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MetaCat API: Index
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  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <FONT CLASS="NavBarFont1">Package</FONT>&nbsp;</TD>
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  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <FONT CLASS="NavBarFont1">Class</FONT>&nbsp;</TD>
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<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_Q_">Q</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A> <HR>
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<A NAME="_A_"><!-- --></A><H2>
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<B>A</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html"><B>AccessionNumber</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>.<DD>A class that generates an Accession Number and will check a submitted
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 accession number for uniqueness and register it into the db connection<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html#AccessionNumber()"><B>AccessionNumber()</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>
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<DD>&nbsp;
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html"><B>AccessionNumberException</B></A> - exception edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html">AccessionNumberException</A>.<DD>Exception thrown when an error occurs because an AccessionNumber was
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 invalid or used incorrectly.<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html#AccessionNumberException(java.lang.String)"><B>AccessionNumberException(String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberException.html">AccessionNumberException</A>
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<DD>Create a new AccessionNumberException.
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html"><B>AccessionNumberGeneratedException</B></A> - exception edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html">AccessionNumberGeneratedException</A>.<DD>Exception thrown when a new accession number is generated
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 either because none was provided or it was not unique.<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html#AccessionNumberGeneratedException(java.lang.String)"><B>AccessionNumberGeneratedException(String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumberGeneratedException.html">AccessionNumberGeneratedException</A>
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<DD>Create a new AccessionNumberGeneratedException.
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#addChildNode(edu.ucsb.nceas.metacat.BasicNode)"><B>addChildNode(BasicNode)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Add a child node to this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#atFirstElement()"><B>atFirstElement()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>get the document processing state
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#attributeDecl(java.lang.String, java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>attributeDecl(String, String, String, String, String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of attribute declarations
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</DL>
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<HR>
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<A NAME="_B_"><!-- --></A><H2>
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<B>B</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html"><B>BasicNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>.<DD>A Class that represents an XML node and its contents<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#BasicNode()"><B>BasicNode()</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Construct a Basic Node
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#BasicNode(long, java.lang.String, long, int)"><B>BasicNode(long, String, long, int)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Construct a Basic Node
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#BasicNode(java.lang.String)"><B>BasicNode(String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Construct a Basic Node
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#BasicNode(java.lang.String, long, int)"><B>BasicNode(String, long, int)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Construct a Basic Node
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</DL>
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<HR>
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<A NAME="_C_"><!-- --></A><H2>
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<B>C</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#characters(char[], int, int)"><B>characters(char[], int, int)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called for each XML text node
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#characters(char[], int, int)"><B>characters(char[], int, int)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
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<DD>callback method used by the SAX Parser when the text sequences of an
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 xml stream are detected.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#comment(char[], int, int)"><B>comment(char[], int, int)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of comments in the DTD
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#createQuery(java.lang.String)"><B>createQuery(String)</B></A> -
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>format a simple free-text value query as an XML document that conforms
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 to the pathquery.dtd and is appropriate for submission to the DBQuery
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 structured query engine
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#createQuery(java.lang.String, java.lang.String)"><B>createQuery(String, String)</B></A> -
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>format a simple free-text value query as an XML document that conforms
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 to the pathquery.dtd and is appropriate for submission to the DBQuery
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 structured query engine
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</DL>
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<HR>
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<A NAME="_D_"><!-- --></A><H2>
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<B>D</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html"><B>DBDTDHandler</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>.<DD>A database aware Class implementing DTDHandler interface for the SAX
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 parser to call when processing the XML stream and intercepting notations
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 and unparsed entities<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html#DBDTDHandler(java.sql.Connection)"><B>DBDTDHandler(Connection)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>
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<DD>Construct an instance of the DBDTDHandler clas
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<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html"><B>DBEntityResolver</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A>.<DD>A database aware Class implementing EntityResolver interface for the SAX
