|
1
|
<!--
|
|
2
|
* '$RCSfile$'
|
|
3
|
* Purpose: web page describing the installation of Metacat
|
|
4
|
* Copyright: 2000 Regents of the University of California and the
|
|
5
|
* National Center for Ecological Analysis and Synthesis
|
|
6
|
* Authors: Chad Berkley
|
|
7
|
*
|
|
8
|
* '$Author: daigle $'
|
|
9
|
* '$Date: 2008-11-18 16:05:54 -0800 (Tue, 18 Nov 2008) $'
|
|
10
|
* '$Revision: 4575 $'
|
|
11
|
*
|
|
12
|
*
|
|
13
|
-->
|
|
14
|
|
|
15
|
<!DOCTYPE html PUBLIC "-//W3C//DTD html 4.0//EN">
|
|
16
|
<html>
|
|
17
|
|
|
18
|
<head>
|
|
19
|
<title>Metacat Installation Instructions</title>
|
|
20
|
<link rel="stylesheet" type="text/css" href="./common.css">
|
|
21
|
<link rel="stylesheet" type="text/css" href="./default.css">
|
|
22
|
</head>
|
|
23
|
|
|
24
|
<body>
|
|
25
|
|
|
26
|
<table class="tabledefault" width="100%">
|
|
27
|
<tr><td rowspan="2"><img src="./images/KNBLogo.gif"></td>
|
|
28
|
<td colspan="7">
|
|
29
|
<div class="title">Metacat UNIX Installation Instructions</div>
|
|
30
|
</td>
|
|
31
|
</tr>
|
|
32
|
<tr>
|
|
33
|
<td><a href="/" class="toollink"> KNB Home </a></td>
|
|
34
|
<td><a href="/data.html" class="toollink"> Data </a></td>
|
|
35
|
<td><a href="/people.html" class="toollink"> People </a></td>
|
|
36
|
<td><a href="/informatics" class="toollink"> Informatics </a></td>
|
|
37
|
<td><a href="/biodiversity" class="toollink"> Biocomplexity </a></td>
|
|
38
|
<td><a href="/education" class="toollink"> Education </a></td>
|
|
39
|
<td><a href="/software" class="toollink"> Software </a></td>
|
|
40
|
</tr>
|
|
41
|
</table>
|
|
42
|
<hr>
|
|
43
|
|
|
44
|
<div class="header1"><p class="emphasis">***Disclaimer***</p></div>
|
|
45
|
<p class="emphasis">
|
|
46
|
These installation instructions are meant for a systems administrator/DBA
|
|
47
|
or someone who is an advanced computer user. They are NOT meant for
|
|
48
|
the average computer user. Please realize that by executing these
|
|
49
|
instructions, you may have to trouble shoot many advanced issues yourself.
|
|
50
|
</p>
|
|
51
|
|
|
52
|
<div class="header1">Table of Contents</div>
|
|
53
|
<div class="toc">
|
|
54
|
<div class="toc1"><a href="#QuickInstructions">Quick Instructions</a></div>
|
|
55
|
<div class="toc2"><a href="#QuickInstall">Quick Installation</a></div>
|
|
56
|
<div class="toc2"><a href="#QuickUpdate">Quick Update</a></div>
|
|
57
|
<div class="toc1"><a href="#SourceInstall">Installing From Source Code</a></div>
|
|
58
|
<div class="toc2"><a href="#WindowsXP">Windows XP</a></div>
|
|
59
|
<div class="toc2"><a href="#Ubuntu8.04">Ubuntu 8.04</a></div>
|
|
60
|
<div class="toc2"><a href="#MacOSX">Mac OS X</a></div>
|
|
61
|
<div class="toc1"><a href="#PreInstallation">Pre-Installation</a></div>
|
|
62
|
<div class="toc2"><a href="#MinRequirements">Minimum Requirements</a></div>
|
|
63
|
<div class="toc2"><a href="#AdditionalRequiredSoftware">Additional Required Software</a></div>
|
|
64
|
<div class="toc1"><a href="#AdditionalSoftwareSetup">Additional Software Setup</a></div>
|
|
65
|
<div class="toc2"><a href="#AdditionalSoftwareJava">Java</a></div>
|
|
66
|
<div class="toc2"><a href="#AdditionalSoftwareOracle">Oracle</a></div>
|
|
67
|
<div class="toc2"><a href="#AdditionalSoftwarePostgres">PostgreSQL</a></div>
|
|
68
|
<div class="toc2"><a href="#AdditionalSoftwareAnt">Ant</a></div>
|
|
69
|
<div class="toc2"><a href="#AdditionalSoftwareTomcat">Tomcat</a></div>
|
|
70
|
<div class="toc1"><a href="#InstallingMetacat">Installing Metacat</a></div>
|
|
71
|
<div class="toc2"><a href="#InstallDownloadMetacat">Download Metacat Application</a></div>
|
|
72
|
<div class="toc2"><a href="#InstallMetacatWar">Install Metacat War</a></div>
|
|
73
|
<div class="toc2"><a href="#InstallRestartTomcat">Restart Tomcat</a></div>
