Revision 4668
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* '$RCSfile$' |
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* Purpose: web page describing the installation of Metacat |
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* Copyright: 2000 Regents of the University of California and the |
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* National Center for Ecological Analysis and Synthesis |
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* Authors: Chad Berkley |
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<!DOCTYPE html PUBLIC "-//W3C//DTD html 4.0//EN"> |
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<html> |
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<title>Metacat Installation Instructions</title> |
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<table class="tabledefault" width="100%"> |
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<tr><td rowspan="2"><img src="./images/KNBLogo.gif"></td> |
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<td colspan="7"> |
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<div class="title">Metacat UNIX Installation Instructions</div> |
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</td> |
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<tr> |
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<td><a href="/" class="toollink"> KNB Home </a></td> |
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<td><a href="/education" class="toollink"> Education </a></td> |
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<td><a href="/software" class="toollink"> Software </a></td> |
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</tr> |
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</table> |
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<hr> |
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<div class="header1">Table of Contents</div> |
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<div class="toc"> |
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<div class="toc1"><a href="#QuickInstructions">Quick Instructions</a></div> |
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<div class="toc2"><a href="#QuickInstall">Quick Installation</a></div> |
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<div class="toc2"><a href="#QuickUpdate">Quick Update</a></div> |
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<div class="toc1"><a href="#PreInstallation">Pre-Installation</a></div> |
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<div class="toc2"><a href="#MinRequirements">Minimum Requirements</a></div> |
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<div class="toc2"><a href="#AdditionalRequiredSoftware">Additional Required Software</a></div> |
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<div class="toc1"><a href="#AdditionalSoftwareSetup">Additional Software Setup</a></div> |
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<div class="toc2"><a href="#AdditionalSoftwareJava">Java</a></div> |
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<div class="toc2"><a href="#AdditionalSoftwareOracle">Oracle</a></div> |
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<div class="toc2"><a href="#AdditionalSoftwarePostgres">PostgreSQL</a></div> |
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<div class="toc2"><a href="#AdditionalSoftwareAnt">Ant</a></div> |
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<div class="toc2"><a href="#AdditionalSoftwareTomcat">Tomcat</a></div> |
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<div class="toc1"><a href="#DownloadingMetacat">Download Metacat and Get War File</a></div> |
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<div class="toc2"><a href="#DownloadMetacatBinary">Download Metacat Binary and Create War File</a></div> |
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<div class="toc2"><a href="#DownloadMetacatSource">Download Metacat Source and Create War File</a></div> |
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<div class="toc1"><a href="#InstallingMetacat">Installing Metacat</a></div> |
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<div class="toc2"><a href="#CreateMetacatDirs">Create Metacat Directories</a></div> |
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<div class="toc2"><a href="#InstallMetacatWar">Install Metacat War</a></div> |
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<div class="toc1"><a href="#UpgradingMetacat">Upgrading Existing Metacat</a></div> |
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<div class="toc2"><a href="#UpgradeStopMetacat">Stop the Running Metacat</a></div> |
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<div class="toc2"><a href="#UpgradeDownloadMetacat">Download Latest Metacat Application</a></div> |
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<div class="toc2"><a href="#UpgradeMetacatWar">Upgrade Metacat War</a></div> |
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<div class="toc1"><a href="#RestartTomcat">Restart Tomcat</a></div> |
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<div class="toc2"><a href="#UpgradeTroubleshooting">Troubleshooting</a></div> |
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<div class="toc2"><a href="#UpgradeConfigureMetacat">Configure Metacat</a></div> |
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<div class="toc1"><a href="#Registry">Web Based Registry</a></div> |
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<!-- |
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<div class="toc1"><a href="#VersionNotes">Version Installation Notes</a></div> |
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<div class="toc2"><a href="#1_9InstallNotes">1.9 Installation Notes</a></div> |
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--> |
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</div> |
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<a name="QuickInstructions"></a><div class="header1">Quick Instructions</div> |
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<a name="QuickInstall"></a><div class="header2">Quick Installation</div> |
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<p>These are the installation instructions for a system that has Ubuntu 8.04 installed |
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and has never had Metacat installed on it:</p> |
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<div class=indent> |
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<a name="DownloadMetacatInstall"></a><div class="header3">Download Metacat Package</div> |
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<p>Browse to the |
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<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
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In the Metacat section, select the link that looks like:</p> |
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<div class="code">metacat-bin-X.X.X.tar.gz</div> |
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<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p> |
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<p>Extract the Metacat package files by typing:</p> |
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<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div> |
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<p>You should see a war file and several supporting files. The location where these files |
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were extracted will be refered to as the the <metacat_package_dir> for the remainder |
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of this documentation. |
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</div> |
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<div class=indent> |
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<a name="CreateDirs"></a><div class="header3">Create Metacat Directories</div> |
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<p>Create the metacat utility base directory by typing:</p> |
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<div class="code">sudo mkdir /var/metacat</div> |
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<div class="code">sudo chown -R <tomcat_user> /var/metacat</div> |
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<p>where <tomcat_user> is the user that will start Tomcat. If you are |
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starting Tomcat as the root user, you do not need to run the chown command.</p> |
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</div> |
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<div class=indent> |
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<a name="InstallJava"></a><div class="header3">Install Java</div> |
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<p>Install Java by typing:</p> |
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<div class="code">sudo apt-get install sun-java5-jdk</div> |
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<p>hit "ok" then "yes" for license agreement<p> |
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</div> |
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<div class=indent> |
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<a name="InstallApache"></a><div class="header3">Install Apache</div> |
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<p>Install Apache and and Mod JK packages by typing:</p> |
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<div class="code">sudo apt-get install apache2 libapache2-mod-jk</div> |
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<p>Set up Mod JK apache configuration by typing:</p> |
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<div class="code">sudo cp <metacat_package_dir>/jk.conf /etc/apache2/mods-available</div> |
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<div class="code">sudo cp <metacat_package_dir>/workers.properties /etc/apache2</div> |