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 parser to call when processing the XML stream and intercepting any
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 external entities (including the external DTD subset and external
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 parameter entities, if any) before including them.<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html#DBEntityResolver(java.sql.Connection, edu.ucsb.nceas.metacat.DBSAXHandler)"><B>DBEntityResolver(Connection, DBSAXHandler)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A>
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<DD>Construct an instance of the DBEntityResolver clas
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<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html"><B>DBQuery</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>.<DD>A Class that searches a relational DB for elements and
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 attributes that have free text matches a query string,
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 or structured query matches to a path specified node in the
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 XML hierarchy.<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#DBQuery(java.sql.Connection, java.lang.String)"><B>DBQuery(Connection, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
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<DD>construct an instance of the DBQuery class
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html"><B>DBReader</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>.<DD>A Class that creates an XML text document
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 from a query to a relational DB containing a DOM representation<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html"><B>DBReader.DoctypeInfo</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>.<DD>A utility class that encapsulates document type information<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#DBReader.DoctypeInfo(edu.ucsb.nceas.metacat.DBReader, java.lang.String, java.lang.String, java.lang.String)"><B>DBReader.DoctypeInfo(DBReader, String, String, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
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<DD>Constructor
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#DBReader(java.sql.Connection)"><B>DBReader(Connection)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>construct a DBReader instance.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html"><B>DBSAXDocument</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>.<DD>A Class that writes an XML document main data to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#DBSAXDocument(java.sql.Connection)"><B>DBSAXDocument(Connection)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
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<DD>Construct a new document instance, used for deleting documents
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#DBSAXDocument(java.sql.Connection, long, java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>DBSAXDocument(Connection, long, String, String, String, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
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<DD>Construct a new document instance
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html"><B>DBSAXHandler</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>.<DD>A database aware Class implementing callback bethods for the SAX parser to
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 call when processing the XML stream and generating events<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#DBSAXHandler(java.sql.Connection)"><B>DBSAXHandler(Connection)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>Construct an instance of the handler class
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#DBSAXHandler(java.sql.Connection, java.lang.String, java.lang.String)"><B>DBSAXHandler(Connection, String, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>Construct an instance of the handler class
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html"><B>DBSAXNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>.<DD>A Class that represents an XML node and its contents and
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 can write its own representation to a database connection<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#DBSAXNode(java.sql.Connection, java.lang.String)"><B>DBSAXNode(Connection, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
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<DD>Construct a new node instance for DOCUMENT nodes
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#DBSAXNode(java.sql.Connection, java.lang.String, edu.ucsb.nceas.metacat.DBSAXNode, edu.ucsb.nceas.metacat.DBSAXNode, edu.ucsb.nceas.metacat.DBSAXDocument)"><B>DBSAXNode(Connection, String, DBSAXNode, DBSAXNode, DBSAXDocument)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
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<DD>Construct a new node instance for ELEMENT nodes
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html"><B>DBSimpleQuery</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>.<DD>A Class that searches a relational DB for elements and attributes that
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 have free text matches to the query string.<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#DBSimpleQuery(java.sql.Connection)"><B>DBSimpleQuery(Connection)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
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<DD>construct an instance of the DBSimpleQuery class
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html"><B>DBTransform</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>.<DD>A Class that transforms XML documents utitlizing XSL style sheets<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#DBTransform(java.sql.Connection)"><B>DBTransform(Connection)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
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<DD>construct a DBTransform instance.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html"><B>DBValidate</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>.<DD>Name: DBValidate.java
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       Purpose: A Class that validates XML documents
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 			   This class is designed to be parser independent
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    			   i.e.<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#DBValidate(java.lang.String)"><B>DBValidate(String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>
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<DD>Construct a new validation object
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<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#DBValidate(java.lang.String, java.lang.String)"><B>DBValidate(String, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>
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<DD>Construct a new validation object
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html"><B>DBWriter</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>.<DD>A Class that reads in an XML text document and
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 write its contents to a database connection using SAX<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#DBWriter(java.sql.Connection, java.lang.String)"><B>DBWriter(Connection, String)</B></A> -