|
|
74
|
<div class="toc2"><a href="#InstallTroubleshooting">Troubleshooting</a></div>
|
|
75
|
<div class="toc2"><a href="#InstallConfigureMetacat">Configure Metacat</a></div>
|
|
76
|
<div class="toc1"><a href="#UpgradingMetacat">Upgrading Existing Metacat</a></div>
|
|
77
|
<div class="toc2"><a href="#UpgradeStopMetacat">Stop the Running Metacat</a></div>
|
|
78
|
<div class="toc2"><a href="#UpgradeDownloadMetacat">Download Latest Metacat Application</a></div>
|
|
79
|
<div class="toc2"><a href="#UpgradeMetacatWar">Upgrade Metacat War</a></div>
|
|
80
|
<div class="toc2"><a href="#UpgradeRestartTomcat">Restart Tomcat</a></div>
|
|
81
|
<div class="toc2"><a href="#UpgradeTroubleshooting">Troubleshooting</a></div>
|
|
82
|
<div class="toc2"><a href="#UpgradeConfigureMetacat">Configure Metacat</a></div>
|
|
83
|
<div class="toc1"><a href="#Registry">Web Based Registry</a></div>
|
|
84
|
</div>
|
|
85
|
|
|
86
|
<a name="QuickInstructions"></a><div class="header1">Quick Instructions</div>
|
|
87
|
|
|
88
|
<a name="QuickInstall"></a><div class="header2">Quick Installation</div>
|
|
89
|
<p>These are the installation instructions for a system that has Ubuntu 8.04 installed
|
|
90
|
and has never had Metacat installed on it:</p>
|
|
91
|
|
|
92
|
<div class=indent>
|
|
93
|
<a name="DownloadMetacatInstall"></a><div class="header3">Download Metacat Package</div>
|
|
94
|
<p>Browse to the
|
|
95
|
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>.
|
|
96
|
In the Metacat section, select the link that looks like:</p>
|
|
97
|
<div class="code">metacat-bin-X.X.X.tar.gz</div>
|
|
98
|
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p>
|
|
99
|
<p>Extract the Metacat package files by typing:</p>
|
|
100
|
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div>
|
|
101
|
<p>You should see a war file and several supporting files. The location where these files
|
|
102
|
were extracted will be refered to as the the <metacat_package_dir> for the remainder
|
|
103
|
of this documentation.
|
|
104
|
</div>
|
|
105
|
|
|
106
|
<div class=indent>
|
|
107
|
<a name="CreateMetacatDirs"></a><div class="header3">Create Metacat Directories</div>
|
|
108
|
<p>Create the metacat utility base directory by typing:</p>
|
|
109
|
<div class="code">sudo mkdir /var/metacat</div>
|
|
110
|
<div class="code">sudo chown -R <tomcat_user> /var/metacat</div>
|
|
111
|
<p>where <tomcat_user> is the user that will start Tomcat. If you are
|
|
112
|
starting Tomcat as the root user, you do not need to run the chown command.</p>
|
|
113
|
</div>
|
|
114
|
|
|
115
|
<div class=indent>
|
|
116
|
<a name="InstallJava"></a><div class="header3">Install Java</div>
|
|
117
|
<p>Install Java by typing:</p>
|
|
118
|
<div class="code">sudo apt-get install sun-java5-jdk</div>
|
|
119
|
<p>hit "ok" then "yes" for license agreement<p>
|
|
120
|
</div>
|
|
121
|
|
|
122
|
<div class=indent>
|
|
123
|
<a name="InstallApache"></a><div class="header3">Install Apache</div>
|
|
124
|
<p>Install Apache and and Mod JK packages by typing:</p>
|
|
125
|
<div class="code">sudo apt-get install apache2</div>
|
|
126
|
<div class="code">sudo apt-get install libapache2-mod-jk</div>
|
|
127
|
<p>Setup Mod JK apache configuration by typing:</p>
|
|
128
|
<div class="code">sudo cp <metacat_package_dir>/jk.conf /etc/apache2/mods-available</div>
|
|
129
|
<div class="code">sudo cp <metacat_package_dir>/workers.properties /etc/apache2</div>
|
|
130
|
<p>Enable Apache Mod JK by typing:</p>
|
|
131
|
<div class="code">sudo a2dismod jk</div>
|
|
132
|
<div class="code">sudo a2enmod jk</div>
|
|
133
|
<p>Set up and enable knb (Metacat) site configurations by typing:</p>
|
|
134
|
<div class="code">sudo cp <metacat_package_dir>/knb /etc/apache2/sites-available</div>
|
|