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<p>Enable Apache Mod JK by typing:</p> |
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<div class="code">sudo a2dismod jk</div> |
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<div class="code">sudo a2enmod jk</div> |
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<p>Set up and enable knb (Metacat) site configurations by typing:</p> |
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<div class="code">sudo cp <metacat_package_dir>/knb /etc/apache2/sites-available</div> |
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<div class="code">sudo a2ensite knb</div> |
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<p>If you want to run an LSID server along with the Metacat server, set up and enable the authority service site |
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configurations by typing:</p> |
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<div class="code">sudo cp <metacat_package_dir>/authority /etc/apache2/sites-available</div> |
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<div class="code">sudo a2ensite authority</div> |
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<p>Restart apache to bring in changes by typing:</p> |
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<div class="code">sudo /etc/init.d/apache2 force-reload</div> |
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</div> |
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<div class=indent> |
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<a name="InstallTomcat"></a><div class="header3">Install Tomcat</div> |
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<p>Install Tomcat 5.5 by typing:</p> |
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<div class="code">sudo sudo apt-get install tomcat5.5</div> |
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<p>Install Metacat friendly Tomcat startup script by typing:</p> |
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<div class="code">sudo /etc/init.d/tomcat5.5 stop</div> |
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<div class="code">sudo mv /etc/init.d/tomcat5.5 /etc/init.d/tomcat5.5.bak</div> |
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<div class="code">sudo cp <metacat_package_dir>/tomcat5.5 /etc/init.d/tomcat5.5</div> |
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<div class="code">sudo chmod +x /etc/init.d/tomcat5.5</div> |
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</p> |
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</div> |
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<div class=indent> |
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<a name="InstallPostgres"></a><div class="header3">Install PostgreSQL Database</div> |
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<p>Install PostgreSQL by typing:</p> |
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<div class="code">sudo apt-get install postgresql</div> |
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<p>Change to postgres user:</p> |
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<div class="code">sudo su - postgres</div> |
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<p>Setup empty Metacat database instance editing the postgreSQL configuration file:</p> |
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<div class="code">gedit /etc/postgresql/8.3/main/pg_hba.conf</div> |
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<p>and adding the following line:</p> |
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<div class="code">host metacat metacat 127.0.0.1 255.255.255.255 password</div> |
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<p>Save the file, then create the metacat instance:</p> |
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<div class="code">createdb metacat</div> |
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<p>Log into postgreSQL by typing:</p> |
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<div class="code">psql metacat</div> |
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<p>and create the metacat user by typing at the psql prompt:</p> |
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<div class="code">CREATE USER metacat WITH UNENCRYPTED PASSWORD 'your_password';</div> |
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<p>where your_password is whatever password you would like for the metacat user.</p> |
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<p>Exit PostgreSQL by typing</p> |
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<div class="code">\q</div> |
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<p>Restart the PostgreSQL database to bring in changes:</p> |
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<div class="code">/etc/init.d/postgresql-8.3 restart</div> |
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<p>Log out of the postgres user account by typing:</p> |
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<div class="code">logout</div> |
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<p>Test the installation and metacat account by typing:</p> |
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<div class="code">psql -U metacat -W -h localhost metacat</div> |
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<p>Log back out of postgreSQL:</p> |
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<div class="code">\q</div> |
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</div> |
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<div class=indent> |
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<a name="QuickInstallMetacatWar"></a><div class="header3">Install Metacat War</div> |
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<p>Copy the war file to Tomcat:</p> |
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<div class="code">sudo cp <metacat_package_dir>/knb.war /usr/share/tomcat5.5/webapps</div> |
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<p>Restart Tomcat:</p> |
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<div class="code">sudo /etc/init.d/tomcat5.5 restart</div> |
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</div> |
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<div class=indent> |
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<a name="QuickInstallLsidWar"></a><div class="header3">Install LSID War</div> |
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<p>If you want to run an LSID server along with the Metacat server, copy the |
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authority.war file to Tomcat:</p> |
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<div class="code">sudo cp <metacat_package_dir>/authority.war /usr/share/tomcat5.5/webapps</div> |
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<p>Restart Tomcat:</p> |
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<div class="code">sudo /etc/init.d/tomcat5.5 restart</div> |
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</div> |
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<div class=indent> |
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<a name="ConfigureMetacatInstall"></a><div class="header3">Configure Metacat</div> |
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<p>Refer to the documentation on <a href="./metacatconfigure.html">Metacat Confguration</a> |
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to complete your installation of Metacat.</p> |
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</div> |
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<a name="QuickUpdate"></a><div class="header2">Quick Update</div> |
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<p>These are the instructions for a system that already has Metacat installed on it, |
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but needs a Metacat upgrade:</p> |
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<div class=indent> |
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<a name="DownloadMetacatUpdate"></a><div class="header3">Download Metacat Package</div> |
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<p>Browse to the |
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<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
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In the Metacat section, select the link that looks like:</p> |
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<div class="code">metacat-bin-X.X.X.tar.gz</div> |
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<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p> |
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<p>Extract the Metacat package files by typing:</p> |
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<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div> |
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<p>You should see a war file and several supporting files. The location where these files |
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were extracted will be refered to as the the <metacat_package_dir> for the remainder |
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of this documentation. |
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</div> |
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<div class=indent> |
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<a name="BackupApplication"></a><div class="header3">Backup Existing Metacat Installation</div> |
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<p>To be safe, it is best to backup the existing Metacat installation. Do so by typing: </p> |
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<div class="code">cp <web_app_dir>/knb <web_app_dir>/knb.<yyyymmdd></div> |
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<div class="code">cp <web_app_dir>/knb.war <web_app_dir>/knb.war.<yyyymmdd></div> |
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<p>Of course, you can use any backup strategy you like (or none at all).</p> |