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Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
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<DD>construct a new instance of the class to write an XML file to the database
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#debugMessage(int)"><B>debugMessage(int)</B></A> -
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
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<DD>Utility method to print debugging messages
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#debugMessage(java.lang.String)"><B>debugMessage(String)</B></A> -
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Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
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<DD>Utility method to print debugging messages
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<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#delete(java.lang.String)"><B>delete(String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
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<DD>Delete an XML file from the database (actually, just make it a revision
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 in the xml_revisions table)
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#doGet(javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)"><B>doGet(HttpServletRequest, HttpServletResponse)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
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<DD>Handle "GET" method requests from HTTP clients
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#doPost(javax.servlet.http.HttpServletRequest, javax.servlet.http.HttpServletResponse)"><B>doPost(HttpServletRequest, HttpServletResponse)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
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<DD>Handle "POST" method requests from HTTP clients
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</DL>
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<HR>
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<A NAME="_E_"><!-- --></A><H2>
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<B>E</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/package-summary.html"><B>edu.ucsb.nceas.metacat</B></A> - package edu.ucsb.nceas.metacat<DD>&nbsp;<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#elementDecl(java.lang.String, java.lang.String)"><B>elementDecl(String, String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of element declarations
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<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html"><B>ElementNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>.<DD>A Class that represents an XML element and its contents,
212 138 jones
 and can build itself from a database connection<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html#ElementNode(java.sql.Connection)"><B>ElementNode(Connection)</B></A> -
213
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>
214
<DD>Construct a new ElementNode instance
215
<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html#ElementNode(java.sql.Connection, long)"><B>ElementNode(Connection, long)</B></A> -
216
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>
217
<DD>Construct a new ElementNode instance
218
<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html#ElementNode(java.sql.Connection, long, long, java.lang.String, java.lang.String)"><B>ElementNode(Connection, long, long, String, String)</B></A> -
219
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>
220
<DD>Construct a new ElementNode instance
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endCDATA()"><B>endCDATA()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of the end of CDATA sections
224 107 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endDocument()"><B>endDocument()</B></A> -
225
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
226
<DD>SAX Handler that receives notification of end of the document
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endDTD()"><B>endDTD()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of end of DTD
230
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endElement(java.lang.String, java.lang.String, java.lang.String)"><B>endElement(String, String, String)</B></A> -
231
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called at the end of each XML element
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#endElement(java.lang.String, java.lang.String, java.lang.String)"><B>endElement(String, String, String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
235
<DD>callback method used by the SAX Parser when the end tag of an
236
 element is detected.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#endEntity(java.lang.String)"><B>endEntity(String)</B></A> -
238
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
239
<DD>SAX Handler that receives notification of the end of entities
240
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#error(org.xml.sax.SAXParseException)"><B>error(SAXParseException)</B></A> -
241
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
242
<DD>SAX Handler that receives notification of recoverable parsing errors
243
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#externalEntityDecl(java.lang.String, java.lang.String, java.lang.String)"><B>externalEntityDecl(String, String, String)</B></A> -
244
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
245
<DD>SAX Handler that receives notification of external entity declarations
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</DL>
247
<HR>
248
<A NAME="_F_"><!-- --></A><H2>
249
<B>F</B></H2>
250
<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#fatalError(org.xml.sax.SAXParseException)"><B>fatalError(SAXParseException)</B></A> -
252
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
253
<DD>SAX Handler that receives notification of fatal parsing errors
254
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#fileToURL(java.io.File)"><B>fileToURL(File)</B></A> -
255
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
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<DD>Utility method to convert a file handle into a URL
257 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#findDocuments(java.io.Reader)"><B>findDocuments(Reader)</B></A> -
258
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
259
<DD>routine to search the elements and attributes looking to match query
260 107 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#findDocuments(java.lang.String)"><B>findDocuments(String)</B></A> -
261 51 jones
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
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<DD>routine to search the elements and attributes looking to match query
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#findDocuments(java.lang.String, java.lang.String)"><B>findDocuments(String, String)</B></A> -
264
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
265
<DD>routine to search the elements and attributes looking to match query
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</DL>
267
<HR>
268
<A NAME="_G_"><!-- --></A><H2>
269
<B>G</B></H2>
270
<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html#generate(java.lang.String, java.lang.String)"><B>generate(String, String)</B></A> -
272
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/AccessionNumber.html">AccessionNumber</A>
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<DD>Get an accession number from the user, check it for uniqueness
274
 and register it into new db connection.
