE TABLE xml_accesssubtree (
|
|
411
|
docid VARCHAR2(250), -- the document id #
|
|
412
|
rev NUMBER(10) DEFAULT 1, --the revision number of the docume
|
|
413
|
controllevel VARCHAR2(50), -- the level it control -- document or subtree
|
|
414
|
subtreeid VARCHAR2(250), -- the subtree id
|
|
415
|
startnodeid NUMBER(20), -- the start node id of access subtree
|
|
416
|
endnodeid NUMBER(20), -- the end node if of access subtree
|
|
417
|
CONSTRAINT xml_accesssubtree_docid_fk
|
|
418
|
FOREIGN KEY (docid) REFERENCES xml_documents
|
|
419
|
);
|
|
420
|
|
|
421
|
/*
|
|
422
|
* Returnfields -- table to store combinations of returnfields requested
|
|
423
|
* and the number of times this table is accessed
|
|
424
|
*/
|
|
425
|
CREATE TABLE xml_returnfield (
|
|
426
|
returnfield_id NUMBER(20), -- the id for this returnfield entry
|
|
427
|
returnfield_string VARCHAR2(2000), -- the returnfield string
|
|
428
|
usage_count NUMBER(20), -- the number of times this string
|
|
429
|
-- has been requested
|
|
430
|
CONSTRAINT xml_returnfield_pk PRIMARY KEY (returnfield_id)
|
|
431
|
);
|
|
432
|
CREATE INDEX xml_returnfield_idx1 ON xml_returnfield(returnfield_string);
|
|
433
|
|
|
434
|
CREATE SEQUENCE xml_returnfield_id_seq;
|
|
435
|
|
|
436
|
CREATE TRIGGER xml_returnfield_before_insert
|
|
437
|
BEFORE INSERT ON xml_returnfield FOR EACH ROW
|
|
438
|
BEGIN
|
|
439
|
SELECT xml_returnfield_id_seq.nextval
|
|
440
|
INTO :new.returnfield_id
|
|
441
|
FROM dual;
|
|
442
|
END;
|
|
443
|
/
|
|
444
|
|
|
445
|
/*
|
|
446
|
* Queryresults -- table to store queryresults for a given docid
|
|
447
|
* and returnfield_id
|
|
448
|
*/
|
|
449
|
CREATE TABLE xml_queryresult(
|
|
450
|
queryresult_id NUMBER(20), -- id for this entry
|
|
451
|
returnfield_id NUMBER(20), -- id for the returnfield corresponding to this entry
|
|
452
|
docid VARCHAR2(250), -- docid of the document
|
|
453
|
queryresult_string VARCHAR2(4000), -- resultant text generated for this docid and given
|
|
454
|
-- returnfield
|
|
455
|
CONSTRAINT xml_queryresult_pk PRIMARY KEY (queryresult_id),
|
|
456
|
CONSTRAINT xml_queryresult_searchid_fk
|
|
457
|
FOREIGN KEY (returnfield_id) REFERENCES xml_returnfield
|
|
458
|
);
|
|
459
|
|
|
460
|
CREATE INDEX xml_queryresult_idx1 ON xml_queryresult (returnfield_id, docid);
|
|
461
|
|
|
462
|
CREATE SEQUENCE xml_queryresult_id_seq;
|
|
463
|
|
|
464
|
CREATE TRIGGER xml_queryresult_before_insert
|
|
465
|
BEFORE INSERT ON xml_queryresult FOR EACH ROW
|
|
466
|
BEGIN
|
|
467
|
SELECT xml_queryresult_id_seq.nextval
|
|
468
|
INTO :new.queryresult_id
|
|
469
|
FROM dual;
|
|
470
|
END;
|
|
471
|
/
|
|
472
|
|
|
473
|
|
|
474
|
|
|
475
|
|
|
476
|
/*
|
|
477
|
* Logging -- table to store metadata and data access log
|
|
478
|
*/
|
|
479
|
CREATE TABLE access_log (
|
|
480
|
entryid NUMBER(20), -- the identifier for the log event
|
|
481
|
ip_address VARCHAR2(512), -- the ip address inititiating the event
|
