Replace tomcatDir with deployDir
Use qualified properties
use the docid, not the filename when updating this node.fixes bug: http://bugzilla.ecoinformatics.org/show_bug.cgi?id=3260
include leading slash for path to the spatial files (context is given without a trailing slash)
Add support for separate LDAP and organization level configurations
Fix the db script suffix.
Add functionality to allow developer to bypass configuration utility
FIx comments for getContextDir to reflect that we no long append webapps to the path
Add sql debug statements
Use SystemUtil.getContextDir() instead of constructing directory path.
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