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Revision 3696

Added by Jing Tao about 16 years ago

Add method to handle origianl data file error in IPCC eml document

View differences:

test/edu/ucsb/nceas/metacattest/UploadIPCCDataTest.java
91 91 
	  }
92 92
93 93 
	  /**Constants*/
94 
	  private static String SRBDATAFILEDIR = "/home/tao/data-file"; // Dir for storing srb data file
94 
	  private static String SRBDATAFILEDIR = "/home/tao/data-file/IPCC"; // Dir for storing srb data file
95 95 
	  private static String DOCLISTFILE       = "docidList"; // File name which stores IPCC document id
96 96 
	  private static String METACATURL      = "http://chico.dyndns.org/knb/metacat";
97 
	  private static String USERNAME          = "uid=tao,o=NCEAS,dc=ecoinformatics,dc=org";
97 
	  private static String USERNAME          = "uid=dpennington,o=LTER,dc=ecoinformatics,dc=org";
98 98 
	  private static String PASSWORD           = "password";
99 99 
	  private static String TABLEONLINEURL= "/eml:eml/dataset/dataTable/physical/distribution/online/url";
100 100 
	  private static String SPATIALONLINEURL = "/eml:eml/dataset/spatialRaster/physical/distribution/online/url";
......
128 128 
	  public static Test suite()
129 129 
	  {
130 130 
		   TestSuite suite = new TestSuite();
131 
		   //suite.addTest(new UploadIPCCDataTest("upload"));
132 
		   //suite.addTest(new UploadIPCCDataTest("getCurrent_CorrectFileNamesPair"));
131 
		   //suite.addTest(new UploadIPCCDataTest("modifyEMLDocsWithCorrectDataFileName"));
132 
		   //suite.addTest(new UploadIPCCDataTest("modifyEMLDocsWithIncorrectDataFileName"));
133 133 
		    return suite;
134 134 
	 }
135 135
136 136 
	  /**
137 
	   * Modify EML Docs' data url online from SRB to ecogrid.
138 
	   *Those eml docs pointe valide srb file names.
139 
	   */
140 
	  public void modifyEMLDocsWithCorrectDataFileName()
141 
	  {
142 
		  boolean originalDataFileIncorrect = false;
143 
		  updateEML(originalDataFileIncorrect);
144 
	  }
145 
	  /**
146 
	   * Modify EML Docs' data url online from SRB to ecogrid.
147 
	   *Those eml docs pointe invalide srb file names.
148 
	   */
149 
	  public void modifyEMLDocsWithIncorrectDataFileName()
150 
	  {
151 
		  boolean originalDataFileIncorrect = true;
152 
		  updateEML(originalDataFileIncorrect);
153 
	  }
154 
	  /*
137 155 
	   * Upload the data file to Metacat and modify the eml documents
138 156 
	   * @return
139 157 
	   * @throws Exception
140 158 
	   */
141 
	  public void upload()
159 
	  private void updateEML(boolean originalDataFileIncorrect)
142 160 
	  {
143 161
144 162 
		      // Get eml document first
......
163 181 
            		   try
164 182 
            		   {
165 183 
            			   docid = (String)list.elementAt(i);
166 
            			   String dataId = handleSingleEML(docid);
184 
            			   String dataId = handleSingleEML(docid, originalDataFileIncorrect);
167 185 
            			   String message = "Successfully update eml "+docid + " with data id "+dataId;
168 186 
            			   writeLog(log, message);
169 187 
            		   }
......
197 215 
	   * 7. Update it to a new version in Metacat.
198 216 
	   *
199 217 
	   */
200 
	  private String handleSingleEML(String docid) throws Exception
218 
	  private String handleSingleEML(String docid,boolean originalDataFileIncorrect) throws Exception
201 219 
	  {
202 220 
		  Metacat metacat = MetacatFactory.createMetacatConnection(METACATURL);
203 221 
		  // login metacat
......
217 235
218 236 
          //3. Find the srb data file
219 237 
          String dataFileName = getDataFileNameFromURL(onlineUrl);
238 
          //System.out.println("the data fileName in eml "+dataFileName);
239 
          //If the dataFileName in original eml is wrong, we need to look up the
240 
          // the correct name first
241 
          if (originalDataFileIncorrect)
242 
          {
243 
        	  Hashtable correctName = getCurrent_CorrectFileNamesPair();
244 
        	  dataFileName =(String) correctName.get(dataFileName);
245 
          }
220 246 
          //System.out.println("=================The data file is "+dataFileName);
221 247 
          File dataFile = null;
222 248 
          dataFile = new File(SRBDATAFILEDIR,dataFileName);

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