275 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getAttribute(java.lang.String)"><B>getAttribute(String)</B></A> -
276
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
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<DD>Get an attribute value by name
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getAttributes()"><B>getAttributes()</B></A> -
279
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
280 31 jones
<DD>Get the attributes as a string
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getChildren()"><B>getChildren()</B></A> -
282
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
283
<DD>Get the an enumeration of the children of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getDocID()"><B>getDocID()</B></A> -
285
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
286
<DD>Get the doc id of this node
287
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getDocID()"><B>getDocID()</B></A> -
288
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
289
<DD>Get doc id
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#getDocname()"><B>getDocname()</B></A> -
291
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
292
<DD>get the document name
293 107 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDocname()"><B>getDocname()</B></A> -
294
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
295
<DD>get the document name
296
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getDoctype()"><B>getDoctype()</B></A> -
297
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
298
<DD>get the document type
299 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getDoctype()"><B>getDoctype()</B></A> -
300
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
301
<DD>Get doctype
302 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getDoctypeInfo(java.lang.String)"><B>getDoctypeInfo(String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
304
<DD>Look up the document type information from the database
305 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#getNodeData()"><B>getNodeData()</B></A> -
306
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>
307
<DD>Get the node data as a string value
308
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getNodeID()"><B>getNodeID()</B></A> -
309
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
310
<DD>Get the id of this node
311
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getNodeIndex()"><B>getNodeIndex()</B></A> -
312
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
313
<DD>Get nodeIndex of the node
314
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getNodeType()"><B>getNodeType()</B></A> -
315
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
316
<DD>Get the type of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#getOption(java.lang.String)"><B>getOption(String)</B></A> -
318
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
319
<DD>Utility method to get an option value from the properties file
320 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getParentID()"><B>getParentID()</B></A> -
321
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
322
<DD>Get the parent id of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#getParentNode()"><B>getParentNode()</B></A> -
324
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
325
<DD>get the parent of this node
326
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#getRootNode(java.lang.String)"><B>getRootNode(String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
328
<DD>Get the root node id for an XML document given a document id
329 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getRootNodeID()"><B>getRootNodeID()</B></A> -
330
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
331
<DD>Get the root node id of this node
332 107 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html#getSystemID()"><B>getSystemID()</B></A> -
333
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.DoctypeInfo.html">DBReader.DoctypeInfo</A>
334
<DD>get the system identifier
335
<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#getSystemId(java.lang.String, java.lang.String, java.lang.String)"><B>getSystemId(String, String, String)</B></A> -
336
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
337
<DD>Lookup a stylesheet reference from the db catalog
338 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#getTagName()"><B>getTagName()</B></A> -
339
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
340
<DD>Get the name of this node
341 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#getTitle()"><B>getTitle()</B></A> -
342
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
343
<DD>Get the document title
344 31 jones
</DL>
345
<HR>
346
<A NAME="_I_"><!-- --></A><H2>
347
<B>I</B></H2>
348
<DL>
349 51 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#ignorableWhitespace(char[], int, int)"><B>ignorableWhitespace(char[], int, int)</B></A> -
350
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
351 31 jones
<DD>SAX Handler that is called for each XML text node that is Ignorable
352
 white space
353 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#incChildNum()"><B>incChildNum()</B></A> -
354
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
355
<DD>increase childNum when new child for the node is created
356 51 jones
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#init(javax.servlet.ServletConfig)"><B>init(ServletConfig)</B></A> -
357
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
358 50 jones
<DD>Initialize the servlet by creating appropriate database connections
359 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#internalEntityDecl(java.lang.String, java.lang.String)"><B>internalEntityDecl(String, String)</B></A> -
360
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
361
<DD>SAX Handler that receives notification of internal entity declarations
362 31 jones
</DL>
363
<HR>
364
<A NAME="_M_"><!-- --></A><H2>
365
<B>M</B></H2>
366
<DL>
367 107 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#main(java.lang.String[])"><B>main(String[])</B></A> -
368
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
369
<DD>the main routine used to test the transform utility.