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</div> |
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<div class=indent> |
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<a name="QuickUpdateMetacatWar"></a><div class="header3">Install Metacat War</div> |
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<p>Copy the war file to Tomcat:</p> |
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<div class="code">sudo cp knb.war /usr/share/tomcat5.5/webapps</div> |
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<p>Restart Tomcat:</p> |
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<div class="code">sudo /etc/init.d/tomcat5.5 restart</div> |
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</div> |
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<div class=indent> |
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<a name="QuickUpdateLsidWar"></a><div class="header3">Update LSID War</div> |
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<p>If you want to run an LSID server along with the Metacat server, copy the |
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authority.war file to Tomcat:</p> |
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<div class="code">sudo cp <metacat_package_dir>/authority.war /usr/share/tomcat5.5/webapps</div> |
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<p>Restart Tomcat:</p> |
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<div class="code">sudo /etc/init.d/tomcat5.5 restart</div> |
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</div> |
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<div class=indent> |
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<a name="ConfigureMetacatInstall"></a><div class="header3">Configure Metacat</div> |
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<p>Refer to the documentation on <a href="./metacatconfigure.html">Metacat Confguration</a> |
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to complete your installation of Metacat.</p> |
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</div> |
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<!-- |
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<a name="SourceInstall"></a><div class="header1">Installing From Source Code</div> |
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<p>These documents are meant to outline the metacat installation process on specific platforms. They are |
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<strong><em>not</em></strong> a substitute for the below instructions and only meant as a supplemental guideline. </p> |
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<a name="WindowsXP"></a><div class="header2">Windows XP</div> |
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<p> See the <a href="os_specific/install_metacat_windows.html">Windows XP installation instructions</a>.</p> |
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<a name="Ubuntu8.04"></a><div class="header2">Ubuntu 8.04</div> |
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<p> See the <a href="os_specific/install_metacat_ubuntu.html">Ubuntu 8.04 installation instructions</a>.</p> |
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<a name="MacOSX"></a><div class="header2">Mac OS X</div> |
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<p> See the <a href="os_specific/install_metacat_mac.html">Mac OS X installation instructions</a>.</p> |
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--> |
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<a name="PreInstallation"></a><div class="header1">Pre-Installation</div> |
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<a name="MinRequirements"></a><div class="header2">Minimum Requirements</div> |
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<p> |
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Installing Metacat requires a server running an SQL92 compliant database |
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(Oracle 8i or Postgresql recommended) with at least 128MB RAM, and a Pentium III class |
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processor or higher. The amount of disk space required depends on the |
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size of your RDBMS tablespace (which should be at least 10 MB, |
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however Metacat itself requires only about 1 MB of free space after |
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installation). These instructions assume a Linux environment but may |
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work on other UNIX type environments, however this has not been tested. |
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</p> |
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<a name="AdditionalRequiredSoftware"></a><div class="header2">Additional Required Software</div> |
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<p> |
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The server on which you wish to install Metacat must have the following |
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software installed and running correctly before attempting to install |
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Metacat. |
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<ul> |
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<li><a href="http://www.oracle.com">Oracle 8i</a> (or another SQL92 |
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compliant RDBMS like Postgres)</li> |
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<li><a href="http://jakarta.apache.org/ant/index.html">Apache Jakarta-Ant</a> |
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</li> |
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<li><a href="http://jakarta.apache.org/tomcat/index.html">Apache Jakarta-Tomcat</a> |
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<p class="emphasis">Note: For a more robust web serving environment, |
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Apache web server should |
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be installed along with Tomcat and the two should be integrated |
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as described on the Apache web site.</p> |
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</li> |
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</ul> |
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</p> |
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<a name="AdditionalSoftwareSetup"></a><div class="header1">Additional Software Setup</div> |
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<a name="AdditionalSoftwareJava"></a><div class="header2">Java</div> |
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<p>You'll need a recent Java SDK; J2SE 1.4.2 or later is required. The latest metacat release |
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has been tested most extensively with <a href="http://java.sun.com/j2se/1.5.0/">J2SE 5.0</a> |
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and this is the recommended version. |
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Make sure that JAVA_HOME environment variable is properly set and that both |
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java and javac are on your PATH. |
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</p> |
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<a name="AdditionalSoftwareOracle"></a><div class="header2">Oracle 8i</div> |
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<p>The Oracle RDBMS must be installed and running as a daemon on the system. |
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In addition the JDBC listener must be enabled. You can enable it by |
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logging in as your Oracle user and typing the following:</p> |
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<div class="code">lsnrctl start</div> |
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<p>Your instance should have a table space of at least 5 MB (10 MB or higher |
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recommended). You should also have a username specific to Metacat |
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created and enabled. This user must have most normal permissions |
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including CREATE SESSION, CREATE TABLE, CREATE INDEX, CREATE TRIGGER, |
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EXECUTE PROCEDURE, EXECUTE TYPE, etc. If an action is unexplainably |
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rejected by Metacat it is probably because the user permissions are not |
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correctly set.</p> |
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|
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| 314 |
<a name="AdditionalSoftwarePostgreSQL"></a><div class="header2">PostgreSQL</div> |
|
| 315 |
<p>PostgreSQL can be easily installed on most linux distributions and on |
|
| 316 |
Windows (using cygwin) and Mac OS X. Using Fedora Core or RedHat Linux, |
|
| 317 |
you can install the rpms for postgres and then run </p> |
|
| 318 |
|
|
| 319 |
<div class="code">/etc/init.d/postgresql start</div> |
|
| 320 |
|
|
| 321 |
<p>in order to start the database. |
|
| 322 |
On Ubuntu and other Debian-based Linux distributions, you can use the apt-get command |
|
| 323 |
to install postgres: |
|
| 324 |
<div class="code">sudo apt-get install postgresql-8.0</div> and |
|
| 325 |
then run |
|
| 326 |
<div class="code">/etc/init.d/postgresql-8.0 start</div> to start. |
|
| 327 |
|
|
| 328 |
This initializes the data files. You need to do a bit of configuration |
|
| 329 |
to create a database and set up a user account and allow internet access |
|
| 330 |
via jdbc. See the postgres documentation for this, but here is a quick |
|
| 331 |
start: |
|
| 332 |
<ul> |
|
| 333 |
<li>Switch to the "postgres" user account |