135
|
<div class="code">sudo a2ensite knb</div>
|
|
136
|
<p>If you want to run an LSID server along with the Metacat server, set up and enable the authority service site
|
|
137
|
configurations by typing:</p>
|
|
138
|
<div class="code">sudo cp <metacat_package_dir>/authority /etc/apache2/sites-available</div>
|
|
139
|
<div class="code">sudo a2ensite authority</div>
|
|
140
|
<p>Restart apache to bring in changes by typing:</p>
|
|
141
|
<div class="code">sudo /etc/init.d/apache2 force-reload</div>
|
|
142
|
</div>
|
|
143
|
|
|
144
|
<div class=indent>
|
|
145
|
<a name="InstallTomcat"></a><div class="header3">Install Tomcat</div>
|
|
146
|
<p>Install Tomcat 5.5 by typing:</p>
|
|
147
|
<div class="code">sudo sudo apt-get install tomcat5.5</div>
|
|
148
|
<p>Install Metacat friendly Tomcat startup script by typing:</p>
|
|
149
|
<div class="code">sudo /etc/init.d/tomcat5.5 stop</div>
|
|
150
|
<div class="code">sudo mv /etc/init.d/tomcat5.5 /etc/init.d/tomcat5.5.bak</div>
|
|
151
|
<div class="code">sudo cp <metacat_package_dir>/tomcat5.5 /etc/init.d/tomcat5.5</div>
|
|
152
|
<div class="code">sudo chmod +x /etc/init.d/tomcat5.5</div>
|
|
153
|
</p>
|
|
154
|
</div>
|
|
155
|
|
|
156
|
<div class=indent>
|
|
157
|
<a name="InstallPostgres"></a><div class="header3">Install PostgreSQL Database</div>
|
|
158
|
<p>Install PostgreSQL by typing:</p>
|
|
159
|
<div class="code">sudo apt-get install postgresql</div>
|
|
160
|
<p>Change to postgres user:</p>
|
|
161
|
<div class="code">sudo su - postgres</div>
|
|
162
|
<p>Setup empty Metacat database instance editing the postgreSQL configuration file:</p>
|
|
163
|
<div class="code">gedit /etc/postgresql/8.3/main/pg_hba.conf</div>
|
|
164
|
<p>and adding the following line:</p>
|
|
165
|
<div class="code">host metacat metacat 127.0.0.1 255.255.255.255 password</div>
|
|
166
|
<p>Save the file, then create the metacat instance:</p>
|
|
167
|
<div class="code">createdb metacat</div>
|
|
168
|
<p>Log into postgreSQL by typing:</p>
|
|
169
|
<div class="code">psql metacat</div>
|
|
170
|
<p>and create the metacat user by typing at the psql prompt:</p>
|
|
171
|
<div class="code">CREATE USER metacat WITH UNENCRYPTED PASSWORD 'your_password';</div>
|
|
172
|
<p>where your_password is whatever password you would like for the metacat user.</p>
|
|
173
|
<p>Exit PostgreSQL by typing</p>
|
|
174
|
<div class="code">\q</div>
|
|
175
|
<p>Restart the PostgreSQL database to bring in changes:</p>
|
|
176
|
<div class="code">/etc/init.d/postgresql-8.3 restart</div>
|
|
177
|
<p>Log out of the postgres user account by typing:</p>
|
|
178
|
<div class="code">logout</div>
|
|
179
|
<p>Test the installation and metacat account by typing:</p>
|
|
180
|
<div class="code">psql -U metacat -W -h localhost metacat</div>
|
|
181
|
<p>Log back out of postgreSQL:</p>
|
|
182
|
<div class="code">\q</div>
|
|
183
|
</div>
|
|
184
|
|
|
185
|
<div class=indent>
|
|
186
|
<a name="QuickInstallMetacatWar"></a><div class="header3">Install Metacat War</div>
|
|
187
|
<p>Copy the war file to Tomcat:</p>
|
|
188
|
<div class="code">sudo cp <metacat_package_dir>/knb.war /usr/share/tomcat5.5/webapps</div>
|
|
189
|
<p>Restart Tomcat:</p>
|
|
190
|
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div>
|
|
191
|
</div>
|
|
192
|
|
|
193
|
<div class=indent>
|
|
194
|
<a name="QuickInstallLsidWar"></a><div class="header3">Install LSID War</div>
|
|
195
|
<p>If you want to run an LSID server along with the Metacat server, copy the
|
|
196
|
authority.war file to Tomcat:</p>
|
|
197
|
<div class="code">sudo cp <metacat_package_dir>/authority.war /usr/share/tomcat5.5/webapps</div>
|
|
198
|
<p>Restart Tomcat:</p>
|
|
199
|
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div>
|
|
200
|
</div>
|
|
201
|
|
|