370 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBQuery.html#main(java.lang.String[])"><B>main(String[])</B></A> -
371
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBQuery.html">DBQuery</A>
372
<DD>the main routine used to test the DBQuery utility.
373 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#main(java.lang.String[])"><B>main(String[])</B></A> -
374
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>
375
<DD>main method for testing
376
377 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#main(java.lang.String[])"><B>main(String[])</B></A> -
378
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
379
<DD>the main routine used to test the DBWriter utility.
380 52 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#main(java.lang.String[])"><B>main(String[])</B></A> -
381
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
382
<DD>main routine used for testing.
383 51 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html#main(java.lang.String[])"><B>main(String[])</B></A> -
384
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSimpleQuery.html">DBSimpleQuery</A>
385 31 jones
<DD>the main routine used to test the DBSimpleQuery utility.
386 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#main(java.lang.String[])"><B>main(String[])</B></A> -
387
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
388
<DD>Main routine for testing
389 51 jones
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html"><B>MetaCatServlet</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>.<DD>A metadata catalog server implemented as a Java Servlet
390 50 jones
391 51 jones
 <DT><A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html#MetaCatServlet()"><B>MetaCatServlet()</B></A> -
392
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatServlet.html">MetaCatServlet</A>
393 50 jones
<DD>&nbsp;
394 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html"><B>MetaCatUtil</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>.<DD>A suite of utility classes for the metadata catalog server<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#MetaCatUtil()"><B>MetaCatUtil()</B></A> -
395
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
396 205 jones
<DD>Construct an instance of the utility class
397 31 jones
</DL>
398
<HR>
399 107 jones
<A NAME="_N_"><!-- --></A><H2>
400
<B>N</B></H2>
401 51 jones
<DL>
402 107 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html#notationDecl(java.lang.String, java.lang.String, java.lang.String)"><B>notationDecl(String, String, String)</B></A> -
403
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>
404
<DD>Notation declarations are not signaled
405 51 jones
</DL>
406
<HR>
407 138 jones
<A NAME="_O_"><!-- --></A><H2>
408
<B>O</B></H2>
409
<DL>
410 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#openDBConnection()"><B>openDBConnection()</B></A> -
411
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
412
<DD>Utility method to establish a JDBC database connection using connection
413
 info from the properties file
414 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html#openDBConnection(java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>openDBConnection(String, String, String, String)</B></A> -
415
Static method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/MetaCatUtil.html">MetaCatUtil</A>
416
<DD>Utility method to establish a JDBC database connection
417
</DL>
418
<HR>
419 107 jones
<A NAME="_P_"><!-- --></A><H2>
420
<B>P</B></H2>
421
<DL>
422 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#printSQL()"><B>printSQL()</B></A> -
423
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
424
<DD>create a SQL serialization of the query that this instance represents
425 107 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#processingInstruction(java.lang.String, java.lang.String)"><B>processingInstruction(String, String)</B></A> -
426
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
427 138 jones
<DD>SAX Handler called once for each processing instruction found:
428
 node that PI may occur before or after the root element.