|
| 334 |
<div class="code">sudo su - postgres</div></li> |
|
| 335 |
<li>Edit "data/pg_hba.conf", adding the following line to the file:<br> |
|
| 336 |
<div class="code">host metacat metacat 127.0.0.1 255.255.255.255 password</div> |
|
| 337 |
If your host uses IPv6 addresses, you may need this line instead: |
|
| 338 |
<div class="code">host metacat metacat ::1 ffff:ffff:ffff:ffff:ffff:ffff:ffff:ffff password</div></li> |
|
| 339 |
<li>If you are using Postgresql pre-8.0, you must edit the "data/postgres.conf" file and uncomment and edit the line |
|
| 340 |
starting with "tcpip_socket" so that it reads |
|
| 341 |
<div class="code">tcpip_socket = true</div></li> |
|
| 342 |
<li>Create metacat database by typing: |
|
| 343 |
<div class="code">createdb metacat</div></li> |
|
| 344 |
<li>Log in using the postgres account and create a new "metacat" user account by typing: |
|
| 345 |
<div class="code">psql metacat</div> |
|
| 346 |
<ul> |
|
| 347 |
<li>In postgres, run <div class="code">CREATE USER metacat WITH UNENCRYPTED PASSWORD 'apasswordyoulike';</div></li> |
|
| 348 |
<li>This creates a new account called metacat on the database named metacat</li> |
|
| 349 |
<li>Note: there are many ways to do this, so others such as using |
|
| 350 |
ENCRYPTED passwords will work fine.</li> |
|
| 351 |
</ul> |
|
| 352 |
</li> |
|
| 353 |
<li>Exit the postgres account back to root and restart the postgres |
|
| 354 |
database by typing: |
|
| 355 |
<div class="code">/etc/init.d/postgresql restart</div></li> |
|
| 356 |
<li>Test logging into the postgres db using the metacat account with |
|
| 357 |
the following command: |
|
| 358 |
<div class="code">psql -U metacat -W -h localhost metacat</div></li> |
|
| 359 |
</ul> |
|
| 360 |
</p> |
|
| 361 |
|
|
| 362 |
<a name="AdditionalSoftwareAnt"></a><div class="header2">Ant</div> |
|
| 363 |
<p> |
|
| 364 |
Ant is a Java based build application similar to Make on UNIX systems. |
|
| 365 |
It takes in installation parameters from a file in the root installation |
|
| 366 |
directory named "build.xml". The Metacat CVS module contains a default |
|
| 367 |
build.xml file that may require some modification upon installation. Ant |
|
| 368 |
should be installed on the system and the "ant" executable shell script |
|
| 369 |
should be available in the users path. The latest metacat release was tested with |
|
| 370 |
Ant 1.6.5. <!-- We note that the current build is |
|
| 371 |
not working with Ant 1.6.x, so you'll need to use an earler version. We have |
|
| 372 |
successfully used Ant 1.5.1, 1.5.2, and some earlier versions. --> |
|
| 373 |
</p> |
|
| 374 |
|
|
| 375 |
<a name="AdditionalSoftwareTomcat"></a><div class="header2">Tomcat</div> |
|
| 376 |
<p> |
|
| 377 |
Install Tomcat into the directory of your choice. The directory in which |
|
| 378 |
you install Tomcat itself will be referred to as the <tomcat_home>. |
|
| 379 |
We recommend that you install Tomcat version 5.5. If you are running |
|
| 380 |
Ubuntu/Debian, you can get Tomcat by typing:</p> |
|
| 381 |
<div class="code">sudo apt-get install tomcat5.5</div> |
|
| 382 |
Otherwise, you can get Tomcat from <a href=" http://jakarta.apache.org/tomcat/index.html">the Apache Tomcat page</a>. |
|
| 383 |
</p> |
|
| 384 |
|
|
| 385 |
<a name="DownloadingMetacat"></a><div class="header1">Download Metacat and Get War File</div> |
|
| 386 |
<p>There are several ways to wind up with a Metacat war file, which is needed for |
|
| 387 |
installation. These are: </p> |
|
| 388 |
<ul> |
|
| 389 |
<li>Download Metacat binary distribution - which will have a pre-built war file.</li> |
|
| 390 |
<li>Download Metacat source distribution - which will then need to be built in order to create a war file.</li> |
|
| 391 |
<li>Download Metacat source from SVN - which will then need to be built in order to create a war file.</li> |
|
| 392 |
</ul> |
|
| 393 |
<p>Since downloading the binary distribution is the easiest and most common install, it |
|
| 394 |
will be discussed here in detail. Links to source download/build instructions are also |
|
| 395 |
included in case you would like to go that route.</p> |
|
| 396 |
<a name="DownloadMetacatBinary"></a><div class="header2">Download Metacat Binary and Create War File</div> |
|
| 397 |
|
|
| 398 |
<p>Browse to the |
|
| 399 |
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
|
| 400 |
In the Metacat section, for Linux based systems, select the link that looks like:</p> |
|
| 401 |
<div class="code">metacat-bin-X.X.X.tar.gz</div> |
|
| 402 |
<p>for Windows systems, select the link that looks like:</p> |
|
| 403 |
<div class="code">metacat-bin-X.X.X.zip</div> |
|
| 404 |
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p> |
|
| 405 |
<p>Extract the Metacat package files on Linux systems by typing: |
|
| 406 |
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div> |
|
| 407 |
<p>or, on Windows, use your system unzip utility to extract the zip file.</p> |
|
| 408 |
<p>You should see a war file and several supporting files. The location where these files |
|
| 409 |
were extracted will be refered to as the the <metacat_package_dir> for the remainder |
|
| 410 |
of this documentation. |
|
| 411 |
|
|
| 412 |
<a name="DownloadMetacatSource"></a><div class="header2">Download Metacat Source and Create War File</div> |
|
| 413 |
|
|
| 414 |
<p>If you would like to download the Metacat source distribution or checkout the source |
|
| 415 |
code from SVN, go to the |
|
| 416 |
<a href="./metacat-source-build.html">Download and Build Metacat From Source</a> page. |
|
| 417 |
|
|
| 418 |
<a name="InstallingMetacat"></a><div class="header1">Installing Metacat</div> |
|
| 419 |
<p>This section is only for a new installation. If you are upgrading an existing Metacat, please skip |
|
| 420 |
this section and go to the next one - <a href="#UpgradingMetacat">Upgrading Existing Metacat</a></p> |
|
| 421 |
|
|
| 422 |
<p>Tomcat will look for it's application files (war files) in a configured directory. |
|
| 423 |
This is typically the <tomcat_home>/webapps directory, but your instance of Tomcat may |
|
| 424 |
be configured to look in a different directory. We will refer to your Tomcat application directory |
|
| 425 |
as <tomcat_app_dir>.</p> |
|
| 426 |
|
|
| 427 |
<a name="CreateMetacatDirs"></a><div class="header2">Create Metacat Directories</div> |
|
| 428 |
<p>Metacat uses a base directory to store such things as store data and metadata, |
|
| 429 |
temporary files and configuration backups. This directory should be outside of the |
|
| 430 |
Tomcat application directory since the application directory gets wiped out during an |
|
| 431 |
upgrade. Create the metacat utility base directory |
|
| 432 |
by typing:</p> |
|
| 433 |
<div class="code">sudo mkdir <metacat_base_dir></div> |
|
| 434 |
<p>(Typically <metacat_base_dir> is '/var/metacat'.) Remeber the directory you |
|
| 435 |
choose, since you will be asked to configure Metacat to point to it after startup.</p> |
|
| 436 |
|
|
| 437 |
<p>Change the ownership of the directory by typing:</p> |
|
| 438 |
<div class="code">sudo chown -R <tomcat_user> /var/metacat</div> |
|
| 439 |
<p>where <tomcat_user> is the user that will start Tomcat. If you are |
|
| 440 |
starting Tomcat as the root user, you do not need to run the chown command.</p> |
|
| 441 |
|
|
| 442 |
<a name="InstallMetacatWar"></a><div class="header2">Install Metacat War</div> |
|
| 443 |
<p>Copy the war file to Tomcat:</p> |
|
| 444 |
<div class="code">sudo cp knb.war <tomcat_app_dir></div> |
|
| 445 |
|
|
| 446 |
<a name="ApacheConfig"></a><div class="header2">Configure Apache</div> |
|
| 447 |
<p>You have the option of running Tomcat stand-alone or with with the Apache web |
|
| 448 |
server. Running with Apache is the more traditional setup since Apache is a |
|
| 449 |
more robust web server. There are some initial setup steps to get Apache talking |
|
| 450 |
to the Metacat application at the </p> |
|
| 451 |
<a href="./metacat-apache-config.html"> the Metacat Apache Configuration page</a></p> |
|
| 452 |
|
|
| 453 |
<a name="UpgradingMetacat"></a><div class="header1">Upgrading Existing Metacat</div> |
|
| 454 |
<a name="protocol"></a> |
|
| 455 |
<p>The following instructions are for upgrading an existing Metacat. |
|
| 456 |
|
|
| 457 |
<a name="UpgradeStopMetacat"></a><div class="header2">Stop the Running Metacat</div> |
|
| 458 |
<p>To do this, login as the user that runs your tomcat server (often "tomcat"), |
|
| 459 |
go to <tomcat_home>/bin and type:</p> |
|
| 460 |
|
|
| 461 |
<div class="code">./shutdown.sh</div> |
|
| 462 |
|
|
| 463 |
<a name="UpgradeDownloadMetacat"></a><div class="header2">Download Latest Metacat Application</div> |
|
| 464 |
<p>Browse to the |
|
| 465 |
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
|
| 466 |
In the Metacat section, select the link that looks like:</p> |
|
| 467 |
<div class="code">metacat-bin-X.X.X.tar.gz</div> |
|
| 468 |
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p> |
|
| 469 |
<p>Extract the Metacat package files by typing:</p> |
|
| 470 |
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div> |
|
| 471 |
<p>You should see several files:</p> |
|
| 472 |
|
|
| 473 |
<ul> |
|
| 474 |
<li>knb.war - the Metacat application web archive file.</li> |
|
| 475 |
<li>knb - the web definition file used by Apache on ubuntu/debian Linux systems.</li> |
|
| 476 |
<li>jk.conf - the JkMount configuration file used by Apache on ubuntu/debian Linux systems.</li> |
|
| 477 |
<li>workers.properties - the workers definition file used by Apache on ubuntu/debian Linux systems.</li> |
|
| 478 |
<li>tomcat5.5 - the Tomcat startup script for Tomcat 5.5 installed with apt-get on ubuntu/debian Linux systems.</li> |
|
| 479 |
<li>authority - the optional LSID Server application web archive file.</li> |
|
| 480 |
</ul> |
|
| 481 |
|
|
| 482 |
<p>The location where these files |
|
| 483 |
were extracted will be refered to as the the <metacat_package_dir> for the remainder |
|
| 484 |
of this documentation.</p> |
|
| 485 |
|