202
|
<div class=indent>
|
|
203
|
<a name="ConfigureMetacatInstall"></a><div class="header3">Configure Metacat</div>
|
|
204
|
<p>Refer to the documentation on <a href="./metacatconfigure.html">Metacat Confguration</a>
|
|
205
|
to complete your installation of Metacat.</p>
|
|
206
|
</div>
|
|
207
|
|
|
208
|
<a name="QuickUpdate"></a><div class="header2">Quick Update</div>
|
|
209
|
<p>These are the instructions for a system that already has Metacat installed on it,
|
|
210
|
but needs a Metacat upgrade:</p>
|
|
211
|
|
|
212
|
<div class=indent>
|
|
213
|
<a name="DownloadMetacatUpdate"></a><div class="header3">Download Metacat Package</div>
|
|
214
|
<p>Browse to the
|
|
215
|
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>.
|
|
216
|
In the Metacat section, select the link that looks like:</p>
|
|
217
|
<div class="code">metacat-bin-X.X.X.tar.gz</div>
|
|
218
|
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p>
|
|
219
|
<p>Extract the Metacat package files by typing:</p>
|
|
220
|
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div>
|
|
221
|
<p>You should see a war file and several supporting files. The location where these files
|
|
222
|
were extracted will be refered to as the the <metacat_package_dir> for the remainder
|
|
223
|
of this documentation.
|
|
224
|
</div>
|
|
225
|
|
|
226
|
<div class=indent>
|
|
227
|
<a name="BackupApplication"></a><div class="header3">Backup Existing Metacat Installation</div>
|
|
228
|
<p>To be safe, it is best to backup the existing Metacat installation. Do so by typing: </p>
|
|
229
|
<div class="code">cp <web_app_dir>/knb <web_app_dir>/knb.bak</div>
|
|
230
|
<div class="code">cp <web_app_dir>/knb.war <web_app_dir>/knb.war.bak</div>
|
|
231
|
<p>Of course, you can use any backup strategy you like (or none at all).</p>
|
|
232
|
</div>
|
|
233
|
|
|
234
|
<div class=indent>
|
|
235
|
<a name="QuickUpdateMetacatWar"></a><div class="header3">Install Metacat War</div>
|
|
236
|
<p>Copy the war file to Tomcat:</p>
|
|
237
|
<div class="code">sudo cp knb.war /usr/share/tomcat5.5/webapps</div>
|
|
238
|
<p>Restart Tomcat:</p>
|
|
239
|
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div>
|
|
240
|
</div>
|
|
241
|
|
|
242
|
<div class=indent>
|
|
243
|
<a name="QuickUpdateLsidWar"></a><div class="header3">Update LSID War</div>
|
|
244
|
<p>If you want to run an LSID server along with the Metacat server, copy the
|
|
245
|
authority.war file to Tomcat:</p>
|
|
246
|
<div class="code">sudo cp <metacat_package_dir>/authority.war /usr/share/tomcat5.5/webapps</div>
|
|
247
|
<p>Restart Tomcat:</p>
|
|
248
|
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div>
|
|
249
|
</div>
|
|
250
|
|
|
251
|
<div class=indent>
|
|
252
|
<a name="ConfigureMetacatInstall"></a><div class="header3">Configure Metacat</div>
|
|
253
|
<p>Refer to the documentation on <a href="./metacatconfigure.html">Metacat Confguration</a>
|
|
254
|
to complete your installation of Metacat.</p>
|
|
255
|
</div>
|
|
256
|
|
|
257
|
<a name="SourceInstall"></a><div class="header1">Installing From Source Code</div>
|
|
258
|
<p>These documents are meant to outline the metacat installation process on specific platforms. They are
|
|
259
|
<strong><em>not</em></strong> a substitute for the below instructions and only meant as a supplemental guideline. </p>
|
|
260
|
<a name="WindowsXP"></a><div class="header2">Windows XP</div>
|
|
261
|
<p> See the <a href="os_specific/install_metacat_windows.html">Windows XP installation instructions</a>.</p>
|
|
262
|
<a name="Ubuntu8.04"></a><div class="header2">Ubuntu 8.04</div>
|
|
263
|
<p> See the <a href="os_specific/install_metacat_ubuntu.html">Ubuntu 8.04 installation instructions</a>.</p>
|
|
264
|
<a name="MacOSX"></a><div class="header2">Mac OS X</div>