429 107 jones
</DL>
430
<HR>
431 182 jones
<A NAME="_Q_"><!-- --></A><H2>
432
<B>Q</B></H2>
433
<DL>
434
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html"><B>QuerySpecification</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>.<DD>A Class that represents a structured query, and can be
435
 constructed from an XML serialization conforming to @see pathquery.dtd.<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#QuerySpecification(java.io.Reader, java.lang.String)"><B>QuerySpecification(Reader, String)</B></A> -
436
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
437
<DD>construct an instance of the QuerySpecification class
438
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#QuerySpecification(java.lang.String, java.lang.String)"><B>QuerySpecification(String, String)</B></A> -
439
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
440
<DD>construct an instance of the QuerySpecification class
441
</DL>
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<HR>
443 31 jones
<A NAME="_R_"><!-- --></A><H2>
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<B>R</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBReader.html#readXMLDocument(java.lang.String)"><B>readXMLDocument(String)</B></A> -
447 51 jones
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBReader.html">DBReader</A>
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<DD>Create an XML document from the database starting with the element
449
 having element_id nodeid
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<DT><A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html#resolveEntity(java.lang.String, java.lang.String)"><B>resolveEntity(String, String)</B></A> -
451
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBEntityResolver.html">DBEntityResolver</A>
452
<DD>The Parser call this method before opening any external entity
453
 except the top-level document entity (including the external DTD subset,
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 external entities referenced within the DTD, and external entities
455
 referenced within the document element)
456 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#returnErrors()"><B>returnErrors()</B></A> -
457
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>
458
<DD>provide a list of errors fromthe validation process
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</DL>
460
<HR>
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<A NAME="_S_"><!-- --></A><H2>
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<B>S</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#saveDocument(java.lang.String)"><B>saveDocument(String)</B></A> -
465
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
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<DD>Save a document entry in the xml_revisions table
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setAttribute(java.lang.String, java.lang.String)"><B>setAttribute(String, String)</B></A> -
468
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
469
<DD>Add a new attribute to this node, or set its value
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#setAttribute(java.lang.String, java.lang.String)"><B>setAttribute(String, String)</B></A> -
471
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
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<DD>Add a new attribute to this node, or set its value
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setDocID(java.lang.String)"><B>setDocID(String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
475
<DD>Set the doc id of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#setNodeData(java.lang.String)"><B>setNodeData(String)</B></A> -
477
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>
478
<DD>Set the node data to the given string
479
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setNodeID(long)"><B>setNodeID(long)</B></A> -
480
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
481
<DD>Set the id of this node
482
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setNodeIndex(int)"><B>setNodeIndex(int)</B></A> -
483
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
484
<DD>Set the node index of this node
485
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setNodeType(java.lang.String)"><B>setNodeType(String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
487
<DD>Set the type of this node
488
<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setParentID(long)"><B>setParentID(long)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
490
<DD>Set the parent id of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setRootNodeID(long)"><B>setRootNodeID(long)</B></A> -
492
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
493
<DD>Set the root node id of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/BasicNode.html#setTagName(java.lang.String)"><B>setTagName(String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/BasicNode.html">BasicNode</A>
496
<DD>Set the name of this node
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#setTitle(java.lang.String)"><B>setTitle(String)</B></A> -
498
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
499
<DD>Set the document title
500
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html#setTitleFromChildElement()"><B>setTitleFromChildElement()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXDocument.html">DBSAXDocument</A>
502
<DD>Look up the title of the first child element named "title"
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 and record it as the document title
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startCDATA()"><B>startCDATA()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
506
<DD>SAX Handler that receives notification of the start of CDATA sections
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startDocument()"><B>startDocument()</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
509
<DD>SAX Handler that receives notification of beginning of the document
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startDTD(java.lang.String, java.lang.String, java.lang.String)"><B>startDTD(String, String, String)</B></A> -
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Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that receives notification of DOCTYPE.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startElement(java.lang.String, java.lang.String, java.lang.String, org.xml.sax.Attributes)"><B>startElement(String, String, String, Attributes)</B></A> -
514
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
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<DD>SAX Handler that is called at the start of each XML element
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<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#startElement(java.lang.String, java.lang.String, java.lang.String, org.xml.sax.Attributes)"><B>startElement(String, String, String, Attributes)</B></A> -
517 182 jones
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
518
<DD>callback method used by the SAX Parser when the start tag of an
519
 element is detected.