|
| 486 |
<a name="UpgradeMetacatWar"></a><div class="header2">Upgrade Metacat War</div> |
|
| 487 |
<p>Tomcat will look for it's application files (war files) in a configured directory. |
|
| 488 |
This is typically the <tomcat_home>/webapps directory, but your instance of Tomcat may |
|
| 489 |
be configured to look in a different directory. We will refer to your Tomcat application directory |
|
| 490 |
as <tomcat_app_dir>.</p> |
|
| 491 |
|
|
| 492 |
<p>If desired, back up your existing war file with a date:</p> |
|
| 493 |
<div class="code">sudo mv <tomcat_app_dir>/knb.war <tomcat_app_dir>/knb.war.<yyyymmdd></div> |
|
| 494 |
|
|
| 495 |
<p>Copy the war file to the Tomcat applications directory:</p> |
|
| 496 |
<div class="code">sudo cp knb.war <tomcat_app_dir></div> |
|
| 497 |
<p>Remove (or rename) the existing application directory:</p> |
|
| 498 |
<div class="code">sudo rm -rf <tomcat_home>/webapps/knb</div> |
|
| 499 |
<p> or </p> |
|
| 500 |
<div class="code">sudo mv <tomcat_home>/webapps/knb <tomcat_home>/webapps/knb.<yyyymmdd></div> |
|
| 501 |
<p>Restart Tomcat:</p> |
|
| 502 |
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div> |
|
| 503 |
<p>Tomcat will expand your war file into a new application directory at startup time.</p> |
|
| 504 |
|
|
| 505 |
<a name="RestartTomcat"></a><div class="header1">Restart Tomcat</div> |
|
| 506 |
<p>Once you have successfully installed Metacat, there is one more step. Tomcat |
|
| 507 |
(and Apache if you have Tomcat integrated with it) must be restarted. To do |
|
| 508 |
this, login as the user that runs your tomcat server (often "tomcat"), |
|
| 509 |
go to <tomcat_home>/bin and type: </p> |
|
| 510 |
|
|
| 511 |
<div class="code">./startup.sh</div> |
|
| 512 |
|
|
| 513 |
<p>In the Tomcat startup messages you should see something in the log file like:</p> |
|
| 514 |
|
|
| 515 |
<div class="code">Metacat: [WARN]: Metacat (1.8.0) initialized. [edu.ucsb.nceas.metacat.MetaCatServlet]</div> |
|
| 516 |
|
|
| 517 |
If you see that message Tomcat has successfully loaded the Metacat servlet. |
|
| 518 |
Next, try to run your new servlet. Go to a web browser and type:</p> |
|
| 519 |
|
|
| 520 |
<div class="code">http://yourserver.yourdomain.com/yourcontext/</div> |
|
| 521 |
|
|
| 522 |
<p>You should substitute your context name for "yourcontext" in the url above. |
|
| 523 |
If everything is working correctly, you should see a query page followed |
|
| 524 |
by an empty result set. Note that if you do not have Tomcat integrated with |
|
| 525 |
Apache you will probably have to type</p> |
|
| 526 |
|
|
| 527 |
<div class="code">http://yourserver.yourdomain.com:8080/yourcontext/</div> |
|
| 528 |
|
|
| 529 |
<a name="UpgradeTroubleshooting"></a><div class="header2">Troubleshooting</div> |
|
| 530 |
<p>If you see something like: |
|
| 531 |
|
|
| 532 |
<div class="code">java.lang.InternalError: Can't connect to X11 window server using 'yourservanme:0.0' as the value of the DISPLAY variable.</div> |
|
| 533 |
|
|
| 534 |
<p>You should add this line: </p> |
|
| 535 |
|
|
| 536 |
<div class="code">JAVA_OPTS="-Djava.awt.headless=true $JAVA_OPTS"</div> |
|
| 537 |
<p>at the first line of the catalina.sh file in the tomcat bin directory. The reason is that |
|
| 538 |
GeoServer uses X11 windows to draw graphics.</p> |
|
| 539 |
|
|
| 540 |
<a name="UpgradeConfigureMetacat"></a><div class="header2">Configure Metacat</div> |
|
| 541 |
<p>Once you see the Metacat configuration screen, you can follow the instructions in the |
|
| 542 |
<a href="./metacatconfigure.html"> Configuring Metacat Section</a> |
|
| 543 |
to complete the internal configuration of Metacat.</p> |
|
| 544 |
|
|
| 545 |
<a name="Registry"></a><div class="header1">Web Based Registry</div> |
|
| 546 |
<p>The registry allows users to upload simple metadata documents directly from the web. See the separate |
|
| 547 |
<a href="registry_installation.html">Registry Installation Guide</a>.</p><br/><br/> |
|
| 548 |
</body> |
|
| 549 |
</html> |
|
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| docs/user/metacat-linux-install.html | ||
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<!-- |
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* '$RCSfile$' |
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* Purpose: web page describing the installation of Metacat |
|
| 4 |
* Copyright: 2000 Regents of the University of California and the |
|
| 5 |
* National Center for Ecological Analysis and Synthesis |
|
| 6 |
* Authors: Chad Berkley |
|
| 7 |
* |
|
| 8 |
* '$Author$' |
|
| 9 |
* '$Date$' |
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* '$Revision$' |
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* |
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* |
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| 13 |
--> |
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<!DOCTYPE html PUBLIC "-//W3C//DTD html 4.0//EN"> |
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<html> |
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<head> |
|
| 19 |
<title>Metacat Linux Installation Instructions</title> |
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| 20 |
<link rel="stylesheet" type="text/css" href="./common.css"> |
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<link rel="stylesheet" type="text/css" href="./default.css"> |
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<body> |
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<table class="tabledefault" width="100%"> |
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<tr><td rowspan="2"><img src="./images/KNBLogo.gif"></td> |
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| 28 |
<td colspan="7"> |
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<div class="title">Metacat Linux Installation Instructions</div> |
|
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</td> |
|
| 31 |
</tr> |
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<tr> |
|
| 33 |
<td><a href="/" class="toollink"> KNB Home </a></td> |
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<td><a href="/data.html" class="toollink"> Data </a></td> |
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<td><a href="/people.html" class="toollink"> People </a></td> |
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<td><a href="/informatics" class="toollink"> Informatics </a></td> |
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<td><a href="/biodiversity" class="toollink"> Biocomplexity </a></td> |
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<td><a href="/education" class="toollink"> Education </a></td> |
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<td><a href="/software" class="toollink"> Software </a></td> |
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</table> |
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<hr> |
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| 43 |
|
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| 44 |
<div class="header1">Table of Contents</div> |
|
| 45 |
<div class="toc"> |
|
| 46 |
<div class="toc1"><a href="#QuickInstallation">Quick Installation</a></div> |
|
| 47 |
<div class="toc2"><a href="#DownloadMetacatInstall">Download Metacat Package</a></div> |
|
| 48 |
<div class="toc2"><a href="#CreateDirs">Create Metacat Directories</a></div> |
|
| 49 |
<div class="toc2"><a href="#InstallJava">Install Java</a></div> |
|
| 50 |
<div class="toc2"><a href="#InstallApache">Install Apache</a></div> |
|
| 51 |
<div class="toc2"><a href="#InstallTomcat">Install Tomcat</a></div> |
|
| 52 |
<div class="toc2"><a href="#InstallPostgres">Install PostgreSQL Database</a></div> |
|
| 53 |
<div class="toc2"><a href="#QuickInstallMetacatWar">Install Metacat War</a></div> |
|
| 54 |
<div class="toc2"><a href="#QuickInstallLsidWar">Install LSID War</a></div> |
|
| 55 |
<div class="toc2"><a href="#ConfigureMetacatInstall">Configure Metacat</a></div> |
|
| 56 |
<div class="toc1"><a href="#QuickUpdate">Quick Update</a></div> |
|
| 57 |
<div class="toc2"><a href="#DownloadMetacatUpdate">Download Metacat Package</a></div> |
|
| 58 |
<div class="toc2"><a href="#BackupApplication">Backup Existing Metacat Installation</a></div> |
|
| 59 |
<div class="toc2"><a href="#QuickUpdateMetacatWar">Update Metacat War</a></div> |
|
| 60 |
<div class="toc2"><a href="#QuickUpdateLsidWar">Update LSID War</a></div> |
|
| 61 |
<div class="toc2"><a href="#ConfigureMetacatUpdate">Configure Metacat</a></div> |
|
| 62 |
<div class="toc1"><a href="#PreInstallation">Pre-Installation</a></div> |
|
| 63 |
<div class="toc2"><a href="#MinRequirements">Minimum Requirements</a></div> |
|
| 64 |
<div class="toc2"><a href="#AdditionalRequiredSoftware">Additional Required Software</a></div> |
|
| 65 |
<div class="toc1"><a href="#AdditionalSoftwareSetup">Additional Software Setup</a></div> |
|
| 66 |
<div class="toc2"><a href="#AdditionalSoftwareJava">Java</a></div> |
|
| 67 |
<div class="toc2"><a href="#AdditionalSoftwareOracle">Oracle</a></div> |
|
| 68 |
<div class="toc2"><a href="#AdditionalSoftwarePostgres">PostgreSQL</a></div> |
|
| 69 |
<div class="toc2"><a href="#AdditionalSoftwareAnt">Ant</a></div> |
|
| 70 |
<div class="toc2"><a href="#AdditionalSoftwareTomcat">Tomcat</a></div> |
|
| 71 |
<div class="toc1"><a href="#DownloadingMetacat">Download Metacat and Get War File</a></div> |
|
| 72 |
<div class="toc2"><a href="#DownloadMetacatBinary">Download Metacat Binary and Create War File</a></div> |
|
| 73 |
<div class="toc2"><a href="#DownloadMetacatSource">Download Metacat Source and Create War File</a></div> |
|
| 74 |
<div class="toc1"><a href="#InstallingMetacat">Installing Metacat</a></div> |
|
| 75 |
<div class="toc2"><a href="#CreateMetacatDirs">Create Metacat Directories</a></div> |
|
| 76 |
<div class="toc2"><a href="#InstallMetacatWar">Install Metacat War</a></div> |
|
| 77 |
<div class="toc1"><a href="#UpgradingMetacat">Upgrading Existing Metacat</a></div> |
|
| 78 |
<div class="toc2"><a href="#UpgradeStopMetacat">Stop the Running Metacat</a></div> |
|
| 79 |