|
|
265
|
<p> See the <a href="os_specific/install_metacat_mac.html">Mac OS X installation instructions</a>.</p>
|
|
266
|
|
|
267
|
<a name="PreInstallation"></a><div class="header1">Pre-Installation</div>
|
|
268
|
<a name="MinRequirements"></a><div class="header2">Minimum Requirements</div>
|
|
269
|
<p>
|
|
270
|
Installing Metacat requires a server running an SQL92 compliant database
|
|
271
|
(Oracle 8i or Postgresql recommended) with at least 128MB RAM, and a Pentium III class
|
|
272
|
processor or higher. The amount of disk space required depends on the
|
|
273
|
size of your RDBMS tablespace (which should be at least 10 MB,
|
|
274
|
however Metacat itself requires only about 1 MB of free space after
|
|
275
|
installation). These instructions assume a Linux environment but may
|
|
276
|
work on other UNIX type environments, however this has not been tested.
|
|
277
|
</p>
|
|
278
|
|
|
279
|
<a name="AdditionalRequiredSoftware"></a><div class="header2">Additional Required Software</div>
|
|
280
|
<p>
|
|
281
|
The server on which you wish to install Metacat must have the following
|
|
282
|
software installed and running correctly before attempting to install
|
|
283
|
Metacat.
|
|
284
|
<ul>
|
|
285
|
<li><a href="http://www.oracle.com">Oracle 8i</a> (or another SQL92
|
|
286
|
compliant RDBMS like Postgres)</li>
|
|
287
|
<li><a href="http://jakarta.apache.org/ant/index.html">Apache Jakarta-Ant</a>
|
|
288
|
</li>
|
|
289
|
<li><a href="http://jakarta.apache.org/tomcat/index.html">Apache Jakarta-Tomcat</a>
|
|
290
|
<p class="emphasis">Note: For a more robust web serving environment,
|
|
291
|
Apache web server should
|
|
292
|
be installed along with Tomcat and the two should be integrated
|
|
293
|
as described on the Apache web site.</p>
|
|
294
|
</li>
|
|
295
|
</ul>
|
|
296
|
</p>
|
|
297
|
|
|
298
|
<a name="AdditionalSoftwareSetup"></a><div class="header1">Additional Software Setup</div>
|
|
299
|
<a name="AdditionalSoftwareJava"></a><div class="header2">Java</div>
|
|
300
|
<p>You'll need a recent Java SDK; J2SE 1.4.2 or later is required. The latest metacat release
|
|
301
|
has been tested most extensively with <a href="http://java.sun.com/j2se/1.5.0/">J2SE 5.0</a>
|
|
302
|
and this is the recommended version.
|
|
303
|
Make sure that JAVA_HOME environment variable is properly set and that both
|
|
304
|
java and javac are on your PATH.
|
|
305
|
</p>
|
|
306
|
<a name="AdditionalSoftwareOracle"></a><div class="header2">Oracle 8i</div>
|
|
307
|
<p>The Oracle RDBMS must be installed and running as a daemon on the system.
|
|
308
|
In addition the JDBC listener must be enabled. You can enable it by
|
|
309
|
logging in as your Oracle user and typing the following:</p>
|
|
310
|
|
|
311
|
<div class="code">lsnrctl start</div>
|
|
312
|
|
|
313
|
<p>Your instance should have a table space of at least 5 MB (10 MB or higher
|
|
314
|
recommended). You should also have a username specific to Metacat
|
|
315
|
created and enabled. This user must have most normal permissions
|
|
316
|
including CREATE SESSION, CREATE TABLE, CREATE INDEX, CREATE TRIGGER,
|
|
317
|
EXECUTE PROCEDURE, EXECUTE TYPE, etc. If an action is unexplainably
|
|
318
|
rejected by Metacat it is probably because the user permissions are not
|
|
319
|
correctly set.</p>
|
|
320
|
|
|
321
|
<a name="AdditionalSoftwarePostgreSQL"></a><div class="header2">PostgreSQL</div>
|
|
322
|
<p>PostgreSQL can be easily installed on most linux distributions and on
|
|
323
|
Windows (using cygwin) and Mac OS X. Using Fedora Core or RedHat Linux,
|
|
324
|
you can install the rpms for postgres and then run </p>
|
|
325
|
|
|
326
|
<div class="code">/etc/init.d/postgresql start</div>
|
|
327
|
|
|
328
|
<p>in order to start the database.