520 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#startEntity(java.lang.String)"><B>startEntity(String)</B></A> -
521
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
522
<DD>SAX Handler that receives notification of the start of entities
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</DL>
524
<HR>
525
<A NAME="_T_"><!-- --></A><H2>
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<B>T</B></H2>
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<DL>
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<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html"><B>TextNode</B></A> - class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>.<DD>A Class that represents an XML Text node and its contents,<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#TextNode(long, long, java.lang.String, java.lang.String)"><B>TextNode(long, long, String, String)</B></A> -
529 138 jones
Constructor for class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>
530
<DD>Construct a new TextNode instance
531
<DT><A HREF="edu/ucsb/nceas/metacat/TextNode.html#toString()"><B>toString()</B></A> -
532
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/TextNode.html">TextNode</A>
533
<DD>String representation of this text node
534
<DT><A HREF="edu/ucsb/nceas/metacat/ElementNode.html#toString()"><B>toString()</B></A> -
535
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/ElementNode.html">ElementNode</A>
536 31 jones
<DD>String representation for display purposes (recursively descends through
537
 children to create an XML subtree)
538 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html#toString()"><B>toString()</B></A> -
539
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/QuerySpecification.html">QuerySpecification</A>
540
<DD>create a String description of the query that this instance represents.
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<DT><A HREF="edu/ucsb/nceas/metacat/DBTransform.html#transformXMLDocument(java.lang.String, java.lang.String, java.lang.String, java.io.PrintWriter)"><B>transformXMLDocument(String, String, String, PrintWriter)</B></A> -
542
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBTransform.html">DBTransform</A>
543
<DD>Transform an XML document using the stylesheet reference from the db
544 31 jones
</DL>
545
<HR>
546 107 jones
<A NAME="_U_"><!-- --></A><H2>
547
<B>U</B></H2>
548
<DL>
549
<DT><A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html#unparsedEntityDecl(java.lang.String, java.lang.String, java.lang.String, java.lang.String)"><B>unparsedEntityDecl(String, String, String, String)</B></A> -
550
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBDTDHandler.html">DBDTDHandler</A>
551 138 jones
<DD>All are reported after startDocument and before first
552
 startElement event
553 107 jones
</DL>
554
<HR>
555
<A NAME="_V_"><!-- --></A><H2>
556
<B>V</B></H2>
557
<DL>
558 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#validate(java.lang.String)"><B>validate(String)</B></A> -
559
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>
560
<DD>validate an xml document against its DTD
561
<DT><A HREF="edu/ucsb/nceas/metacat/DBValidate.html#validateString(java.lang.String)"><B>validateString(String)</B></A> -
562
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBValidate.html">DBValidate</A>
563
<DD>validate an xml document against its DTD
564 107 jones
</DL>
565
<HR>
566 31 jones
<A NAME="_W_"><!-- --></A><H2>
567
<B>W</B></H2>
568
<DL>
569 205 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html#warning(org.xml.sax.SAXParseException)"><B>warning(SAXParseException)</B></A> -
570
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXHandler.html">DBSAXHandler</A>
571
<DD>SAX Handler that receives notification of warnings
572
<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#write(java.io.Reader, java.lang.String, java.lang.String)"><B>write(Reader, String, String)</B></A> -
573
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
574
<DD>Insert XML stream to the database
575
<DT><A HREF="edu/ucsb/nceas/metacat/DBWriter.html#write(java.lang.String, java.lang.String, java.lang.String)"><B>write(String, String, String)</B></A> -
576
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBWriter.html">DBWriter</A>
577
<DD>Insert an XML file to the database
578 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeChildNodeToDB(java.lang.String, java.lang.String, java.lang.String)"><B>writeChildNodeToDB(String, String, String)</B></A> -