<div class="toc2"><a href="#UpgradeDownloadMetacat">Download Latest Metacat Application</a></div> |
|
| 80 |
<div class="toc2"><a href="#UpgradeMetacatWar">Upgrade Metacat War</a></div> |
|
| 81 |
<div class="toc1"><a href="#RestartTomcat">Restart Tomcat</a></div> |
|
| 82 |
<div class="toc2"><a href="#UpgradeTroubleshooting">Troubleshooting</a></div> |
|
| 83 |
<div class="toc2"><a href="#UpgradeConfigureMetacat">Configure Metacat</a></div> |
|
| 84 |
<div class="toc1"><a href="#Registry">Web Based Registry</a></div> |
|
| 85 |
</div> |
|
| 86 |
|
|
| 87 |
<a name="QuickInstallation"></a><div class="header1">Quick Installation</div> |
|
| 88 |
<p>These are the installation instructions for a system that has Ubuntu 8.04 installed |
|
| 89 |
and has never had Metacat installed on it:</p> |
|
| 90 |
|
|
| 91 |
<a name="DownloadMetacatInstall"></a><div class="header2">Download Metacat Package</div> |
|
| 92 |
<ul> |
|
| 93 |
<li>Browse to the |
|
| 94 |
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
|
| 95 |
In the Metacat section, select the link that looks like: |
|
| 96 |
<div class="code">metacat-bin-X.X.X.tar.gz</div> |
|
| 97 |
where X.X.X is the latest version of Metacat. Choose to save the file locally.</li> |
|
| 98 |
<li>Extract the Metacat package files by typing: |
|
| 99 |
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div></li> |
|
| 100 |
<li>You should see a war file and several supporting files. The location where these files |
|
| 101 |
were extracted will be refered to as the the <metacat_package_dir> for the remainder |
|
| 102 |
of this documentation.</li> |
|
| 103 |
</ul> |
|
| 104 |
|
|
| 105 |
<a name="CreateDirs"></a><div class="header2">Create Metacat Directories</div> |
|
| 106 |
<ul> |
|
| 107 |
<li>Create the metacat utility base directory by typing: |
|
| 108 |
<div class="code">sudo mkdir /var/metacat</div> |
|
| 109 |
<div class="code">sudo chown -R <tomcat_user> /var/metacat</div> |
|
| 110 |
where <tomcat_user> is the user that will start Tomcat. If you are |
|
| 111 |
starting Tomcat as the root user, you do not need to run the chown command.</li> |
|
| 112 |
</ul> |
|
| 113 |
|
|
| 114 |
<a name="InstallJava"></a><div class="header2">Install Java</div> |
|
| 115 |
<ul> |
|
| 116 |
<li>Install Java by typing: |
|
| 117 |
<div class="code">sudo apt-get install sun-java5-jdk</div></li> |
|
| 118 |
<li>hit "ok" then "yes" for license agreement</li> |
|
| 119 |
</ul> |
|
| 120 |
|
|
| 121 |
<a name="InstallApache"></a><div class="header2">Install Apache</div> |
|
| 122 |
<ul> |
|
| 123 |
<li>Install Apache and and Mod JK packages by typing: |
|
| 124 |
<div class="code">sudo apt-get install apache2 libapache2-mod-jk</div></li> |
|
| 125 |
<li>Set up Mod JK apache configuration by typing: |
|
| 126 |
<div class="code">sudo cp <metacat_package_dir>/jk.conf /etc/apache2/mods-available</div> |
|
| 127 |
<div class="code">sudo cp <metacat_package_dir>/workers.properties /etc/apache2</div></li> |
|
| 128 |
<li>Enable Apache Mod JK by typing: |
|
| 129 |
<div class="code">sudo a2dismod jk</div> |
|
| 130 |
<div class="code">sudo a2enmod jk</div></li> |
|
| 131 |
<li>Set up and enable knb (Metacat) site configurations by typing: |
|
| 132 |
<div class="code">sudo cp <metacat_package_dir>/knb /etc/apache2/sites-available</div> |
|
| 133 |
<div class="code">sudo a2ensite knb</div></li> |
|
| 134 |
<li>If you want to run an LSID server along with the Metacat server, set up and enable the authority service site |
|
| 135 |
configurations by typing: |
|
| 136 |
<div class="code">sudo cp <metacat_package_dir>/authority /etc/apache2/sites-available</div> |
|
| 137 |
<div class="code">sudo a2ensite authority</div></li> |
|
| 138 |
<li>Restart apache to bring in changes by typing: |
|
| 139 |
<div class="code">sudo /etc/init.d/apache2 force-reload</div></li> |
|
| 140 |
</ul> |
|
| 141 |
|
|
| 142 |
<a name="InstallTomcat"></a><div class="header2">Install Tomcat</div> |
|
| 143 |
<ul> |
|
| 144 |
<li>Install Tomcat 5.5 by typing: |
|
| 145 |
<div class="code">sudo sudo apt-get install tomcat5.5</div> </li> |
|
| 146 |
<li>Install Metacat friendly Tomcat startup script by typing: |
|
| 147 |
<div class="code">sudo /etc/init.d/tomcat5.5 stop</div> |
|
| 148 |
<div class="code">sudo mv /etc/init.d/tomcat5.5 /etc/init.d/tomcat5.5.bak</div> |
|
| 149 |
<div class="code">sudo cp <metacat_package_dir>/tomcat5.5 /etc/init.d/tomcat5.5</div> |
|
| 150 |
<div class="code">sudo chmod +x /etc/init.d/tomcat5.5</div></li> |
|
| 151 |
</ul> |
|
| 152 |
|
|
| 153 |
<a name="InstallPostgres"></a><div class="header2">Install PostgreSQL Database</div> |
|
| 154 |
<ul> |
|
| 155 |
<li>Install PostgreSQL by typing:</p> |
|
| 156 |
<div class="code">sudo apt-get install postgresql</div></li> |
|
| 157 |
<li>Change to postgres user: |
|
| 158 |
<div class="code">sudo su - postgres</div></li> |
|
| 159 |
<li>Setup empty Metacat database instance editing the postgreSQL configuration file: |
|
| 160 |
<div class="code">gedit /etc/postgresql/8.3/main/pg_hba.conf</div></li> |
|
| 161 |
and adding the following line: |
|
| 162 |
<div class="code">host metacat metacat 127.0.0.1 255.255.255.255 password</div></li> |
|
| 163 |
<li>Save the file, then create the metacat instance: |
|
| 164 |
<div class="code">createdb metacat</div></li> |
|
| 165 |
<li>Log into postgreSQL by typing: |
|
| 166 |
<div class="code">psql metacat</div> |
|
| 167 |
and create the metacat user by typing at the psql prompt: |
|
| 168 |
<div class="code">CREATE USER metacat WITH UNENCRYPTED PASSWORD 'your_password';</div> |
|
| 169 |
where your_password is whatever password you would like for the metacat user.</li> |
|
| 170 |
<li>Exit PostgreSQL by typing |
|
| 171 |
<div class="code">\q</div></li> |
|
| 172 |
<li>Restart the PostgreSQL database to bring in changes: |
|
| 173 |
<div class="code">/etc/init.d/postgresql-8.3 restart</div></li> |
|
| 174 |
<li>Log out of the postgres user account by typing: |
|
| 175 |
<div class="code">logout</div></li> |
|
| 176 |
<li>Test the installation and metacat account by typing: |
|
| 177 |
<div class="code">psql -U metacat -W -h localhost metacat</div></li> |
|
| 178 |
<li>Log back out of postgreSQL: |
|
| 179 |
<div class="code">\q</div></li> |
|
| 180 |
</ul> |
|
| 181 |
|
|
| 182 |
<a name="QuickInstallMetacatWar"></a><div class="header2">Install Metacat War</div> |
|
| 183 |
<ul> |
|
| 184 |
<li>Copy the war file to Tomcat: |
|
| 185 |
<div class="code">sudo cp <metacat_package_dir>/knb.war /usr/share/tomcat5.5/webapps</div></li> |
|
| 186 |
<li>Restart Tomcat: |
|
| 187 |
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div></li> |
|
| 188 |
</ul> |
|
| 189 |
|
|
| 190 |
<a name="QuickInstallLsidWar"></a><div class="header2">Install LSID War</div> |
|
| 191 |
<ul> |
|
| 192 |
<li>If you want to run an LSID server along with the Metacat server, copy the |
|
| 193 |
authority.war file to Tomcat: |
|
| 194 |
<div class="code">sudo cp <metacat_package_dir>/authority.war /usr/share/tomcat5.5/webapps</div></li> |
|
| 195 |
<li>Restart Tomcat: |
|
| 196 |
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div></li> |
|
| 197 |
</ul> |
|
| 198 |
|
|
| 199 |
<a name="ConfigureMetacatInstall"></a><div class="header2">Configure Metacat</div> |
|
| 200 |
<p>Refer to the documentation on <a href="./metacatconfigure.html">Metacat Confguration</a> |
|
| 201 |
to complete your installation of Metacat.</p> |
|
| 202 |
|
|
| 203 |
<a name="QuickUpdate"></a><div class="header1">Quick Update</div> |
|
| 204 |
<p>These are the instructions for a system that already has Metacat installed on it, |
|
| 205 |
but needs a Metacat upgrade:</p> |
|
| 206 |
|
|
| 207 |
<a name="DownloadMetacatUpdate"></a><div class="header2">Download Metacat Package</div> |
|
| 208 |
<ul> |
|
| 209 |
<li>Browse to the |
|
| 210 |
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
|
| 211 |
In the Metacat section, select the link that looks like: |
|
| 212 |
<div class="code">metacat-bin-X.X.X.tar.gz</div> |
|
| 213 |
where X.X.X is the latest version of Metacat. Choose to save the file locally.</li> |
|
| 214 |
<li>Extract the Metacat package files by typing: |
|
| 215 |
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div> |
|
| 216 |
You should see a war file and several supporting files. The location where these files |
|
| 217 |
were extracted will be refered to as the the <metacat_package_dir> for the remainder |
|
| 218 |
of this documentation.</li> |
|
| 219 |
</ul> |
|
| 220 |
|
|
| 221 |
<a name="BackupApplication"></a><div class="header2">Backup Existing Metacat Installation</div> |
|
| 222 |
<ul> |
|
| 223 |
<li>To be safe, it is best to backup the existing Metacat installation. Do so by typing: </p> |
|
| 224 |
<div class="code">cp <web_app_dir>/knb <web_app_dir>/knb.<yyyymmdd></div> |
|
| 225 |
<div class="code">cp <web_app_dir>/knb.war <web_app_dir>/knb.war.<yyyymmdd></div> |
|
| 226 |
Of course, you can use any backup strategy you like (or none at all).</p> |
|
| 227 |
</ul> |
|
| 228 |
|
|
| 229 |
<a name="QuickUpdateMetacatWar"></a><div class="header2">Update Metacat War</div> |
|
| 230 |
<ul> |
|
| 231 |
<li>Copy the war file to Tomcat: |
|
| 232 |
<div class="code">sudo cp knb.war /usr/share/tomcat5.5/webapps</div></li> |
|
| 233 |
<li>Restart Tomcat: |
|
| 234 |
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div></li> |
|
| 235 |
</ul> |
|
| 236 |
|
|
| 237 |
<a name="QuickUpdateLsidWar"></a><div class="header2">Update LSID War</div> |
|
| 238 |
<ul> |
|
| 239 |
<li>If you want to run an LSID server along with the Metacat server, copy the |
|
| 240 |
authority.war file to Tomcat: |
|
| 241 |
<div class="code">sudo cp <metacat_package_dir>/authority.war /usr/share/tomcat5.5/webapps</div></li> |
|
| 242 |
<li>Restart Tomcat: |
|
| 243 |
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div></li> |
|
| 244 |
</ul> |
|
| 245 |
|
|
| 246 |
<a name="ConfigureMetacatUpdate"></a><div class="header2">Configure Metacat</div> |
|
| 247 |
<p>Refer to the documentation on <a href="./metacatconfigure.html">Metacat Confguration</a> |