|
482
|
principal VARCHAR2(512), -- the user initiiating the event
|
|
483
|
docid VARCHAR2(250), -- the document id #
|
|
484
|
event VARCHAR2(512), -- the code symbolizing the event type
|
|
485
|
date_logged DATE, -- the datetime on which the event occurred
|
|
486
|
CONSTRAINT access_log_pk PRIMARY KEY (entryid)
|
|
487
|
);
|
|
488
|
|
|
489
|
CREATE SEQUENCE access_log_id_seq;
|
|
490
|
CREATE TRIGGER access_log_before_insert
|
|
491
|
BEFORE INSERT ON access_log FOR EACH ROW
|
|
492
|
BEGIN
|
|
493
|
SELECT access_log_id_seq.nextval
|
|
494
|
INTO :new.entryid
|
|
495
|
FROM dual;
|
|
496
|
END;
|
|
497
|
/
|
|
498
|
|
|
499
|
/*
|
|
500
|
* harvest_site_schedule -- table to store harvest sites and schedule info
|
|
501
|
*/
|
|
502
|
CREATE TABLE harvest_site_schedule (
|
|
503
|
site_schedule_id NUMBER, -- unique id
|
|
504
|
documentlisturl VARCHAR2(255), -- URL of the site harvest document list
|
|
505
|
ldapdn VARCHAR2(255), -- LDAP distinguished name for site account
|
|
506
|
datenextharvest DATE, -- scheduled date of next harvest
|
|
507
|
datelastharvest DATE, -- recorded date of last harvest
|
|
508
|
updatefrequency NUMBER, -- the harvest update frequency
|
|
509
|
unit VARCHAR2(50), -- update unit -- days weeks or months
|
|
510
|
contact_email VARCHAR2(50), -- email address of the site contact person
|
|
511
|
ldappwd VARCHAR2(20), -- LDAP password for site account
|
|
512
|
CONSTRAINT harvest_site_schedule_pk PRIMARY KEY (site_schedule_id)
|
|
513
|
);
|
|
514
|
|
|
515
|
/*
|
|
516
|
* harvest_log -- table to log entries for harvest operations
|
|
517
|
*/
|
|
518
|
CREATE TABLE harvest_log (
|
|
519
|
harvest_log_id NUMBER, -- unique id
|
|
520
|
harvest_date DATE, -- date of the current harvest
|
|
521
|
status NUMBER, -- non-zero indicates an error status
|
|
522
|
message VARCHAR2(1000), -- text message for this log entry
|
|
523
|
harvest_operation_code VARCHAR2(30), -- the type of harvest operation
|
|
524
|
site_schedule_id NUMBER, -- site schedule id, or 0 if no site
|
|
525
|
CONSTRAINT harvest_log_pk PRIMARY KEY (harvest_log_id)
|
|
526
|
);
|
|
527
|
|
|
528
|
/*
|
|
529
|
* harvest_detail_log -- table to log detailed info about documents that
|
|
530
|
* generated errors during the harvest
|
|
531
|
*/
|
|
532
|
CREATE TABLE harvest_detail_log (
|
|
533
|
detail_log_id NUMBER, -- unique id
|
|
534
|
harvest_log_id NUMBER, -- ponter to the related log entry
|
|
535
|
scope VARCHAR2(50), -- document scope
|
|
536
|
identifier NUMBER, -- document identifier
|
|
537
|
revision NUMBER, -- document revision
|
|
538
|
document_url VARCHAR2(255), -- document URL
|
|
539
|
error_message VARCHAR2(1000), -- text error message
|
|
540
|
document_type VARCHAR2(100), -- document type
|
|
541
|
CONSTRAINT harvest_detail_log_pk PRIMARY KEY (detail_log_id),
|
|
542
|
CONSTRAINT harvest_detail_log_fk
|
|
543
|
FOREIGN KEY (harvest_log_id) REFERENCES harvest_log
|
|
544
|
);
|
|
545
|
|