|
|
329
|
On Ubuntu and other Debian-based Linux distributions, you can use the apt-get command
|
|
330
|
to install postgres: <code>sudo apt-get install postgresql-8.0</code> and
|
|
331
|
then run <code>/etc/init.d/postgresql-8.0 start</code> to start.
|
|
332
|
|
|
333
|
This initializes the data files. You need to do a bit of configuration
|
|
334
|
to create a database and set up a user account and allow internet access
|
|
335
|
via jdbc. See the postgres documentation for this, but here is a quick
|
|
336
|
start:
|
|
337
|
<ul>
|
|
338
|
<li>Switch to the "postgres" user account and edit "data/pg_hba.conf", adding the following line to the file:<br>
|
|
339
|
<code>host metacat metacat 127.0.0.1 255.255.255.255 password</code><br>
|
|
340
|
If your host uses IPv6 addresses, you may need this line instead:
|
|
341
|
<code>host metacat metacat ::1 ffff:ffff:ffff:ffff:ffff:ffff:ffff:ffff password</code></li>
|
|
342
|
<li>If you are using Postgresql pre-8.0, you must edit the "data/postgres.conf" file and uncomment and edit the line
|
|
343
|
starting with "tcpip_socket" so that it reads
|
|
344
|
<code>tcpip_socket = true</code></li>
|
|
345
|
<li>Run <code>createdb metacat</code> to create a new database</li>
|
|
346
|
<li>Run <code>psql metacat</code> to log in using the postgres account and create a new "metacat" user account
|
|
347
|
<ul>
|
|
348
|
<li>In postgres, run <code>CREATE USER metacat WITH UNENCRYPTED PASSWORD 'apasswordyoulike';</code></li>
|
|
349
|
<li>This creates a new account called metacat on the database named metacat</li>
|
|
350
|
<li>Note: there are many ways to do this, so others such as using
|
|
351
|
ENCRYPTED passwords will work fine.</li>
|
|
352
|
</ul>
|
|
353
|
</li>
|
|
354
|
<li>Exit the postgres account back to root and restart the postgres
|
|
355
|
database with <code>/etc/init.d/postgresql restart</code></li>
|
|
356
|
<li>Test logging into the postgres db using the metacat account with
|
|
357
|
the following command:
|
|
358
|
<code>psql -U metacat -W -h localhost metacat</code></li>
|
|
359
|
</ul>
|
|
360
|
</p>
|
|
361
|
|
|
362
|
<a name="AdditionalSoftwareAnt"></a><div class="header2">Ant</div>
|
|
363
|
<p>
|
|
364
|
Ant is a Java based build application similar to Make on UNIX systems.
|
|
365
|
It takes in installation parameters from a file in the root installation
|
|
366
|
directory named "build.xml". The Metacat CVS module contains a default
|
|
367
|
build.xml file that may require some modification upon installation. Ant
|
|
368
|
should be installed on the system and the "ant" executable shell script
|
|
369
|
should be available in the users path. The latest metacat release was tested with
|
|
370
|
Ant 1.6.5. <!-- We note that the current build is
|
|
371
|
not working with Ant 1.6.x, so you'll need to use an earler version. We have
|
|
372
|
successfully used Ant 1.5.1, 1.5.2, and some earlier versions. -->
|
|
373
|
</p>
|
|
374
|
|
|
375
|
<a name="AdditionalSoftwareTomcat"></a><div class="header2">Tomcat</div>
|
|
376
|
<p>
|
|
377
|
Install Tomcat into the directory of your choice. The directory in which
|
|
378
|
you install Tomcat itself will be referred to as the "$CATALINA_HOME".
|
|
379
|
We recommend that you install Tomcat version 5.5. More details about
|
|
380
|
Tomcat installation are available <a href=" http://jakarta.apache.org/tomcat/index.html">here</a>.
|
|
381
|
</p>
|
|
382
|
|
|
383
|
<a name="InstallingMetacat"></a><div class="header1">Installing Metacat</div>
|
|
384
|
<a name="protocol"></a>
|
|
385
|
<p>This section is only for a fresh installation. If you are upgrading an existing Metacat, please skip
|
|
386
|
this section and go to the next one - <a href="metacatinstall.html#Upgrade">Upgrading Existing Metacat</a>
|
|
387
|
|
|
388
|
<a name="InstallDownloadMetacat"></a><div class="header2">Download Metacat Application</div>
|
|
389
|
<p>Browse to the
|
|
390
|
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>.