|
| 248 |
to complete your installation of Metacat.</p> |
|
| 249 |
|
|
| 250 |
<a name="PreInstallation"></a><div class="header1">Pre-Installation</div> |
|
| 251 |
<a name="MinRequirements"></a><div class="header2">Minimum Requirements</div> |
|
| 252 |
<p> |
|
| 253 |
Installing Metacat requires a server running an SQL92 compliant database |
|
| 254 |
(Oracle 8i or Postgresql recommended) with at least 128MB RAM, and a Pentium III class |
|
| 255 |
processor or higher. The amount of disk space required depends on the |
|
| 256 |
size of your RDBMS tablespace (which should be at least 10 MB, |
|
| 257 |
however Metacat itself requires only about 1 MB of free space after |
|
| 258 |
installation). These instructions assume a Linux environment but may |
|
| 259 |
work on other UNIX type environments, however this has not been tested. |
|
| 260 |
</p> |
|
| 261 |
|
|
| 262 |
<a name="AdditionalRequiredSoftware"></a><div class="header2">Additional Required Software</div> |
|
| 263 |
<p> |
|
| 264 |
The server on which you wish to install Metacat must have the following |
|
| 265 |
software installed and running correctly before attempting to install |
|
| 266 |
Metacat. |
|
| 267 |
<ul> |
|
| 268 |
<li><a href="http://www.oracle.com">Oracle 8i</a> (or another SQL92 |
|
| 269 |
compliant RDBMS like Postgres)</li> |
|
| 270 |
<li><a href="http://jakarta.apache.org/ant/index.html">Apache Jakarta-Ant</a> |
|
| 271 |
</li> |
|
| 272 |
<li><a href="http://jakarta.apache.org/tomcat/index.html">Apache Jakarta-Tomcat</a> |
|
| 273 |
<p class="emphasis">Note: For a more robust web serving environment, |
|
| 274 |
Apache web server should |
|
| 275 |
be installed along with Tomcat and the two should be integrated |
|
| 276 |
as described on the Apache web site.</p> |
|
| 277 |
</li> |
|
| 278 |
</ul> |
|
| 279 |
</p> |
|
| 280 |
|
|
| 281 |
<a name="AdditionalSoftwareSetup"></a><div class="header1">Additional Software Setup</div> |
|
| 282 |
<a name="AdditionalSoftwareJava"></a><div class="header2">Java</div> |
|
| 283 |
<p>You'll need a recent Java SDK; J2SE 1.4.2 or later is required. The latest metacat release |
|
| 284 |
has been tested most extensively with <a href="http://java.sun.com/j2se/1.5.0/">J2SE 5.0</a> |
|
| 285 |
and this is the recommended version. |
|
| 286 |
Make sure that JAVA_HOME environment variable is properly set and that both |
|
| 287 |
java and javac are on your PATH. |
|
| 288 |
</p> |
|
| 289 |
<a name="AdditionalSoftwareOracle"></a><div class="header2">Oracle 8i</div> |
|
| 290 |
<p>The Oracle RDBMS must be installed and running as a daemon on the system. |
|
| 291 |
In addition the JDBC listener must be enabled. You can enable it by |
|
| 292 |
logging in as your Oracle user and typing the following:</p> |
|
| 293 |
|
|
| 294 |
<div class="code">lsnrctl start</div> |
|
| 295 |
|
|
| 296 |
<p>Your instance should have a table space of at least 5 MB (10 MB or higher |
|
| 297 |
recommended). You should also have a username specific to Metacat |
|
| 298 |
created and enabled. This user must have most normal permissions |
|
| 299 |
including CREATE SESSION, CREATE TABLE, CREATE INDEX, CREATE TRIGGER, |
|
| 300 |
EXECUTE PROCEDURE, EXECUTE TYPE, etc. If an action is unexplainably |
|
| 301 |
rejected by Metacat it is probably because the user permissions are not |
|
| 302 |
correctly set.</p> |
|
| 303 |
|
|
| 304 |
<a name="AdditionalSoftwarePostgreSQL"></a><div class="header2">PostgreSQL</div> |
|
| 305 |
<p>PostgreSQL can be easily installed on most linux distributions and on |
|
| 306 |
Windows (using cygwin) and Mac OS X. Using Fedora Core or RedHat Linux, |
|
| 307 |
you can install the rpms for postgres and then run </p> |
|
| 308 |
|
|
| 309 |
<div class="code">/etc/init.d/postgresql start</div> |
|
| 310 |
|
|
| 311 |
<p>in order to start the database. |
|
| 312 |
On Ubuntu and other Debian-based Linux distributions, you can use the apt-get command |
|
| 313 |
to install postgres: |
|
| 314 |
<div class="code">sudo apt-get install postgresql-8.0</div> and |
|
| 315 |
then run |
|
| 316 |
<div class="code">/etc/init.d/postgresql-8.0 start</div> to start. |
|
| 317 |
|
|
| 318 |
This initializes the data files. You need to do a bit of configuration |
|
| 319 |
to create a database and set up a user account and allow internet access |
|
| 320 |
via jdbc. See the postgres documentation for this, but here is a quick |
|
| 321 |
start: |
|
| 322 |
<ul> |
|
| 323 |
<li>Switch to the "postgres" user account |
|
| 324 |
<div class="code">sudo su - postgres</div></li> |
|
| 325 |
<li>Edit "data/pg_hba.conf", adding the following line to the file:<br> |
|
| 326 |
<div class="code">host metacat metacat 127.0.0.1 255.255.255.255 password</div> |
|
| 327 |
If your host uses IPv6 addresses, you may need this line instead: |
|
| 328 |
<div class="code">host metacat metacat ::1 ffff:ffff:ffff:ffff:ffff:ffff:ffff:ffff password</div></li> |
|
| 329 |
<li>If you are using Postgresql pre-8.0, you must edit the "data/postgres.conf" file and uncomment and edit the line |
|
| 330 |
starting with "tcpip_socket" so that it reads |
|
| 331 |
<div class="code">tcpip_socket = true</div></li> |
|
| 332 |
<li>Create metacat database by typing: |
|
| 333 |
<div class="code">createdb metacat</div></li> |
|
| 334 |
<li>Log in using the postgres account and create a new "metacat" user account by typing: |
|
| 335 |
<div class="code">psql metacat</div> |
|
| 336 |
<ul> |
|
| 337 |
<li>In postgres, run <div class="code">CREATE USER metacat WITH UNENCRYPTED PASSWORD 'apasswordyoulike';</div></li> |
|
| 338 |
<li>This creates a new account called metacat on the database named metacat</li> |
|
| 339 |
<li>Note: there are many ways to do this, so others such as using |
|
| 340 |
ENCRYPTED passwords will work fine.</li> |
|
| 341 |
</ul> |
|
| 342 |
</li> |
|
| 343 |
<li>Exit the postgres account back to root and restart the postgres |
|
| 344 |
database by typing: |
|
| 345 |
<div class="code">/etc/init.d/postgresql restart</div></li> |
|
| 346 |
<li>Test logging into the postgres db using the metacat account with |
|
| 347 |
the following command: |
|
| 348 |
<div class="code">psql -U metacat -W -h localhost metacat</div></li> |
|
| 349 |
</ul> |
|
| 350 |
</p> |
|
| 351 |
|
|
| 352 |
<a name="AdditionalSoftwareAnt"></a><div class="header2">Ant</div> |
|
| 353 |
<p> |
|
| 354 |
Ant is a Java based build application similar to Make on UNIX systems. |
|
| 355 |
It takes in installation parameters from a file in the root installation |
|
| 356 |
directory named "build.xml". The Metacat CVS module contains a default |
|
| 357 |
build.xml file that may require some modification upon installation. Ant |
|
| 358 |
should be installed on the system and the "ant" executable shell script |
|
| 359 |
should be available in the users path. The latest metacat release was tested with |
|
| 360 |
Ant 1.6.5. <!-- We note that the current build is |
|
| 361 |
not working with Ant 1.6.x, so you'll need to use an earler version. We have |
|
| 362 |
successfully used Ant 1.5.1, 1.5.2, and some earlier versions. --> |
|
| 363 |
</p> |
|
| 364 |
|
|
| 365 |
<a name="AdditionalSoftwareTomcat"></a><div class="header2">Tomcat</div> |
|
| 366 |
<p> |
|
| 367 |
Install Tomcat into the directory of your choice. The directory in which |
|
| 368 |
you install Tomcat itself will be referred to as the <tomcat_home>. |
|
| 369 |
We recommend that you install Tomcat version 5.5. If you are running |
|
| 370 |
Ubuntu/Debian, you can get Tomcat by typing:</p> |
|
| 371 |
<div class="code">sudo apt-get install tomcat5.5</div> |
|
| 372 |
Otherwise, you can get Tomcat from <a href=" http://jakarta.apache.org/tomcat/index.html">the Apache Tomcat page</a>. |
|
| 373 |
</p> |
|
| 374 |
|
|
| 375 |
<a name="DownloadingMetacat"></a><div class="header1">Download Metacat and Get War File</div> |
|
| 376 |
<p>There are several ways to wind up with a Metacat war file, which is needed for |
|
| 377 |
installation. These are: </p> |
|
| 378 |
<ul> |
|
| 379 |
<li>Download Metacat binary distribution - which will have a pre-built war file.</li> |
|
| 380 |
<li>Download Metacat source distribution - which will then need to be built in order to create a war file.</li> |
|
| 381 |
<li>Download Metacat source from SVN - which will then need to be built in order to create a war file.</li> |
|
| 382 |
</ul> |
|
| 383 |
<p>Since downloading the binary distribution is the easiest and most common install, it |
|
| 384 |
will be discussed here in detail. Links to source download/build instructions are also |
|
| 385 |
included in case you would like to go that route.</p> |
|
| 386 |
<a name="DownloadMetacatBinary"></a><div class="header2">Download Metacat Binary and Create War File</div> |
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| 387 |
|
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<p>Browse to the |
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| 389 |
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
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In the Metacat section, for Linux based systems, select the link that looks like:</p> |
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<div class="code">metacat-bin-X.X.X.tar.gz</div> |
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| 392 |
<p>for Windows systems, select the link that looks like:</p> |
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<div class="code">metacat-bin-X.X.X.zip</div> |
|
| 394 |
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p> |
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<p>Extract the Metacat package files on Linux systems by typing: |
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| 396 |
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div> |
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| 397 |
<p>or, on Windows, use your system unzip utility to extract the zip file.</p> |
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<p>You should see a war file and several supporting files. The location where these files |