579
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
580
<DD>creates SQL code and inserts new node into DB connection
581 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeDocID(java.lang.String)"><B>writeDocID(String)</B></A> -
582
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
583
<DD>creates SQL code to put doc ID for the document node and for
584
 comment/PI nodes under document node into DB connection
585 138 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeNodename(java.lang.String)"><B>writeNodename(String)</B></A> -
586
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
587
<DD>creates SQL code to put nodename for the document node
588
 into DB connection
589 182 jones
<DT><A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html#writeRootNodeID(long)"><B>writeRootNodeID(long)</B></A> -
590
Method in class edu.ucsb.nceas.metacat.<A HREF="edu/ucsb/nceas/metacat/DBSAXNode.html">DBSAXNode</A>
591
<DD>creates SQL code to put root node id for the document node
592
 into DB connection
593 31 jones
</DL>
594
<HR>
595 205 jones
<A HREF="#_A_">A</A> <A HREF="#_B_">B</A> <A HREF="#_C_">C</A> <A HREF="#_D_">D</A> <A HREF="#_E_">E</A> <A HREF="#_F_">F</A> <A HREF="#_G_">G</A> <A HREF="#_I_">I</A> <A HREF="#_M_">M</A> <A HREF="#_N_">N</A> <A HREF="#_O_">O</A> <A HREF="#_P_">P</A> <A HREF="#_Q_">Q</A> <A HREF="#_R_">R</A> <A HREF="#_S_">S</A> <A HREF="#_T_">T</A> <A HREF="#_U_">U</A> <A HREF="#_V_">V</A> <A HREF="#_W_">W</A>
596 31 jones
<!-- ========== START OF NAVBAR ========== -->
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<A NAME="navbar_bottom"><!-- --></A>
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<TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0">
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<TR>
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<A NAME="navbar_bottom_firstrow"><!-- --></A>
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<TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3">
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  <TR ALIGN="center" VALIGN="top">
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  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <FONT CLASS="NavBarFont1">Package</FONT>&nbsp;</TD>
605 31 jones
  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <FONT CLASS="NavBarFont1">Class</FONT>&nbsp;</TD>
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  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <FONT CLASS="NavBarFont1">Use</FONT>&nbsp;</TD>
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  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="edu/ucsb/nceas/metacat/package-tree.html"><FONT ID="NavBarFont1"><B>Tree</B></FONT></A>&nbsp;</TD>
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  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="deprecated-list.html"><FONT ID="NavBarFont1"><B>Deprecated</B></FONT></A>&nbsp;</TD>
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  <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> &nbsp;<FONT CLASS="NavBarFont1Rev"><B>Index</B></FONT>&nbsp;</TD>
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  <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1">    <A HREF="help-doc.html"><FONT ID="NavBarFont1"><B>Help</B></FONT></A>&nbsp;</TD>
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</TABLE>
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</TD>
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<TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>
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</EM>
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<TR>
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<TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2">
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&nbsp;PREV&nbsp;
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624
  <A HREF="index.html" TARGET="_top"><B>FRAMES</B></A>  &nbsp;
625
&nbsp;<A HREF="index-all.html" TARGET="_top"><B>NO FRAMES</B></A></FONT></TD>
626
</TR>
627
</TABLE>
628
<!-- =========== END OF NAVBAR =========== -->
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<HR>
631 138 jones
<i>Copyright ? 2000 National Center for Ecological Analysis and Synthesis. All Rights Reserved.</i>
632 31 jones
</BODY>
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</HTML>