|
|
391
|
In the Metacat section, select the link that looks like:</p>
|
|
392
|
<div class="code">metacat-bin-X.X.X.tar.gz</div>
|
|
393
|
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p>
|
|
394
|
<p>Extract the Metacat package files by typing:</p>
|
|
395
|
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div>
|
|
396
|
<p>You should see a war file and several supporting files. The location where these files
|
|
397
|
were extracted will be refered to as the the <metacat_package_dir> for the remainder
|
|
398
|
of this documentation.
|
|
399
|
|
|
400
|
<a name="InstallMetacatWar"></a><div class="header2">Install Metacat War</div>
|
|
401
|
<p>Copy the war file to Tomcat:</p>
|
|
402
|
<div class="code">sudo cp knb.war /usr/share/tomcat5.5/webapps</div>
|
|
403
|
<p>Restart Tomcat:</p>
|
|
404
|
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div>
|
|
405
|
|
|
406
|
<a name="InstallRestartTomcat"></a><div class="header2">Restart Tomcat</div>
|
|
407
|
<p>Once you have successfully installed Metacat, there is one more step. Tomcat
|
|
408
|
(and Apache if you have Tomcat integrated with it) must be restarted. To do
|
|
409
|
this, login as the user that runs your tomcat server (often "tomcat"),
|
|
410
|
go to $CATALINA_HOME/bin and type: </p>
|
|
411
|
|
|
412
|
<div class="code">./shutdown.sh</div>
|
|
413
|
<div class="code">./startup.sh</div>
|
|
414
|
|
|
415
|
<p>In the Tomcat startup messages you should see something in the log file like:</p>
|
|
416
|
|
|
417
|
<div class="code">Metacat: [WARN]: Metacat (1.9.0) initialized. [edu.ucsb.nceas.metacat.MetaCatServlet]</div>
|
|
418
|
|
|
419
|
<p>If you see that message Tomcat has successfully loaded the Metacat servlet.
|
|
420
|
Next, try to run your new servlet. Go to a web browser and type:</p>
|
|
421
|
|
|
422
|
<div class="code">http://yourserver.yourdomain.com/yourcontext/</div>
|
|
423
|
|
|
424
|
<p>You should substitute your context name for "yourcontext" in the url above.
|
|
425
|
If everything is working correctly, you should see a Metacat configuration screen. Note that if you do not have Tomcat integrated with
|
|
426
|
Apache you will probably have to type:</p>
|
|
427
|
|
|
428
|
<div class="code">http://yourserver.yourdomain.com:8080/yourcontext/</div>
|
|
429
|
|
|
430
|
<a name="InstallTroubleshooting"></a><div class="header2">Troubleshooting</div>
|
|
431
|
<p>If you see something like:</p>
|
|
432
|
|
|
433
|
<div class="code">java.lang.InternalError: Can't connect to X11 window server using 'yourservanme:0.0' as the value of the DISPLAY variable.</div>
|
|
434
|
|
|
435
|
<p>You should add this line: </p>
|
|
436
|
|
|
437
|
<div class="code">JAVA_OPTS="-Djava.awt.headless=true $JAVA_OPTS"</div>
|
|
438
|
|
|
439
|
<p>at the first line of the catalina.sh file in tomcat bin directory. The reason is that
|
|
440
|
GeoServer uses X11 windows to draw graphics.</p>
|
|
441
|
|
|
442
|
<a name="InstallConfigureMetacat"></a><div class="header2">Configure Metacat</div>
|
|
443
|
<p>Once you see the Metacat configuration screen, you can follow the instructions in the
|
|
444
|
<a href="./metacatconfigure.html"> Configuring Metacat Section</a>
|
|
445
|
to complete the internal configuration of Metacat.</p>
|
|
446
|
|
|
447
|
<a name="UpgradingMetacat"></a><div class="header1">Upgrading Existing Metacat</div>
|
|
448
|
<a name="protocol"></a>
|
|
449
|
<p>The following instructions are for upgrading an existing Metacat.
|
|
450
|
|
|
451
|
<a name="UpgradeStopMetacat"></a><div class="header2">Stop the Running Metacat</div>
|
|
452
|
<p>To do this, login as the user that runs your tomcat server (often "tomcat"),
|
|
453
|
go to $CATALINA_HOME/bin and type:</p>
|
|
454
|
|
|
455
|
<div class="code">./shutdown.sh</div>
|
|
456
|
|
|
457
|
<a name="UpgradeDownloadMetacat"></a><div class="header2">Download Latest Metacat Application</div>
|
|
458
|
<p>Browse to the
|
|
459
|
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>.