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| 399 |
were extracted will be refered to as the the <metacat_package_dir> for the remainder |
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| 400 |
of this documentation. |
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|
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| 402 |
<a name="DownloadMetacatSource"></a><div class="header2">Download Metacat Source and Create War File</div> |
|
| 403 |
|
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| 404 |
<p>If you would like to download the Metacat source distribution or checkout the source |
|
| 405 |
code from SVN, go to the |
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| 406 |
<a href="./metacat-source-build.html">Download and Build Metacat From Source</a> page. |
|
| 407 |
|
|
| 408 |
<a name="InstallingMetacat"></a><div class="header1">Installing Metacat</div> |
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<p>This section is only for a new installation. If you are upgrading an existing Metacat, please skip |
|
| 410 |
this section and go to the next one - <a href="#UpgradingMetacat">Upgrading Existing Metacat</a></p> |
|
| 411 |
|
|
| 412 |
<p>Tomcat will look for it's application files (war files) in a configured directory. |
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| 413 |
This is typically the <tomcat_home>/webapps directory, but your instance of Tomcat may |
|
| 414 |
be configured to look in a different directory. We will refer to your Tomcat application directory |
|
| 415 |
as <tomcat_app_dir>.</p> |
|
| 416 |
|
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<a name="CreateMetacatDirs"></a><div class="header2">Create Metacat Directories</div> |
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<p>Metacat uses a base directory to store such things as store data and metadata, |
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| 419 |
temporary files and configuration backups. This directory should be outside of the |
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Tomcat application directory since the application directory gets wiped out during an |
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| 421 |
upgrade. Create the metacat utility base directory |
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| 422 |
by typing:</p> |
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<div class="code">sudo mkdir <metacat_base_dir></div> |
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<p>(Typically <metacat_base_dir> is '/var/metacat'.) Remeber the directory you |
|
| 425 |
choose, since you will be asked to configure Metacat to point to it after startup.</p> |
|
| 426 |
|
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<p>Change the ownership of the directory by typing:</p> |
|
| 428 |
<div class="code">sudo chown -R <tomcat_user> /var/metacat</div> |
|
| 429 |
<p>where <tomcat_user> is the user that will start Tomcat. If you are |
|
| 430 |
starting Tomcat as the root user, you do not need to run the chown command.</p> |
|
| 431 |
|
|
| 432 |
<a name="InstallMetacatWar"></a><div class="header2">Install Metacat War</div> |
|
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<p>Copy the war file to Tomcat:</p> |
|
| 434 |
<div class="code">sudo cp knb.war <tomcat_app_dir></div> |
|
| 435 |
|
|
| 436 |
<a name="ApacheConfig"></a><div class="header2">Configure Apache</div> |
|
| 437 |
<p>You have the option of running Tomcat stand-alone or with with the Apache web |
|
| 438 |
server. Running with Apache is the more traditional setup since Apache is a |
|
| 439 |
more robust web server. There are some initial setup steps to get Apache talking |
|
| 440 |
to the Metacat application at the </p> |
|
| 441 |
<a href="./metacat-apache-config.html"> the Metacat Apache Configuration page</a></p> |
|
| 442 |
|
|
| 443 |
<a name="UpgradingMetacat"></a><div class="header1">Upgrading Existing Metacat</div> |
|
| 444 |
<a name="protocol"></a> |
|
| 445 |
<p>The following instructions are for upgrading an existing Metacat. |
|
| 446 |
|
|
| 447 |
<a name="UpgradeStopMetacat"></a><div class="header2">Stop the Running Metacat</div> |
|
| 448 |
<p>To do this, login as the user that runs your tomcat server (often "tomcat"), |
|
| 449 |
go to <tomcat_home>/bin and type:</p> |
|
| 450 |
|
|
| 451 |
<div class="code">./shutdown.sh</div> |
|
| 452 |
|
|
| 453 |
<a name="UpgradeDownloadMetacat"></a><div class="header2">Download Latest Metacat Application</div> |
|
| 454 |
<p>Browse to the |
|
| 455 |
<a href="http://knb.ecoinformatics.org/software/download.html">KNB Software Download Page</a>. |
|
| 456 |
In the Metacat section, select the link that looks like:</p> |
|
| 457 |
<div class="code">metacat-bin-X.X.X.tar.gz</div> |
|
| 458 |
<p>where X.X.X is the latest version of Metacat. Choose to save the file locally.</p> |
|
| 459 |
<p>Extract the Metacat package files by typing:</p> |
|
| 460 |
<div class="code">tar -xvzf metacat-bin-X.X.X.tar.gz</div> |
|
| 461 |
<p>You should see several files:</p> |
|
| 462 |
|
|
| 463 |
<ul> |
|
| 464 |
<li>knb.war - the Metacat application web archive file.</li> |
|
| 465 |
<li>knb - the web definition file used by Apache on ubuntu/debian Linux systems.</li> |
|
| 466 |
<li>jk.conf - the JkMount configuration file used by Apache on ubuntu/debian Linux systems.</li> |
|
| 467 |
<li>workers.properties - the workers definition file used by Apache on ubuntu/debian Linux systems.</li> |
|
| 468 |
<li>tomcat5.5 - the Tomcat startup script for Tomcat 5.5 installed with apt-get on ubuntu/debian Linux systems.</li> |
|
| 469 |
<li>authority - the optional LSID Server application web archive file.</li> |
|
| 470 |
</ul> |
|
| 471 |
|
|
| 472 |
<p>The location where these files |
|
| 473 |
were extracted will be refered to as the the <metacat_package_dir> for the remainder |
|
| 474 |
of this documentation.</p> |
|
| 475 |
|
|
| 476 |
<a name="UpgradeMetacatWar"></a><div class="header2">Upgrade Metacat War</div> |
|
| 477 |
<p>Tomcat will look for it's application files (war files) in a configured directory. |
|
| 478 |
This is typically the <tomcat_home>/webapps directory, but your instance of Tomcat may |
|
| 479 |
be configured to look in a different directory. We will refer to your Tomcat application directory |
|
| 480 |
as <tomcat_app_dir>.</p> |
|
| 481 |
|
|
| 482 |
<p>If desired, back up your existing war file with a date:</p> |
|
| 483 |
<div class="code">sudo mv <tomcat_app_dir>/knb.war <tomcat_app_dir>/knb.war.<yyyymmdd></div> |
|
| 484 |
|
|
| 485 |
<p>Copy the war file to the Tomcat applications directory:</p> |
|
| 486 |
<div class="code">sudo cp knb.war <tomcat_app_dir></div> |
|
| 487 |
<p>Remove (or rename) the existing application directory:</p> |
|
| 488 |
<div class="code">sudo rm -rf <tomcat_home>/webapps/knb</div> |
|
| 489 |
<p> or </p> |
|
| 490 |
<div class="code">sudo mv <tomcat_home>/webapps/knb <tomcat_home>/webapps/knb.<yyyymmdd></div> |
|
| 491 |
<p>Restart Tomcat:</p> |
|
| 492 |
<div class="code">sudo /etc/init.d/tomcat5.5 restart</div> |
|
| 493 |
<p>Tomcat will expand your war file into a new application directory at startup time.</p> |
|
| 494 |
|
|
| 495 |
<a name="RestartTomcat"></a><div class="header1">Restart Tomcat</div> |
|
| 496 |
<p>Once you have successfully installed Metacat, there is one more step. Tomcat |
|
| 497 |
(and Apache if you have Tomcat integrated with it) must be restarted. To do |
|
| 498 |
this, login as the user that runs your tomcat server (often "tomcat"), |
|
| 499 |
go to <tomcat_home>/bin and type: </p> |
|
| 500 |
|
|
| 501 |
<div class="code">./startup.sh</div> |
|
| 502 |
|
|
| 503 |
<p>In the Tomcat startup messages you should see something in the log file like:</p> |
|
| 504 |
|
|
| 505 |
<div class="code">Metacat: [WARN]: Metacat (1.8.0) initialized. [edu.ucsb.nceas.metacat.MetaCatServlet]</div> |
|
| 506 |
|
|
| 507 |
If you see that message Tomcat has successfully loaded the Metacat servlet. |
|
| 508 |
Next, try to run your new servlet. Go to a web browser and type:</p> |
|
| 509 |
|
|
| 510 |
<div class="code">http://yourserver.yourdomain.com/yourcontext/</div> |
|
| 511 |
|
|
| 512 |
<p>You should substitute your context name for "yourcontext" in the url above. |
|
| 513 |
If everything is working correctly, you should see a query page followed |
|
| 514 |
by an empty result set. Note that if you do not have Tomcat integrated with |
|
| 515 |
Apache you will probably have to type</p> |
|
| 516 |
|
|
| 517 |
<div class="code">http://yourserver.yourdomain.com:8080/yourcontext/</div> |
|
| 518 |
|
|
| 519 |
<a name="UpgradeTroubleshooting"></a><div class="header2">Troubleshooting</div> |
|
| 520 |
<p>If you see something like: |
|
| 521 |
|
|
| 522 |
<div class="code">java.lang.InternalError: Can't connect to X11 window server using 'yourservanme:0.0' as the value of the DISPLAY variable.</div> |
|
| 523 |
|
|
| 524 |
<p>You should add this line: </p> |
|
| 525 |
|
|
| 526 |
<div class="code">JAVA_OPTS="-Djava.awt.headless=true $JAVA_OPTS"</div> |
|
| 527 |
<p>at the first line of the catalina.sh file in the tomcat bin directory. The reason is that |
|
| 528 |
GeoServer uses X11 windows to draw graphics.</p> |
|
| 529 |
|
|
| 530 |
<a name="UpgradeConfigureMetacat"></a><div class="header2">Configure Metacat</div> |
|
| 531 |
<p>Once you see the Metacat configuration screen, you can follow the instructions in the |
|
| 532 |
<a href="./metacatconfigure.html"> Configuring Metacat Section</a> |
|
| 533 |
to complete the internal configuration of Metacat.</p> |
|
| 534 |
|
|
| 535 |
<a name="Registry"></a><div class="header1">Web Based Registry</div> |
|
| 536 |
<p>The registry allows users to upload simple metadata documents directly from the web. See the separate |
|
| 537 |
<a href="registry_installation.html">Registry Installation Guide</a>.</p><br/><br/> |
|
| 538 |
</body> |
|
| 539 |
</html> |
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| 0 | 540 | |
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