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<!-- 
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  *   '$RCSfile$'
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  *     Purpose: web page describing the installation of Metacat
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  *   Copyright: 2008 Regents of the University of California and the
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  *               National Center for Ecological Analysis and Synthesis
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  *     Authors: Chad Berkley
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  *
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  *    '$Author: daigle $'
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  *    '$Date: 2008-11-19 16:48:24 -0800 (Wed, 19 Nov 2008) $'
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  *    '$Revision: 4597 $'
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  *
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  *
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  -->
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<!DOCTYPE html PUBLIC "-//W3C//DTD html 4.0//EN">
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<html>
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<head>
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  <title>Metacat Configuration Instructions</title>
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  <link rel="stylesheet" type="text/css" href="./common.css">
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  <link rel="stylesheet" type="text/css" href="./default.css">
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</head>
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<body>
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<table class="tabledefault" width="100%">
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<tr><td rowspan="2"><img src="./images/KNBLogo.gif"></td>
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<td colspan="7">
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<div class="title">Metacat Configuration</div>
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</td>
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</tr>
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<tr>
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  <td><a href="/" class="toollink"> KNB Home </a></td>
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  <td><a href="/data.html" class="toollink"> Data </a></td>
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  <td><a href="/people.html" class="toollink"> People </a></td>
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  <td><a href="/informatics" class="toollink"> Informatics </a></td>
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  <td><a href="/biodiversity" class="toollink"> Biocomplexity </a></td>
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  <td><a href="/education" class="toollink"> Education </a></td>
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  <td><a href="/software" class="toollink"> Software </a></td>
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</tr>
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</table>
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<hr>
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<div class="header1">Table of Contents</div>
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<div class="toc">
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  <div class="toc1"><a href="#InstallationIssues">Installation Issues</a></div>
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    <div class="toc2"><a href="#Issue1">Issue 1</a></div> 
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    <div class="toc2"><a href="#Issue2">Issue 2</a></div>
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  <div class="toc1"><a href="#StartupIssues">Startup Issues</a></div>
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    <div class="toc2"><a href="#Jdk14Logger">Metacat doesn't start and Jdk14Logger exception</a></div> 
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  <div class="toc1"><a href="#ConfigurationIssues">Configuration Issues</a></div>
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  <div class="toc1"><a href="#GeneralApplicationIssues">General Application Issues</a></div>
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  <div class="toc1"><a href="#UnitTestingIssues">Unit Testing Issues</a></div>
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</div> 
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<a name="InstallationIssues"></a><div class="header1">Installation Issues</div>
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<a name="Issue1"></a><div class="header2">Issue 1</div>
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  <p>Issue 1 here</p>
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<a name="Issue2"></a><div class="header2">Issue 2</div>
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  <p>Issue 2 here</p>
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<a name="StartupIssues"></a><div class="header1">Startup Issues</div> 
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	<a name="Jdk14Logger"></a><div class="header2">Metacat doesn't start and Jdk14Logger exception</div>
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	<p>The symptoms are that the metacat service will not show up at all, even though Tomcat 
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      is serving, and the following error shows up in the tomcat log (catalina.log):</p>
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      <div class="code">org.apache.commons.logging.LogConfigurationException: User-specified log
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      class 'org.apache.commons.logging.impl.Jdk14Logger' cannot be found or is
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      not useable </div>
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      <p>This message typically occurs in the tomcat log (catalina.log) 
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      when Tomcat has been installed on an Ubuntu/Debian system using apt-get install.  
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      And the application is started using:
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        <div class="code">/etc/init.d/tomcat5.5 start</div>  
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      <p>The problem is that the standard startup scripts reference the 
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      common java service, jsvc.  Metacat will not run under jsvc.  The solutions are:
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      <ul>
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      <li>Download the <a href="http://knb.ecoinformatics.org/software/download.html">Metacat binary install package</a>
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       and replace your /etc/init.d/tomcat5.5 startup script with the one provided in the
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       package.</li>
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      <li>Run Tomcat from the Tomcat binary directory: <tomcat_home>/bin/startup.sh and 
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      <tomcat_home>/bin/shutdown.sh</li>
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      </ul>
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      </p>
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<a name="ConfigurationIssues"></a><div class="header1">Configuration Issues</div>
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<a name="GeneralApplicationIssues"></a><div class="header1">General Application Issues</div> 
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<a name="UnitTestingIssues"></a><div class="header1">Unit Testing Issues</div>
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