|
|
460
|
In the Metacat section, select the link that looks like:</p>
|
|
461
|
<div class="code">metacat-bin-X.X.X.tar.gz</div>
|
|
462
|
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p>
|
|
463
|
<p>Extract the Metacat package files by typing:</p>
|
|
464
|
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div>
|
|
465
|
<p>You should see a war file and several supporting files. The location where these files
|
|
466
|
were extracted will be refered to as the the <metacat_package_dir> for the remainder
|
|
467
|
of this documentation.</p>
|
|
468
|
|
|
469
|
<a name="UpgradeMetacatWar"></a><div class="header2">Upgrade Metacat War</div>
|
|
470
|
<p>Copy the war file to Tomcat:</p>
|
|
471
|
<div class="code">sudo cp knb.war /usr/share/tomcat5.5/webapps</div>
|
|
472
|
<p>Remove (or rename) the existing application directory:</p>
|
|
473
|
<div class="code">sudo rm -rf /usr/share/tomcat5.5/webapps/knb</div>
|
|
474
|
<p> or </p>
|
|
475
|
<div class="code">sudo mv /usr/share/tomcat5.5/webapps/knb /usr/share/tomcat5.5/webapps/knb.bak</div>
|
|
476
|
<p>Restart Tomcat:</p>
|
|
477
|
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div>
|
|
478
|
|
|
479
|
<a name="UpgradeRestartTomcat"></a><div class="header2">Restart Tomcat</div>
|
|
480
|
<p>Once you have successfully installed Metacat, there is one more step. Tomcat
|
|
481
|
(and Apache if you have Tomcat integrated with it) must be restarted. To do
|
|
482
|
this, login as the user that runs your tomcat server (often "tomcat"),
|
|
483
|
go to $CATALINA_HOME/bin and type: </p>
|
|
484
|
|
|
485
|
<div class="code">./startup.sh</div>
|
|
486
|
|
|
487
|
<p>In the Tomcat startup messages you should see something in the log file like:</p>
|
|
488
|
|
|
489
|
<div class="code">Metacat: [WARN]: Metacat (1.8.0) initialized. [edu.ucsb.nceas.metacat.MetaCatServlet]</div>
|
|
490
|
|
|
491
|
If you see that message Tomcat has successfully loaded the Metacat servlet.
|
|
492
|
Next, try to run your new servlet. Go to a web browser and type:</p>
|
|
493
|
|
|
494
|
<div class="code">http://yourserver.yourdomain.com/yourcontext/</div>
|
|
495
|
|
|
496
|
<p>You should substitute your context name for "yourcontext" in the url above.
|
|
497
|
If everything is working correctly, you should see a query page followed
|
|
498
|
by an empty result set. Note that if you do not have Tomcat integrated with
|
|
499
|
Apache you will probably have to type</p>
|
|
500
|
|
|
501
|
<div class="code">http://yourserver.yourdomain.com:8080/yourcontext/</div>
|
|
502
|
|
|
503
|
<a name="UpgradeTroubleshooting"></a><div class="header2">Troubleshooting</div>
|
|
504
|
<p>If you see something like:
|
|
505
|
|
|
506
|
<div class="code">java.lang.InternalError: Can't connect to X11 window server using 'yourservanme:0.0' as the value of the DISPLAY variable.</div>
|
|
507
|
|
|
508
|
<p>You should add this line: </p>
|
|
509
|
|
|
510
|
<div class="code">JAVA_OPTS="-Djava.awt.headless=true $JAVA_OPTS"</div>
|
|
511
|
<p>at the first line of the catalina.sh file in the tomcat bin directory. The reason is that
|
|
512
|
GeoServer uses X11 windows to draw graphics.</p>
|
|
513
|
|
|
514
|
<a name="UpgradeConfigureMetacat"></a><div class="header2">Configure Metacat</div>
|
|
515
|
<p>Once you see the Metacat configuration screen, you can follow the instructions in the
|
|
516
|
<a href="./metacatconfigure.html"> Configuring Metacat Section</a>
|
|
517
|
to complete the internal configuration of Metacat.</p>
|
|
518
|
|
|
519
|
<a name="Registry"></a><div class="header1">Web Based Registry</div>
|
|
520
|
<p>The registry allows users to upload simple metadata documents directly from the web. See the separate
|
|
521
|
<a href="registry_installation.html">Registry Installation Guide</a>.</p><br/><br/>
|
|
522
|
</body>
|
|
523
|
</html>
|
